Click here to switch to the map view.

The map label for this gene is yccM [C]

Identifier: 39995835

GI number: 39995835

Start: 777108

End: 777701

Strand: Reverse

Name: yccM [C]

Synonym: GSU0729

Alternate gene names: 39995835

Gene position: 777701-777108 (Counterclockwise)

Preceding gene: 39995836

Following gene: 39995833

Centisome position: 20.39

GC content: 68.69

Gene sequence:

>594_bases
ATGATCCTCACCATCGCTGTCGGCTGGCGCTACCCCCTCGTGGGATTCGTCGTGCCCGCAGCCATGGCGGCCTCCATCGC
CGGCAGCTTCTTCAGGGGGCGGTACGTGTGCGGCAATTTCTGCCCGCGGGGAAGCTTCTTCGATACCCTGTTCCGGCTGG
TGGGGGGCCCCCGCGACGTCCCCGCGTTCCTGCGCGGCTCAGCCTTCCGCTGGACCTTTCTCGCGCTCCTCATGGGATTT
CTGGGGTGGCAGATCTCCCGCGACCCCGCCGACCCGGCCCACTGGGGCTTCGTCTTCTGGATGGCCTGCGCCCTGACCAC
CGGCATCGGCATCGTCCTGGGCCTCGCCTTCCGGGCCCGCACCTGGTGCCTGGTCTGCCCGGTGGGGACCATGTCGAACG
CCATCGGCGGCGGAAATTGGCAGATGACCATCGCGGAATCGTGCGTCGGCTGCGGCTCCTGCGAGCGTCACTGTCCCATG
GGGCTTACCATCGCGGCCCACCGGCAGGATGGAACTCTCCCCCACCGGGACTGCCTCAAGTGCTCGTCCTGCGTGGACGC
CTGCCCCAAGGATGCCCTCGGCTGGCCGTCCTGA

Upstream 100 bases:

>100_bases
CACGGAGGACGACTCTCTCATGGAGCACATGGACGGCGCCATCTCCCTTCCCTTCCAGAAACCGGTTGCGGCCACCCATC
GCTGGGCGCTGGCCCTGATC

Downstream 100 bases:

>100_bases
AAAGAGGTTGGCAGCTATAAAACTGCCTCGATCCGCTCGCAGAGCGTCCGCAGCACCTTGATCCGGGCATACTGCTTGTT
CTCGGCTTCCACAAGGGTCC

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: Ferredoxin

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MILTIAVGWRYPLVGFVVPAAMAASIAGSFFRGRYVCGNFCPRGSFFDTLFRLVGGPRDVPAFLRGSAFRWTFLALLMGF
LGWQISRDPADPAHWGFVFWMACALTTGIGIVLGLAFRARTWCLVCPVGTMSNAIGGGNWQMTIAESCVGCGSCERHCPM
GLTIAAHRQDGTLPHRDCLKCSSCVDACPKDALGWPS

Sequences:

>Translated_197_residues
MILTIAVGWRYPLVGFVVPAAMAASIAGSFFRGRYVCGNFCPRGSFFDTLFRLVGGPRDVPAFLRGSAFRWTFLALLMGF
LGWQISRDPADPAHWGFVFWMACALTTGIGIVLGLAFRARTWCLVCPVGTMSNAIGGGNWQMTIAESCVGCGSCERHCPM
GLTIAAHRQDGTLPHRDCLKCSSCVDACPKDALGWPS
>Mature_197_residues
MILTIAVGWRYPLVGFVVPAAMAASIAGSFFRGRYVCGNFCPRGSFFDTLFRLVGGPRDVPAFLRGSAFRWTFLALLMGF
LGWQISRDPADPAHWGFVFWMACALTTGIGIVLGLAFRARTWCLVCPVGTMSNAIGGGNWQMTIAESCVGCGSCERHCPM
GLTIAAHRQDGTLPHRDCLKCSSCVDACPKDALGWPS

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21278; Mature: 21278

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTIAVGWRYPLVGFVVPAAMAASIAGSFFRGRYVCGNFCPRGSFFDTLFRLVGGPRDV
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
PAFLRGSAFRWTFLALLMGFLGWQISRDPADPAHWGFVFWMACALTTGIGIVLGLAFRAR
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TWCLVCPVGTMSNAIGGGNWQMTIAESCVGCGSCERHCPMGLTIAAHRQDGTLPHRDCLK
EEEEEECCCHHHHCCCCCCEEEEHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH
CSSCVDACPKDALGWPS
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MILTIAVGWRYPLVGFVVPAAMAASIAGSFFRGRYVCGNFCPRGSFFDTLFRLVGGPRDV
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
PAFLRGSAFRWTFLALLMGFLGWQISRDPADPAHWGFVFWMACALTTGIGIVLGLAFRAR
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TWCLVCPVGTMSNAIGGGNWQMTIAESCVGCGSCERHCPMGLTIAAHRQDGTLPHRDCLK
EEEEEECCCHHHHCCCCCCEEEEHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH
CSSCVDACPKDALGWPS
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA