| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996015
Identifier: 39996015
GI number: 39996015
Start: 977215
End: 977940
Strand: Reverse
Name: 39996015
Synonym: GSU0912
Alternate gene names: NA
Gene position: 977940-977215 (Counterclockwise)
Preceding gene: 39996019
Following gene: 39996014
Centisome position: 25.64
GC content: 66.12
Gene sequence:
>726_bases ATGAATCAGTCAACGCGCATCGTCGTCGGCATCATATCCCTGTTCCTGTCGCTGTTCCTGGCCTGGCGCATCGGCATCTG GCTGGAGCCGGCCCCGGCCGGGCCATCCCTGCCGGCGGGCGACCCGAAATCGCCCCCCTACGCCACCGGGACGGTGCAGG AGGACCTTCACTTCGAAATCCGCAACGTCCGCATCTCCGGGGATGGGGCCACCCTGAACGGGATCGGCATCATCCGGTTC GATACCGACCGGGAGCGGATCAAGCCGGCGGTGCTGGCAATGCTCACGGCCGTGAAGAAAAAGACCCCGGCAGCGAAGAT GATAACCCTTGAGCTCAAGCCCGCCGTGGAGTGCACCCAGTGCACCCTGGCCAGGGCAACGTACCGTGAGGGCCGGACCG TCATCCGCTACGGGATCCCCTCCCAGGAACAGATCGAGCGACACAACGCACTCATCGGCACCACTGACGGTACCGGACGC CGGATCGACCGCCCCCGGCTCTACCGCCCCGACAAGGAGACCTTCGGGGCCGGGTTGGCCGTCACCATGGCCCTGGAGGC GGCACGGCAGAAGAACCCGTCGGCTGGCGAGGAGCAACTGCTCGACCAGGCAGCCGCGACGGTGGGCATCTCCCCGGTGG TGGCGGCACGTCACCGCGACTTCATGAAAGCCTATTTCACGGGCGACGGCTATGGGGAGGAAACCCTGGACACACCGCTC CAATGA
Upstream 100 bases:
>100_bases AATCCTCCACTGGCACCCGGGCCATTTGCATTGGCGACAATCCCCGGTACCATTGACAATTATCACGAACGAGCGGACCC GACCCCTCGCCCGGAGAACC
Downstream 100 bases:
>100_bases CGCAAACCGAGTGGGAGTTTCCAGTTACCGCGACTCCCCGGCATCCCCCTAAAGGAGGGTCACCATGCAGAAGCTGATCC GCGTCGAGCCGGCCAAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MNQSTRIVVGIISLFLSLFLAWRIGIWLEPAPAGPSLPAGDPKSPPYATGTVQEDLHFEIRNVRISGDGATLNGIGIIRF DTDRERIKPAVLAMLTAVKKKTPAAKMITLELKPAVECTQCTLARATYREGRTVIRYGIPSQEQIERHNALIGTTDGTGR RIDRPRLYRPDKETFGAGLAVTMALEAARQKNPSAGEEQLLDQAAATVGISPVVAARHRDFMKAYFTGDGYGEETLDTPL Q
Sequences:
>Translated_241_residues MNQSTRIVVGIISLFLSLFLAWRIGIWLEPAPAGPSLPAGDPKSPPYATGTVQEDLHFEIRNVRISGDGATLNGIGIIRF DTDRERIKPAVLAMLTAVKKKTPAAKMITLELKPAVECTQCTLARATYREGRTVIRYGIPSQEQIERHNALIGTTDGTGR RIDRPRLYRPDKETFGAGLAVTMALEAARQKNPSAGEEQLLDQAAATVGISPVVAARHRDFMKAYFTGDGYGEETLDTPL Q >Mature_241_residues MNQSTRIVVGIISLFLSLFLAWRIGIWLEPAPAGPSLPAGDPKSPPYATGTVQEDLHFEIRNVRISGDGATLNGIGIIRF DTDRERIKPAVLAMLTAVKKKTPAAKMITLELKPAVECTQCTLARATYREGRTVIRYGIPSQEQIERHNALIGTTDGTGR RIDRPRLYRPDKETFGAGLAVTMALEAARQKNPSAGEEQLLDQAAATVGISPVVAARHRDFMKAYFTGDGYGEETLDTPL Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26302; Mature: 26302
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSTRIVVGIISLFLSLFLAWRIGIWLEPAPAGPSLPAGDPKSPPYATGTVQEDLHFEI CCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE RNVRISGDGATLNGIGIIRFDTDRERIKPAVLAMLTAVKKKTPAAKMITLELKPAVECTQ EEEEECCCCCEEECEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHH CTLARATYREGRTVIRYGIPSQEQIERHNALIGTTDGTGRRIDRPRLYRPDKETFGAGLA HHHHHHHHHCCCEEEEECCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHCCCHH VTMALEAARQKNPSAGEEQLLDQAAATVGISPVVAARHRDFMKAYFTGDGYGEETLDTPL HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCC Q C >Mature Secondary Structure MNQSTRIVVGIISLFLSLFLAWRIGIWLEPAPAGPSLPAGDPKSPPYATGTVQEDLHFEI CCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE RNVRISGDGATLNGIGIIRFDTDRERIKPAVLAMLTAVKKKTPAAKMITLELKPAVECTQ EEEEECCCCCEEECEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHH CTLARATYREGRTVIRYGIPSQEQIERHNALIGTTDGTGRRIDRPRLYRPDKETFGAGLA HHHHHHHHHCCCEEEEECCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHCCCHH VTMALEAARQKNPSAGEEQLLDQAAATVGISPVVAARHRDFMKAYFTGDGYGEETLDTPL HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA