| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995833
Identifier: 39995833
GI number: 39995833
Start: 774959
End: 775390
Strand: Reverse
Name: 39995833
Synonym: GSU0727
Alternate gene names: NA
Gene position: 775390-774959 (Counterclockwise)
Preceding gene: 39995835
Following gene: 39995830
Centisome position: 20.33
GC content: 62.96
Gene sequence:
>432_bases ATGAAACGGATGAAACGGACGGCGGGAGCGCTGCTTCTCGGTCTGGCACTGCTGCTCGGGGGATGTGGCGGGGGAGAGGT CCGCATCTCGGCGGAAATCCCCGTGGTGTACCCGGTCGACTACGCCCCTGCCATCACCTGGCTCAGCTTCTGGAAGGATG CGGACCGGTACTTCGTGCCGGGGTCCATCGACTTCACCGACCCGGACGCGGACACAGATATCATGACCATCGTTGTGAGC GACAGCCTCGGCCGGGTCATGGCGCGGACGGTTGCCGACCTGGATGACTATGTGGGCTATACCGGCGGCACGGTCTCGTT CTCGATCGACTACCTTACCTATCCGCCGGGAACCTATACCTTCACCATCTACCTCACCGACCGCGGCGGCAACCTGTCGA ACCCGGTCTACGGCACGTTCCAGGTCTGGTGA
Upstream 100 bases:
>100_bases GACATCGGGTCGCATGCCCTGCGATGTCGATGGTTTCGCGGCCGGATTCCCCCTAGAGTGGAGTCATGCGGAACATTTCG GGATGCAACGGGAGGGAACC
Downstream 100 bases:
>100_bases GATCTCGGCCTACCCCGGCAGCCAGAGGTCGACCGAGTCCGGTTCCACATCATGGGCCTGGACCCCGTGTTCCCACACGT TCCGGTCGCGCTTGGCCACC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKRMKRTAGALLLGLALLLGGCGGGEVRISAEIPVVYPVDYAPAITWLSFWKDADRYFVPGSIDFTDPDADTDIMTIVVS DSLGRVMARTVADLDDYVGYTGGTVSFSIDYLTYPPGTYTFTIYLTDRGGNLSNPVYGTFQVW
Sequences:
>Translated_143_residues MKRMKRTAGALLLGLALLLGGCGGGEVRISAEIPVVYPVDYAPAITWLSFWKDADRYFVPGSIDFTDPDADTDIMTIVVS DSLGRVMARTVADLDDYVGYTGGTVSFSIDYLTYPPGTYTFTIYLTDRGGNLSNPVYGTFQVW >Mature_143_residues MKRMKRTAGALLLGLALLLGGCGGGEVRISAEIPVVYPVDYAPAITWLSFWKDADRYFVPGSIDFTDPDADTDIMTIVVS DSLGRVMARTVADLDDYVGYTGGTVSFSIDYLTYPPGTYTFTIYLTDRGGNLSNPVYGTFQVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15601; Mature: 15601
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00144 ASN_GLN_ASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMKRTAGALLLGLALLLGGCGGGEVRISAEIPVVYPVDYAPAITWLSFWKDADRYFVP CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCCCCEECC GSIDFTDPDADTDIMTIVVSDSLGRVMARTVADLDDYVGYTGGTVSFSIDYLTYPPGTYT CCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCEE FTIYLTDRGGNLSNPVYGTFQVW EEEEEEECCCCCCCCCEEEEEEC >Mature Secondary Structure MKRMKRTAGALLLGLALLLGGCGGGEVRISAEIPVVYPVDYAPAITWLSFWKDADRYFVP CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCCCCEECC GSIDFTDPDADTDIMTIVVSDSLGRVMARTVADLDDYVGYTGGTVSFSIDYLTYPPGTYT CCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCEE FTIYLTDRGGNLSNPVYGTFQVW EEEEEEECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA