| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995826
Identifier: 39995826
GI number: 39995826
Start: 770620
End: 771102
Strand: Reverse
Name: 39995826
Synonym: GSU0720
Alternate gene names: NA
Gene position: 771102-770620 (Counterclockwise)
Preceding gene: 39995830
Following gene: 39995825
Centisome position: 20.22
GC content: 62.73
Gene sequence:
>483_bases ATGGATCGAAGAACCTTTCTGAAGACTGCCGCACTTGGCGCCATGGCGGCCGGCATCGCCCGCGAGGCGGCCGCGGCCGG CAGATACTACCCGGTCAAGGCGGACCAATCTCTTTTCGAAACCATCAACCGAGCCAAAGATCCGGCCAAGAAGAGTCCCC TGGAGCAGAAGCACGTTCCGGTCATCACCGCGCCCAAGGCGGTCAAGGCAGGGGAACCGTTCACTGTGGAGGTGGCAGTG GGCGAGGTGGTCCACCCCATGGGGCCGACCCACTGGATTCAGTTCATCGAGCTCAACGTGGGCAACGAGCCGGCAGGCAG GGTGGATATGCAGCCGCGCGGGTTCCTGTCGCCCAAGGCGACCTTCACCGTGACCATTCCCAAGGAGGCGGCGCCGGAGG GGAAAATCACCCTGGTGGTCAATGAACGGTGCAATCTTCATGGTTACTGGGAGGGAAGCATCGACATCGCCGTGACCGGG TGA
Upstream 100 bases:
>100_bases GCGTTGACATTCACGGCACCGGTTTTACACTTGAGAACACGCATTTCTCTCACCCGCTTCCGTTCCCCAGGAACAGAGCT ATGGTACCACAGGAGGAGCC
Downstream 100 bases:
>100_bases GGTGCGGCCCCATGGCGCGGATGGCGGTGCTGTCGGCCCTCATCCTCTGCCTCTGGGGATGCTCGATGCCGCGCGGCTGG GAAGCGATTCTGGTCCTGAC
Product: desulfoferrodoxin ferrous iron-binding domain-containing protein
Products: NA
Alternate protein names: Neelarodoxin; Twin-Arginine Translocation Pathway Signal; Rubredoxin Superoxide Reductase; Superoxide Reductase
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MDRRTFLKTAALGAMAAGIAREAAAAGRYYPVKADQSLFETINRAKDPAKKSPLEQKHVPVITAPKAVKAGEPFTVEVAV GEVVHPMGPTHWIQFIELNVGNEPAGRVDMQPRGFLSPKATFTVTIPKEAAPEGKITLVVNERCNLHGYWEGSIDIAVTG
Sequences:
>Translated_160_residues MDRRTFLKTAALGAMAAGIAREAAAAGRYYPVKADQSLFETINRAKDPAKKSPLEQKHVPVITAPKAVKAGEPFTVEVAV GEVVHPMGPTHWIQFIELNVGNEPAGRVDMQPRGFLSPKATFTVTIPKEAAPEGKITLVVNERCNLHGYWEGSIDIAVTG >Mature_160_residues MDRRTFLKTAALGAMAAGIAREAAAAGRYYPVKADQSLFETINRAKDPAKKSPLEQKHVPVITAPKAVKAGEPFTVEVAV GEVVHPMGPTHWIQFIELNVGNEPAGRVDMQPRGFLSPKATFTVTIPKEAAPEGKITLVVNERCNLHGYWEGSIDIAVTG
Specific function: Unknown
COG id: COG2033
COG function: function code C; Desulfoferrodoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17246; Mature: 17246
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRRTFLKTAALGAMAAGIAREAAAAGRYYPVKADQSLFETINRAKDPAKKSPLEQKHVP CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCCHHCCC VITAPKAVKAGEPFTVEVAVGEVVHPMGPTHWIQFIELNVGNEPAGRVDMQPRGFLSPKA EEECCCCCCCCCCEEEEEEECCEECCCCCCCEEEEEEEECCCCCCCEECCCCCCCCCCCC TFTVTIPKEAAPEGKITLVVNERCNLHGYWEGSIDIAVTG EEEEEECCCCCCCCCEEEEECCCCCEEEEECCEEEEEEEC >Mature Secondary Structure MDRRTFLKTAALGAMAAGIAREAAAAGRYYPVKADQSLFETINRAKDPAKKSPLEQKHVP CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCCHHCCC VITAPKAVKAGEPFTVEVAVGEVVHPMGPTHWIQFIELNVGNEPAGRVDMQPRGFLSPKA EEECCCCCCCCCCEEEEEEECCEECCCCCCCEEEEEEEECCCCCCCEECCCCCCCCCCCC TFTVTIPKEAAPEGKITLVVNERCNLHGYWEGSIDIAVTG EEEEEECCCCCCCCCEEEEECCCCCEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA