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The map label for this gene is ccsA [H]

Identifier: 39995721

GI number: 39995721

Start: 649955

End: 650806

Strand: Direct

Name: ccsA [H]

Synonym: GSU0614

Alternate gene names: 39995721

Gene position: 649955-650806 (Clockwise)

Preceding gene: 39995720

Following gene: 39995722

Centisome position: 17.04

GC content: 58.1

Gene sequence:

>852_bases
ATGACCAGTTCCATGCTGTTCAACATCACGACGTTCACCTACCTGGTCTCCATGCTCGCTTTTTTTGCCTTCCTGGCGAG
CAGGAACCGTCACCTGGGGATGGCGGGGAGTCTCATTTCCTATTTTGGCTTCTTCGTCCACACGGCTGCCATTCTGCTCC
GCTGGAAGGAGTCCTATGACATCGGGCACGGCCACGCTCCCCTGTCGAATCTCTACGAGTCGGTGGTTTTCTTTGCCTGG
ACCATCGTTCTCATCTTCGGCATCATTGACCTGAAGTACAAGTACCGGGTCGTGGGCGCGTTCGTCATGCCCTTTGCGCT
CCTCGGCATGGCCTGGGCCCAGCTGACGCTCAACAGCGGCATCGAGCCTCTTGTCCCGGCGCTCCAGAGCAACTGGCTGC
TCTATCACGTCGTCACCTGCTTCCTGGGGTATGCCGCCTTTGCCGTTGCCTGCGGCATCTCCATCATGTATCTGATCAAG
GCGGGGAAAGAGGACTCATCCCAATCGGCACAGGCCGGCGGAATCATCTCGATGTTTCCCCCTACGAAGATCCTTGATGA
TCTCAACTACAAGGCGATCATGATCGGGTTCCCGCTGCTCACGCTCGGTATAATCACCGGCGCAGCATGGGCCAACTACG
CCTGGGGTACCTACTGGAGCTGGGACCCGAAAGAGACCTGGTCGCTGATCGTCTGGTTCGTTTATGCCGCATTCCTGCAT
GCCCGCTTTACCCGCGGGTGGGTCGGGAAGCGCGCCGCCATCCTTTCCATTGTCGGATTCGCGGCCACTATCTTCTGCTA
CCTCGGTGTGAACCTTCTTCTCTCCGGTCTCCACAGTTACGGAGGAGGGTAG

Upstream 100 bases:

>100_bases
CGGCGGCACCGCCAACAAGAACCAGCCGGGATTCCAACTCGCCTTCGACACCCTTGTCGATAAACTGAAAACTCTGTAAG
TACGGGCGGAGGATTGACTA

Downstream 100 bases:

>100_bases
GCCTTCTGTTGGCAATGCTCTTGCATCATGTGCAGGGCATGCCTGACAATTTCTCCCGACATCCCCTCATCGCTTCGGCG
CCCGCATGGGCGCCGAAGTT

Product: CcmF/CcyK/CcsA family cytochrome C biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTSSMLFNITTFTYLVSMLAFFAFLASRNRHLGMAGSLISYFGFFVHTAAILLRWKESYDIGHGHAPLSNLYESVVFFAW
TIVLIFGIIDLKYKYRVVGAFVMPFALLGMAWAQLTLNSGIEPLVPALQSNWLLYHVVTCFLGYAAFAVACGISIMYLIK
AGKEDSSQSAQAGGIISMFPPTKILDDLNYKAIMIGFPLLTLGIITGAAWANYAWGTYWSWDPKETWSLIVWFVYAAFLH
ARFTRGWVGKRAAILSIVGFAATIFCYLGVNLLLSGLHSYGGG

Sequences:

>Translated_283_residues
MTSSMLFNITTFTYLVSMLAFFAFLASRNRHLGMAGSLISYFGFFVHTAAILLRWKESYDIGHGHAPLSNLYESVVFFAW
TIVLIFGIIDLKYKYRVVGAFVMPFALLGMAWAQLTLNSGIEPLVPALQSNWLLYHVVTCFLGYAAFAVACGISIMYLIK
AGKEDSSQSAQAGGIISMFPPTKILDDLNYKAIMIGFPLLTLGIITGAAWANYAWGTYWSWDPKETWSLIVWFVYAAFLH
ARFTRGWVGKRAAILSIVGFAATIFCYLGVNLLLSGLHSYGGG
>Mature_282_residues
TSSMLFNITTFTYLVSMLAFFAFLASRNRHLGMAGSLISYFGFFVHTAAILLRWKESYDIGHGHAPLSNLYESVVFFAWT
IVLIFGIIDLKYKYRVVGAFVMPFALLGMAWAQLTLNSGIEPLVPALQSNWLLYHVVTCFLGYAAFAVACGISIMYLIKA
GKEDSSQSAQAGGIISMFPPTKILDDLNYKAIMIGFPLLTLGIITGAAWANYAWGTYWSWDPKETWSLIVWFVYAAFLHA
RFTRGWVGKRAAILSIVGFAATIFCYLGVNLLLSGLHSYGGG

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 31339; Mature: 31208

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSSMLFNITTFTYLVSMLAFFAFLASRNRHLGMAGSLISYFGFFVHTAAILLRWKESYD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGHGHAPLSNLYESVVFFAWTIVLIFGIIDLKYKYRVVGAFVMPFALLGMAWAQLTLNSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IEPLVPALQSNWLLYHVVTCFLGYAAFAVACGISIMYLIKAGKEDSSQSAQAGGIISMFP
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEECC
PTKILDDLNYKAIMIGFPLLTLGIITGAAWANYAWGTYWSWDPKETWSLIVWFVYAAFLH
CHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ARFTRGWVGKRAAILSIVGFAATIFCYLGVNLLLSGLHSYGGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]