| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995804
Identifier: 39995804
GI number: 39995804
Start: 737960
End: 740221
Strand: Direct
Name: 39995804
Synonym: GSU0698
Alternate gene names: NA
Gene position: 737960-740221 (Clockwise)
Preceding gene: 39995802
Following gene: 39995805
Centisome position: 19.35
GC content: 67.11
Gene sequence:
>2262_bases ATGCGTTGCACGGTATGCCGTTTTCGTTTACGATGCACCGGCAATGAGCCGGGCTCAGCAGTTACGGTGCCGGTGCCACG GGAGCGGTCACGTTTGACTGATACGAACTCAGACATACGCATTGCCGGCATCGAGCCGGGTATTCTCTCCTCGTTCATCA TCGAGCTGAATATCCTGAGGCGGGCGGTCTCGGCCTACCCGGAGGGGCATCCGGCCATCCGCTCCGCGGCGGAGAAGGTC GCCGGCCAGACGGACCTGCTCCTCGCCGGCGAGGGAAGCGCCACCATGGGCATCGCGCGCGACACCATCCTCTTCGGCGG CCACCCCCTGGACCGTCGGAACCTCGTGTTCCGTGACCTGGCACGGTTTCTCTCCGAGCGGGGGCTCACCCTGCTTACGG TGAAACGGGGCGTCTCCCCGGACGAACTGGTCCGGTTCTGCTCACTGCTGGGTCTCCGGCGCGAGGAGATTCGCCAGCGG GGTGGCCTGGGGCGGATGATGACCGAAGCGGCTATCCTGGGGCTTGAGGTGACGGGGCTCGATTACGGCCTGTTCCACGT AACCGAGGACGAGCGTGTTACGGCCCCATCGGCCGATCAGGACGATCTTTCACTCTGGGAGCGGTACGTGCGGGGGATGC TCGATGGTACCCTGGACCCCTTCGGCACGGTGACCGAGCATCACGGCACTCTGGCGCCGGAGGAGCTGGCCCGGCTCATG AACGGCTGCCTCGCCGGCTCATCGGAAAACCGGCAGAAAAGTTACGACGCGGTCATCACCGCGTTTCTCCGCACCGTACG GGAGGCCGAGCAACATCCGGTGGGAGACGATAGTCAGACGGCCCGCCTGGCCGAGCTGGCCGAACTGCTCACCCCCGAGT TACGCCGCCAGTTTCTGGGCAGTACCTTTGCGTCCCTGGCGCGCCATCCTGCCATGGCGGAGCGGGTTGCCGCAGCCCTG TCCGACGGAGCGGTCATGGAGGCCTTTACGGGGCTGACCGAACGCGGCTCCTCCATCCCTGCCGTTCTGCTCGATCTCTT TCAGCGTTTCGGTTTGGCCGCCCCCTCCACTGCTGTCGGCCGGGCCCCATCGTCCCATCCCGCCGGGGCGGCGGAGATGG CGCGCCGGTTGGAAACCGTTCTGCGAGAAGGGGACAGCCGGGCCTTCGTTCCCCTGCCCTATGAGGAAGACCTCTCCCGT TTGACGCGAGCCGGGGTTCAACGGGCGGTGGCTCCCGAACTGGAGTCCCTGCGGCTGGAACTTGAATCGGAAAATGCTGC AGTCAAGGCGGGAGAGGTCATCATGGAAATCATCCGCCTGGAGCCTGACGGAGCCGACCCGTTTGCGTCGAACCTGGCAG AGCTTGCCGAGTACTACCTCGCCACCGGAGACTTCGGTTCACTGGGGGGACTGTTCCTGCGCATCCACGCCCTGGAAAAG GCCGGTGCCGGCGCTGCCCTGCGAGAGGCACTCGGCGCTCCGTCTTTCGCGGCTGCATTGATCGACGCGCCCGCCATCTG GGGAAAAGTGCGTTACGACGAGATCCGGCAGATTATTTCGCAGCTCGGCTCCCCCTGTGTGACTCCCCTGCTTGACCGGC TGGCGGTGGAGGAGTCCATGACCCTCCGACGCTGGTACATGGAATGCCTGATGGGGCTCGGCGACGCCGCCGGCGCTGCC GCCGTCGCCCTCCTGGAGGACGGCCGGTGGTACTTCGTGCGAAACCTCCTGATCCTTCTCCGGCAACTCGACTACTCGGC CGGCGCGGCACCCGCCAGAAAGCTGCTTGCGCATCCCCACCCCAAGGTACGTCAGGAGGCGGCCCGCACCCTGCTCAGGT TCCGCGACTCCCAGGCGGAGCAGTGGCTGCTCCGCGGGCTGGACAGCTCTGACCGCGAGACCCTGCTCATGGCGGTGCCG TTGGTGGACGGCAATGCGAGCCGGCGGGTCCGGGCTCAGTTGATCGAGCTTCTGCGGCGCGGCGGCGCTGCCGCCGATCC AGAGGTCCGCTGCGCCACGGTCCGGGCGCTGGCCGAGACGGGGGATCCCGCAGCCCTGCCGGAGCTGACGCGCATTCTGG GCAGCAGGAGCCTGCTGCGCTCCGCGGCCCTCAATCAGGTGAAGCTGGAGGTGATCCGCTCGCTTCCCCGTTTCCCGGGG CAGGAGCCCCTGCGCCTGCTGCGCGATGCCGCCGCTACTGGTGGCGAAATCGCCGGTGCCGCGCGGGTCGCGCTCAGGCT CGCCGAAGCGAGGGACCGATGA
Upstream 100 bases:
>100_bases CTCTGCGGCGCGCCCCTAGTGTCCGGCGCGGCAGGGCTATTCTCTCCATTTGGGCTGATTATGCAACCCCTTTTTCCCCC AGGGAAGCGGTTCCGACGGC
Downstream 100 bases:
>100_bases ACGAAGCGACGCGTCAACGGCTTCTCGGGGCACTCAGGTCGCTGGTCACGGCCATTTCCGGCGCCGCCCTCTACGCGGCC CGGCATCCCCGCGTCATCCT
Product: PBS lyase
Products: NA
Alternate protein names: PBS Lyase HEAT Domain Protein Repeat-Containing Protein; PBS Lyase Heat-Like Repeat Protein; PBS HEAT-Like Repeat-Containing Protein
Number of amino acids: Translated: 753; Mature: 753
Protein sequence:
>753_residues MRCTVCRFRLRCTGNEPGSAVTVPVPRERSRLTDTNSDIRIAGIEPGILSSFIIELNILRRAVSAYPEGHPAIRSAAEKV AGQTDLLLAGEGSATMGIARDTILFGGHPLDRRNLVFRDLARFLSERGLTLLTVKRGVSPDELVRFCSLLGLRREEIRQR GGLGRMMTEAAILGLEVTGLDYGLFHVTEDERVTAPSADQDDLSLWERYVRGMLDGTLDPFGTVTEHHGTLAPEELARLM NGCLAGSSENRQKSYDAVITAFLRTVREAEQHPVGDDSQTARLAELAELLTPELRRQFLGSTFASLARHPAMAERVAAAL SDGAVMEAFTGLTERGSSIPAVLLDLFQRFGLAAPSTAVGRAPSSHPAGAAEMARRLETVLREGDSRAFVPLPYEEDLSR LTRAGVQRAVAPELESLRLELESENAAVKAGEVIMEIIRLEPDGADPFASNLAELAEYYLATGDFGSLGGLFLRIHALEK AGAGAALREALGAPSFAAALIDAPAIWGKVRYDEIRQIISQLGSPCVTPLLDRLAVEESMTLRRWYMECLMGLGDAAGAA AVALLEDGRWYFVRNLLILLRQLDYSAGAAPARKLLAHPHPKVRQEAARTLLRFRDSQAEQWLLRGLDSSDRETLLMAVP LVDGNASRRVRAQLIELLRRGGAAADPEVRCATVRALAETGDPAALPELTRILGSRSLLRSAALNQVKLEVIRSLPRFPG QEPLRLLRDAAATGGEIAGAARVALRLAEARDR
Sequences:
>Translated_753_residues MRCTVCRFRLRCTGNEPGSAVTVPVPRERSRLTDTNSDIRIAGIEPGILSSFIIELNILRRAVSAYPEGHPAIRSAAEKV AGQTDLLLAGEGSATMGIARDTILFGGHPLDRRNLVFRDLARFLSERGLTLLTVKRGVSPDELVRFCSLLGLRREEIRQR GGLGRMMTEAAILGLEVTGLDYGLFHVTEDERVTAPSADQDDLSLWERYVRGMLDGTLDPFGTVTEHHGTLAPEELARLM NGCLAGSSENRQKSYDAVITAFLRTVREAEQHPVGDDSQTARLAELAELLTPELRRQFLGSTFASLARHPAMAERVAAAL SDGAVMEAFTGLTERGSSIPAVLLDLFQRFGLAAPSTAVGRAPSSHPAGAAEMARRLETVLREGDSRAFVPLPYEEDLSR LTRAGVQRAVAPELESLRLELESENAAVKAGEVIMEIIRLEPDGADPFASNLAELAEYYLATGDFGSLGGLFLRIHALEK AGAGAALREALGAPSFAAALIDAPAIWGKVRYDEIRQIISQLGSPCVTPLLDRLAVEESMTLRRWYMECLMGLGDAAGAA AVALLEDGRWYFVRNLLILLRQLDYSAGAAPARKLLAHPHPKVRQEAARTLLRFRDSQAEQWLLRGLDSSDRETLLMAVP LVDGNASRRVRAQLIELLRRGGAAADPEVRCATVRALAETGDPAALPELTRILGSRSLLRSAALNQVKLEVIRSLPRFPG QEPLRLLRDAAATGGEIAGAARVALRLAEARDR >Mature_753_residues MRCTVCRFRLRCTGNEPGSAVTVPVPRERSRLTDTNSDIRIAGIEPGILSSFIIELNILRRAVSAYPEGHPAIRSAAEKV AGQTDLLLAGEGSATMGIARDTILFGGHPLDRRNLVFRDLARFLSERGLTLLTVKRGVSPDELVRFCSLLGLRREEIRQR GGLGRMMTEAAILGLEVTGLDYGLFHVTEDERVTAPSADQDDLSLWERYVRGMLDGTLDPFGTVTEHHGTLAPEELARLM NGCLAGSSENRQKSYDAVITAFLRTVREAEQHPVGDDSQTARLAELAELLTPELRRQFLGSTFASLARHPAMAERVAAAL SDGAVMEAFTGLTERGSSIPAVLLDLFQRFGLAAPSTAVGRAPSSHPAGAAEMARRLETVLREGDSRAFVPLPYEEDLSR LTRAGVQRAVAPELESLRLELESENAAVKAGEVIMEIIRLEPDGADPFASNLAELAEYYLATGDFGSLGGLFLRIHALEK AGAGAALREALGAPSFAAALIDAPAIWGKVRYDEIRQIISQLGSPCVTPLLDRLAVEESMTLRRWYMECLMGLGDAAGAA AVALLEDGRWYFVRNLLILLRQLDYSAGAAPARKLLAHPHPKVRQEAARTLLRFRDSQAEQWLLRGLDSSDRETLLMAVP LVDGNASRRVRAQLIELLRRGGAAADPEVRCATVRALAETGDPAALPELTRILGSRSLLRSAALNQVKLEVIRSLPRFPG QEPLRLLRDAAATGGEIAGAARVALRLAEARDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81730; Mature: 81730
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCTVCRFRLRCTGNEPGSAVTVPVPRERSRLTDTNSDIRIAGIEPGILSSFIIELNILR CCCCEEEEEEEECCCCCCCEEEECCCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH RAVSAYPEGHPAIRSAAEKVAGQTDLLLAGEGSATMGIARDTILFGGHPLDRRNLVFRDL HHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEECCCCCCHHHHHHHHH ARFLSERGLTLLTVKRGVSPDELVRFCSLLGLRREEIRQRGGLGRMMTEAAILGLEVTGL HHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCEEEECC DYGLFHVTEDERVTAPSADQDDLSLWERYVRGMLDGTLDPFGTVTEHHGTLAPEELARLM CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHH NGCLAGSSENRQKSYDAVITAFLRTVREAEQHPVGDDSQTARLAELAELLTPELRRQFLG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHH STFASLARHPAMAERVAAALSDGAVMEAFTGLTERGSSIPAVLLDLFQRFGLAAPSTAVG HHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHC RAPSSHPAGAAEMARRLETVLREGDSRAFVPLPYEEDLSRLTRAGVQRAVAPELESLRLE CCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LESENAAVKAGEVIMEIIRLEPDGADPFASNLAELAEYYLATGDFGSLGGLFLRIHALEK CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AGAGAALREALGAPSFAAALIDAPAIWGKVRYDEIRQIISQLGSPCVTPLLDRLAVEESM CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TLRRWYMECLMGLGDAAGAAAVALLEDGRWYFVRNLLILLRQLDYSAGAAPARKLLAHPH HHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC PKVRQEAARTLLRFRDSQAEQWLLRGLDSSDRETLLMAVPLVDGNASRRVRAQLIELLRR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHC GGAAADPEVRCATVRALAETGDPAALPELTRILGSRSLLRSAALNQVKLEVIRSLPRFPG CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QEPLRLLRDAAATGGEIAGAARVALRLAEARDR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRCTVCRFRLRCTGNEPGSAVTVPVPRERSRLTDTNSDIRIAGIEPGILSSFIIELNILR CCCCEEEEEEEECCCCCCCEEEECCCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH RAVSAYPEGHPAIRSAAEKVAGQTDLLLAGEGSATMGIARDTILFGGHPLDRRNLVFRDL HHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEECCCCCCHHHHHHHHH ARFLSERGLTLLTVKRGVSPDELVRFCSLLGLRREEIRQRGGLGRMMTEAAILGLEVTGL HHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCEEEECC DYGLFHVTEDERVTAPSADQDDLSLWERYVRGMLDGTLDPFGTVTEHHGTLAPEELARLM CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHH NGCLAGSSENRQKSYDAVITAFLRTVREAEQHPVGDDSQTARLAELAELLTPELRRQFLG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHH STFASLARHPAMAERVAAALSDGAVMEAFTGLTERGSSIPAVLLDLFQRFGLAAPSTAVG HHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHC RAPSSHPAGAAEMARRLETVLREGDSRAFVPLPYEEDLSRLTRAGVQRAVAPELESLRLE CCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LESENAAVKAGEVIMEIIRLEPDGADPFASNLAELAEYYLATGDFGSLGGLFLRIHALEK CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AGAGAALREALGAPSFAAALIDAPAIWGKVRYDEIRQIISQLGSPCVTPLLDRLAVEESM CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TLRRWYMECLMGLGDAAGAAAVALLEDGRWYFVRNLLILLRQLDYSAGAAPARKLLAHPH HHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC PKVRQEAARTLLRFRDSQAEQWLLRGLDSSDRETLLMAVPLVDGNASRRVRAQLIELLRR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHC GGAAADPEVRCATVRALAETGDPAALPELTRILGSRSLLRSAALNQVKLEVIRSLPRFPG CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QEPLRLLRDAAATGGEIAGAARVALRLAEARDR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA