| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995927
Identifier: 39995927
GI number: 39995927
Start: 881364
End: 881972
Strand: Reverse
Name: 39995927
Synonym: GSU0821
Alternate gene names: NA
Gene position: 881972-881364 (Counterclockwise)
Preceding gene: 39995928
Following gene: 39995924
Centisome position: 23.12
GC content: 58.29
Gene sequence:
>609_bases ATGACCCACCAGATCGACGAACTGATCCGCAGGATAAAAGAGCTGCAAGAGGAATTGGAAACGGAGTTCAAACAGAAGCG GGAGGAATTCCAGTTTGTCATCGAAAAGAAGCGGATCCGCTTCGCCGAAGAGGTGGCCCGGCAGCAGCGTCGCCTGAAAA CGGGACTCTTTCGCTACCTGATCGAGGCGCGCCCCCTGAACATCCTCACCGCGCCGATCATCTACGCCGGGTTCATCCCG TTCATGGCGCTGGATCTCTTTCTCTTCATCTACCAGGCCATCTGCTTCCCGGTTTACGGCATTCCGAAAGTGAAGCGCGC CGACTACCTGATCTTCGACCGGGAGGATCTCCCCTACCTGAACATCATCGAAAAGTTCAACTGCTTCTACTGCTCCTACG GCAACGGGCTGGCCGCCTACGCGCGGGAGATTTCAGCCCGCACCGAGCAGTACTGGTGCCCCATCAAACACGCCCGCAGG ATCAAGGCGGCCCATGACCGCTATCCCCGCTTTTTCGAGTTCGGCGATGCCGAAAGCTTCAGCAAGGGGCTGGAGCGTCT CCGGCAGGAACTGGAAAAGGAACGGGAACAGGGCGAAGAGCGCCGCTGA
Upstream 100 bases:
>100_bases TCCGCTCCCGCCCGATTAACCGGTGGACTTATGGCGAGAGTACGGCTATGGTCAGCAGGGCCAGGGTGCAGAATCACACG GGGAGAACAGGGAGAGCTTG
Downstream 100 bases:
>100_bases GCCCGGCCACTGGCGGGCTGTCGATCACCAGGGGCGCCAGAGATACATGAACTGGCCGCCGCCAGTCATGTCGAACCCGC CCAGCAGGTCCGCCATGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTHQIDELIRRIKELQEELETEFKQKREEFQFVIEKKRIRFAEEVARQQRRLKTGLFRYLIEARPLNILTAPIIYAGFIP FMALDLFLFIYQAICFPVYGIPKVKRADYLIFDREDLPYLNIIEKFNCFYCSYGNGLAAYAREISARTEQYWCPIKHARR IKAAHDRYPRFFEFGDAESFSKGLERLRQELEKEREQGEERR
Sequences:
>Translated_202_residues MTHQIDELIRRIKELQEELETEFKQKREEFQFVIEKKRIRFAEEVARQQRRLKTGLFRYLIEARPLNILTAPIIYAGFIP FMALDLFLFIYQAICFPVYGIPKVKRADYLIFDREDLPYLNIIEKFNCFYCSYGNGLAAYAREISARTEQYWCPIKHARR IKAAHDRYPRFFEFGDAESFSKGLERLRQELEKEREQGEERR >Mature_201_residues THQIDELIRRIKELQEELETEFKQKREEFQFVIEKKRIRFAEEVARQQRRLKTGLFRYLIEARPLNILTAPIIYAGFIPF MALDLFLFIYQAICFPVYGIPKVKRADYLIFDREDLPYLNIIEKFNCFYCSYGNGLAAYAREISARTEQYWCPIKHARRI KAAHDRYPRFFEFGDAESFSKGLERLRQELEKEREQGEERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24426; Mature: 24294
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHQIDELIRRIKELQEELETEFKQKREEFQFVIEKKRIRFAEEVARQQRRLKTGLFRYL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEARPLNILTAPIIYAGFIPFMALDLFLFIYQAICFPVYGIPKVKRADYLIFDREDLPYL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHH NIIEKFNCFYCSYGNGLAAYAREISARTEQYWCPIKHARRIKAAHDRYPRFFEFGDAESF HHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCHHHH SKGLERLRQELEKEREQGEERR HHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure THQIDELIRRIKELQEELETEFKQKREEFQFVIEKKRIRFAEEVARQQRRLKTGLFRYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEARPLNILTAPIIYAGFIPFMALDLFLFIYQAICFPVYGIPKVKRADYLIFDREDLPYL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHH NIIEKFNCFYCSYGNGLAAYAREISARTEQYWCPIKHARRIKAAHDRYPRFFEFGDAESF HHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCHHHH SKGLERLRQELEKEREQGEERR HHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA