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The map label for this gene is yraN [C]

Identifier: 39995756

GI number: 39995756

Start: 681407

End: 681793

Strand: Direct

Name: yraN [C]

Synonym: GSU0650

Alternate gene names: 39995756

Gene position: 681407-681793 (Clockwise)

Preceding gene: 39995755

Following gene: 39995757

Centisome position: 17.87

GC content: 59.17

Gene sequence:

>387_bases
GTGCCGGTAGGAGAAGGCAGCCATCATAACAAGATCCTCGGTGTTCGCGGCGAGGACCTGGCCGCAGCCTACCTTGAACG
GCTCCGTTACCGTATCATCGACCGGAACTTCCGCTGCAGGGGGGGGGAGGTCGACATCGTAGCCCGTGACGGAAAGACAC
TTGTGTTCGTCGAGGTCAAAACCAGGAGGACGGCCGGTTACGGCGTCCCCCAGTTGGCGGTCACTCCCTTCAAGCAGCGG
CAGATTTCCAAGGCGGCTCTTGCCTGGCTCACCCGCAAGGGCATGTTAGACGTAAACGCCAGGTTCGATGTTATCGCAAT
AACCATTCTTTCCCCCGACGCCCCCCGCATCGAACATATCACCAACGCTTTCGAGCTTGCCTACTGA

Upstream 100 bases:

>100_bases
ACGGGAGCGCCTCCCATATGGCAGCTATTGCCGCACTGGGGCCTTCGCCCATTCACCGCACAACCTTCCGCGGGGTCAGG
GAGCACCTGGGAGAAAGTCG

Downstream 100 bases:

>100_bases
CCCGGAATTACCGTTGAAACCTCCCCACCCCTGTGGTACCGTAGGCCGAAACTTACGGGGGAGATGTCGTGGATTTCACT
GTTGCACTGGCCCAGATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MPVGEGSHHNKILGVRGEDLAAAYLERLRYRIIDRNFRCRGGEVDIVARDGKTLVFVEVKTRRTAGYGVPQLAVTPFKQR
QISKAALAWLTRKGMLDVNARFDVIAITILSPDAPRIEHITNAFELAY

Sequences:

>Translated_128_residues
MPVGEGSHHNKILGVRGEDLAAAYLERLRYRIIDRNFRCRGGEVDIVARDGKTLVFVEVKTRRTAGYGVPQLAVTPFKQR
QISKAALAWLTRKGMLDVNARFDVIAITILSPDAPRIEHITNAFELAY
>Mature_127_residues
PVGEGSHHNKILGVRGEDLAAAYLERLRYRIIDRNFRCRGGEVDIVARDGKTLVFVEVKTRRTAGYGVPQLAVTPFKQRQ
ISKAALAWLTRKGMLDVNARFDVIAITILSPDAPRIEHITNAFELAY

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=116, Percent_Identity=40.5172413793103, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y650_GEOSL (Q74FF9)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_951707.1
- ProteinModelPortal:   Q74FF9
- GeneID:   2685509
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU0650
- NMPDR:   fig|243231.1.peg.645
- TIGR:   GSU0650
- HOGENOM:   HBG710155
- OMA:   KQRQISK
- ProtClustDB:   PRK14675
- BioCyc:   GSUL243231:GSU_0650-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14363; Mature: 14232

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS00850 GLY_RADICAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGEGSHHNKILGVRGEDLAAAYLERLRYRIIDRNFRCRGGEVDIVARDGKTLVFVEVK
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEEE
TRRTAGYGVPQLAVTPFKQRQISKAALAWLTRKGMLDVNARFDVIAITILSPDAPRIEHI
ECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEEEEECCCCCHHHHH
TNAFELAY
HHHHCCCC
>Mature Secondary Structure 
PVGEGSHHNKILGVRGEDLAAAYLERLRYRIIDRNFRCRGGEVDIVARDGKTLVFVEVK
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEEE
TRRTAGYGVPQLAVTPFKQRQISKAALAWLTRKGMLDVNARFDVIAITILSPDAPRIEHI
ECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEEEEECCCCCHHHHH
TNAFELAY
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA