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The map label for this gene is rpfG [H]

Identifier: 39995805

GI number: 39995805

Start: 740218

End: 741333

Strand: Direct

Name: rpfG [H]

Synonym: GSU0699

Alternate gene names: 39995805

Gene position: 740218-741333 (Clockwise)

Preceding gene: 39995804

Following gene: 39995807

Centisome position: 19.41

GC content: 66.04

Gene sequence:

>1116_bases
ATGAACGAAGCGACGCGTCAACGGCTTCTCGGGGCACTCAGGTCGCTGGTCACGGCCATTTCCGGCGCCGCCCTCTACGC
GGCCCGGCATCCCCGCGTCATCCTGCTGCGTTCCGAGGCGTTCACAGAGCTGTCGGCCGCCCTTGAGGCGGACGAGGCCC
TGTCGCTGGTGGTCATCGATGGCGAGATACTGGTGGAGGGCACGCCGCTTGACGGAGGGCTGTTTCTGCAACGCCTCGCG
GGAATGCTCACGTCCCGGGGGATCGGGCACCTCAAGTTCCTGCGCGGCGTGACGGAAGAGGAGCTGGCGGCCCTGGCATC
GATTCTCGCTGGGTCGGGAACGGCGGGTGGCGAGTTCCATTCGTCACCCCACGTGCGGTTCGGCCGGGTGGAGGTCCGCT
ATTCCGGGGGCACGGACGGCACCGGACACGCCTCGGGCCTGCCCGCCATGGAGATCGGCCGTTTTATGGAGCTGTACCAA
GGGGTCGCCCGCCACCGGCGCAGCCATGTGACCGGCCTGGCCGATCTGGTGGCGGGCTTCATCACCGCCCTGCGCGAGCA
GGCCAGTCCGCTGGCGGCCCTGGCCCCTTTGCGGGACGTTGACGAATATACATTCACCCACTCGGTGAACGTCTGTGTCC
TCAATCTGGCCCAGGCCATGGCCCTGGGCATCGACGGGCCTCTCCTGCAGGAAATAGGCATTGCCGGCATGCTTCACGAC
ATCGGCAAGATGTTCGTTCCCCCCGAGATACTCACCAAGCCGGGCCAGCTGGATGATGACGAATGGGCCGTCATGCGCCG
CCATCCCCTCATGGGAGCCCGCTGTCTGGCTGAAACCCCCGGCGTGCCGCGGCTCGCAGTGGTTGCCACCTTCGAGCACC
ATCTAAAGCACGATCTCTCCGGCTATCCGTCCGTTGCCGCCGGCTGGCGCCAGAGTCTCTGCAGCGAGATGACGACCCTT
TCGGACTTTTTCGATGCCCTGCGCACCCGGCGCGCCTACCGCGACTCCATGGAACTCCGTCAGATAGCCGGCATCCTGCT
GGAGAAGCGGGGCCGGGATTTCCATCCCCTCCTCACCCGCAATTTTCTGCTGGTCTTGAGCCGGCTTGCCGCCTAA

Upstream 100 bases:

>100_bases
GGCAGGAGCCCCTGCGCCTGCTGCGCGATGCCGCCGCTACTGGTGGCGAAATCGCCGGTGCCGCGCGGGTCGCGCTCAGG
CTCGCCGAAGCGAGGGACCG

Downstream 100 bases:

>100_bases
TCCCCCACCTTCAGCAGCGCCATACAGATGTCGTCGCCGGACGGCACTCCCCCCGTGAACATCCGCAGTCGTGTCAGAAT
GGCGTCGAGGAGTTCTTCCG

Product: HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MNEATRQRLLGALRSLVTAISGAALYAARHPRVILLRSEAFTELSAALEADEALSLVVIDGEILVEGTPLDGGLFLQRLA
GMLTSRGIGHLKFLRGVTEEELAALASILAGSGTAGGEFHSSPHVRFGRVEVRYSGGTDGTGHASGLPAMEIGRFMELYQ
GVARHRRSHVTGLADLVAGFITALREQASPLAALAPLRDVDEYTFTHSVNVCVLNLAQAMALGIDGPLLQEIGIAGMLHD
IGKMFVPPEILTKPGQLDDDEWAVMRRHPLMGARCLAETPGVPRLAVVATFEHHLKHDLSGYPSVAAGWRQSLCSEMTTL
SDFFDALRTRRAYRDSMELRQIAGILLEKRGRDFHPLLTRNFLLVLSRLAA

Sequences:

>Translated_371_residues
MNEATRQRLLGALRSLVTAISGAALYAARHPRVILLRSEAFTELSAALEADEALSLVVIDGEILVEGTPLDGGLFLQRLA
GMLTSRGIGHLKFLRGVTEEELAALASILAGSGTAGGEFHSSPHVRFGRVEVRYSGGTDGTGHASGLPAMEIGRFMELYQ
GVARHRRSHVTGLADLVAGFITALREQASPLAALAPLRDVDEYTFTHSVNVCVLNLAQAMALGIDGPLLQEIGIAGMLHD
IGKMFVPPEILTKPGQLDDDEWAVMRRHPLMGARCLAETPGVPRLAVVATFEHHLKHDLSGYPSVAAGWRQSLCSEMTTL
SDFFDALRTRRAYRDSMELRQIAGILLEKRGRDFHPLLTRNFLLVLSRLAA
>Mature_371_residues
MNEATRQRLLGALRSLVTAISGAALYAARHPRVILLRSEAFTELSAALEADEALSLVVIDGEILVEGTPLDGGLFLQRLA
GMLTSRGIGHLKFLRGVTEEELAALASILAGSGTAGGEFHSSPHVRFGRVEVRYSGGTDGTGHASGLPAMEIGRFMELYQ
GVARHRRSHVTGLADLVAGFITALREQASPLAALAPLRDVDEYTFTHSVNVCVLNLAQAMALGIDGPLLQEIGIAGMLHD
IGKMFVPPEILTKPGQLDDDEWAVMRRHPLMGARCLAETPGVPRLAVVATFEHHLKHDLSGYPSVAAGWRQSLCSEMTTL
SDFFDALRTRRAYRDSMELRQIAGILLEKRGRDFHPLLTRNFLLVLSRLAA

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 40184; Mature: 40184

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEATRQRLLGALRSLVTAISGAALYAARHPRVILLRSEAFTELSAALEADEALSLVVID
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEC
GEILVEGTPLDGGLFLQRLAGMLTSRGIGHLKFLRGVTEEELAALASILAGSGTAGGEFH
CEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
SSPHVRFGRVEVRYSGGTDGTGHASGLPAMEIGRFMELYQGVARHRRSHVTGLADLVAGF
CCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITALREQASPLAALAPLRDVDEYTFTHSVNVCVLNLAQAMALGIDGPLLQEIGIAGMLHD
HHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IGKMFVPPEILTKPGQLDDDEWAVMRRHPLMGARCLAETPGVPRLAVVATFEHHLKHDLS
HHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCC
GYPSVAAGWRQSLCSEMTTLSDFFDALRTRRAYRDSMELRQIAGILLEKRGRDFHPLLTR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
NFLLVLSRLAA
HHHHHHHHHCC
>Mature Secondary Structure
MNEATRQRLLGALRSLVTAISGAALYAARHPRVILLRSEAFTELSAALEADEALSLVVID
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEC
GEILVEGTPLDGGLFLQRLAGMLTSRGIGHLKFLRGVTEEELAALASILAGSGTAGGEFH
CEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
SSPHVRFGRVEVRYSGGTDGTGHASGLPAMEIGRFMELYQGVARHRRSHVTGLADLVAGF
CCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITALREQASPLAALAPLRDVDEYTFTHSVNVCVLNLAQAMALGIDGPLLQEIGIAGMLHD
HHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IGKMFVPPEILTKPGQLDDDEWAVMRRHPLMGARCLAETPGVPRLAVVATFEHHLKHDLS
HHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCC
GYPSVAAGWRQSLCSEMTTLSDFFDALRTRRAYRDSMELRQIAGILLEKRGRDFHPLLTR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
NFLLVLSRLAA
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]