| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995825
Identifier: 39995825
GI number: 39995825
Start: 769496
End: 770608
Strand: Reverse
Name: 39995825
Synonym: GSU0719
Alternate gene names: NA
Gene position: 770608-769496 (Counterclockwise)
Preceding gene: 39995826
Following gene: 39995822
Centisome position: 20.2
GC content: 68.73
Gene sequence:
>1113_bases ATGGCGCGGATGGCGGTGCTGTCGGCCCTCATCCTCTGCCTCTGGGGATGCTCGATGCCGCGCGGCTGGGAAGCGATTCT GGTCCTGACCGACCTGTCCGCGGGCCGTGGCCCATCCGGCCTCAAGGAACGCACCCCGCCCCCCCGACGGCTGACGGTTC CCTACGCGGTGGAGGGGCGGAACTACCAGGGCGATCTCTATTTACCCTGCGAACGGATCAGGGCGGGGCTTGTCCTCCTG CCGGGAGCAGCCGAGGAGGGTAAGGACGATCCGCGGCTGCAGGCCTTCGCCGAAACCCTGGCCCGGGCACGCTTCGCCGT TCTCGTCCCCGATCTGGGGGGCTTCCGGAGCCTGCGGGCGGGAAGTCGCGACATCGGAGAAACCGCCGATGCCATCCTCT GGCTTTCTTCGCGCCCCGGACTTTCGCCCGGCGGGAAATGCGGGGTGGCGGCCCTGAGCTATGCCGGCGGCCCGGCACTG TTGGCGGCGCTGGAGCCGAGGGCCGGGCAGCGGGTCCGGTTCCTGGTTACGGTGGGGGGATACTATGATCTGCGGAACGT CCTGACCTTCTTCACCACCGGCTGGTACCGGGACGGAGACCGGTGGCGGCGGGGCACGCCAAACAACTACGGCAAATGGG TGTTCGTCCTGGCCAACACGGACCGGATCAAAAACGTCCGGGATCGGACGGCCCTCGAAAAACTGGCGCGGCGCAAAATG GATAACCCCGCCGCCCGGACCGACGATCTGGTCCGGGGGCTCGGCCCTGAAGGGAAAAGCCTTTACGATTTCTTCGCCAA CACCGATCCGCGGCAGGTCCCGGCGCTCGTGGAGAGGCTGCCGACACCGATCCGCCGGGACCTGGCGGCCCTCGACCCCT CACGGCGCGACCTGCGCGGACTCACAGCCCGGCTGATCATCATCCACGGCCGGGATGACGACATCATTCCCGCCGCCGAG AGCGAGGCCCTGGCCCGGGCAGTGCCCCGCGACCGGCGGGGGCTTTTTGTTCTGGACGGGCTCATGCACGTGGAGCTGAA GCCGAAGTTGACGGACGCCTTCCGGCTCTGGCGGGCGGTGTCGGCCATCCTGAGGGAACGCGACCGGGCCTGA
Upstream 100 bases:
>100_bases CGGAGGGGAAAATCACCCTGGTGGTCAATGAACGGTGCAATCTTCATGGTTACTGGGAGGGAAGCATCGACATCGCCGTG ACCGGGTGAGGTGCGGCCCC
Downstream 100 bases:
>100_bases GGGACGGTGTTACCCCCGTCCCCGCCGGGCCAGGATTTCGCCGATGCACTCCATGAGCTTCGTGAAATCGATGGGCTTTG AGAGATAGCCGTCCATGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MARMAVLSALILCLWGCSMPRGWEAILVLTDLSAGRGPSGLKERTPPPRRLTVPYAVEGRNYQGDLYLPCERIRAGLVLL PGAAEEGKDDPRLQAFAETLARARFAVLVPDLGGFRSLRAGSRDIGETADAILWLSSRPGLSPGGKCGVAALSYAGGPAL LAALEPRAGQRVRFLVTVGGYYDLRNVLTFFTTGWYRDGDRWRRGTPNNYGKWVFVLANTDRIKNVRDRTALEKLARRKM DNPAARTDDLVRGLGPEGKSLYDFFANTDPRQVPALVERLPTPIRRDLAALDPSRRDLRGLTARLIIIHGRDDDIIPAAE SEALARAVPRDRRGLFVLDGLMHVELKPKLTDAFRLWRAVSAILRERDRA
Sequences:
>Translated_370_residues MARMAVLSALILCLWGCSMPRGWEAILVLTDLSAGRGPSGLKERTPPPRRLTVPYAVEGRNYQGDLYLPCERIRAGLVLL PGAAEEGKDDPRLQAFAETLARARFAVLVPDLGGFRSLRAGSRDIGETADAILWLSSRPGLSPGGKCGVAALSYAGGPAL LAALEPRAGQRVRFLVTVGGYYDLRNVLTFFTTGWYRDGDRWRRGTPNNYGKWVFVLANTDRIKNVRDRTALEKLARRKM DNPAARTDDLVRGLGPEGKSLYDFFANTDPRQVPALVERLPTPIRRDLAALDPSRRDLRGLTARLIIIHGRDDDIIPAAE SEALARAVPRDRRGLFVLDGLMHVELKPKLTDAFRLWRAVSAILRERDRA >Mature_369_residues ARMAVLSALILCLWGCSMPRGWEAILVLTDLSAGRGPSGLKERTPPPRRLTVPYAVEGRNYQGDLYLPCERIRAGLVLLP GAAEEGKDDPRLQAFAETLARARFAVLVPDLGGFRSLRAGSRDIGETADAILWLSSRPGLSPGGKCGVAALSYAGGPALL AALEPRAGQRVRFLVTVGGYYDLRNVLTFFTTGWYRDGDRWRRGTPNNYGKWVFVLANTDRIKNVRDRTALEKLARRKMD NPAARTDDLVRGLGPEGKSLYDFFANTDPRQVPALVERLPTPIRRDLAALDPSRRDLRGLTARLIIIHGRDDDIIPAAES EALARAVPRDRRGLFVLDGLMHVELKPKLTDAFRLWRAVSAILRERDRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40958; Mature: 40827
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMAVLSALILCLWGCSMPRGWEAILVLTDLSAGRGPSGLKERTPPPRRLTVPYAVEGR CHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCC NYQGDLYLPCERIRAGLVLLPGAAEEGKDDPRLQAFAETLARARFAVLVPDLGGFRSLRA CCCCCEECCHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCHHHHCC GSRDIGETADAILWLSSRPGLSPGGKCGVAALSYAGGPALLAALEPRAGQRVRFLVTVGG CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHEECCCCCEEEEEECCCCCCEEEEEEEECC YYDLRNVLTFFTTGWYRDGDRWRRGTPNNYGKWVFVLANTDRIKNVRDRTALEKLARRKM HHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC DNPAARTDDLVRGLGPEGKSLYDFFANTDPRQVPALVERLPTPIRRDLAALDPSRRDLRG CCCCHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHC LTARLIIIHGRDDDIIPAAESEALARAVPRDRRGLFVLDGLMHVELKPKLTDAFRLWRAV CEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECEEEEEECCCHHHHHHHHHHH SAILRERDRA HHHHHHHCCC >Mature Secondary Structure ARMAVLSALILCLWGCSMPRGWEAILVLTDLSAGRGPSGLKERTPPPRRLTVPYAVEGR HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCC NYQGDLYLPCERIRAGLVLLPGAAEEGKDDPRLQAFAETLARARFAVLVPDLGGFRSLRA CCCCCEECCHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCHHHHCC GSRDIGETADAILWLSSRPGLSPGGKCGVAALSYAGGPALLAALEPRAGQRVRFLVTVGG CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHEECCCCCEEEEEECCCCCCEEEEEEEECC YYDLRNVLTFFTTGWYRDGDRWRRGTPNNYGKWVFVLANTDRIKNVRDRTALEKLARRKM HHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC DNPAARTDDLVRGLGPEGKSLYDFFANTDPRQVPALVERLPTPIRRDLAALDPSRRDLRG CCCCHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHC LTARLIIIHGRDDDIIPAAESEALARAVPRDRRGLFVLDGLMHVELKPKLTDAFRLWRAV CEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECEEEEEECCCHHHHHHHHHHH SAILRERDRA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA