| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995946
Identifier: 39995946
GI number: 39995946
Start: 896965
End: 897363
Strand: Reverse
Name: 39995946
Synonym: GSU0840
Alternate gene names: NA
Gene position: 897363-896965 (Counterclockwise)
Preceding gene: 39995947
Following gene: 39995943
Centisome position: 23.53
GC content: 60.15
Gene sequence:
>399_bases ATGGATGTGCTTTTCTACGCCCCCGAAAGAGTTGGCGAGGATATTCGAAAAACGGTTTCGGGGGTTATTCCCGGCCTTGA GGTGTATCGATCAATGGCAGCGCTCGCTGAACGGTTCCGGCGGATACTGGAGCAACCCGCGATCACCGTTCTGGTAGTTC GGGACAGGGATGAGCTGGAACGCCTGCTTACCATGCGAACCGCTTTCCGGGACACAAAGACCGTCCTGGTTCTCCCCGAC AGGCGAGCCGAGACGGTCTCCCGGGGGCACTGCCTGGAACCGCGATTCATGACGTACCTGGACCAGAACCCGGCGGAGGT GGTTGCCGTGCTTGCCAGAATGGCGAGTCCGGGTAACGGACCCGGGAATCCTTCAAGGAGACAGGCATCGCTGCCGTAG
Upstream 100 bases:
>100_bases TATCTATTTGATATTAATAGACAATCAACATCACGCCTTTCTGGCACAGGCCGTGCTTTAGCGTCATTGAATACTCAGAC ACGGAGCGAGGTTATTGCCT
Downstream 100 bases:
>100_bases CGGCTGCGGGAACGCACTGAAGGCGAGGAGGCCGGGATATGGAAGTGAACGACAGGGTGCGCACCGTTGATCCGTCCGGG CCCGGAACCTGCTGGACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MDVLFYAPERVGEDIRKTVSGVIPGLEVYRSMAALAERFRRILEQPAITVLVVRDRDELERLLTMRTAFRDTKTVLVLPD RRAETVSRGHCLEPRFMTYLDQNPAEVVAVLARMASPGNGPGNPSRRQASLP
Sequences:
>Translated_132_residues MDVLFYAPERVGEDIRKTVSGVIPGLEVYRSMAALAERFRRILEQPAITVLVVRDRDELERLLTMRTAFRDTKTVLVLPD RRAETVSRGHCLEPRFMTYLDQNPAEVVAVLARMASPGNGPGNPSRRQASLP >Mature_132_residues MDVLFYAPERVGEDIRKTVSGVIPGLEVYRSMAALAERFRRILEQPAITVLVVRDRDELERLLTMRTAFRDTKTVLVLPD RRAETVSRGHCLEPRFMTYLDQNPAEVVAVLARMASPGNGPGNPSRRQASLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14863; Mature: 14863
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLFYAPERVGEDIRKTVSGVIPGLEVYRSMAALAERFRRILEQPAITVLVVRDRDELE CCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH RLLTMRTAFRDTKTVLVLPDRRAETVSRGHCLEPRFMTYLDQNPAEVVAVLARMASPGNG HHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCC PGNPSRRQASLP CCCCCCCCCCCC >Mature Secondary Structure MDVLFYAPERVGEDIRKTVSGVIPGLEVYRSMAALAERFRRILEQPAITVLVVRDRDELE CCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH RLLTMRTAFRDTKTVLVLPDRRAETVSRGHCLEPRFMTYLDQNPAEVVAVLARMASPGNG HHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCC PGNPSRRQASLP CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA