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The map label for this gene is ccsB [H]

Identifier: 39995720

GI number: 39995720

Start: 648569

End: 649933

Strand: Direct

Name: ccsB [H]

Synonym: GSU0613

Alternate gene names: 39995720

Gene position: 648569-649933 (Clockwise)

Preceding gene: 39995719

Following gene: 39995721

Centisome position: 17.0

GC content: 57.44

Gene sequence:

>1365_bases
TTGACAACCAGCGATCGCGGCTTCTTGCAGGCACTGTGGGATTTCTTCTGTTCCCTCAAGTTGGCAATCTTCCTTCTCAT
TCTTCTAGCGGCAACGTCCATCATCGGTACGATCATTCCGCAGCAGAATCCGCTTCCCCCCGAGTACATCGCGGCCATAG
GCGGCACGGGAAGCATGAAGTTCAAGGTCTACTCGACCCTTGGCTTCTTTGATATGTACCACTCCTGGTGGTTCATTCTC
CTGCTCTATCTGTTCACGGTCAACATCGTAGCCTGTTCCATCAAGCGGCTGCCCCGGGTATGGAAAACCATTTCCGAGCC
GACGCTCGTCATGGACGAGGGCTTTGAGCGGACCCTGACGCTCACCCATGACTTCAAGAAAGAGGGTGATGCGGCTGACC
TGAACGAGAAGATGAAGGCTTTCCTCAAGAGCGAGTTCGCCGAGCCGGTGGTGACCGAGCGGGACGGAGAGTTCCACCTC
TTCGCCCAGAAGTCGCCGTACAGCAGGCTGGGTGTTTATGTCGTGCACCTGAGCATCGTCATCATATTCATCGGTGCCCT
GCTCGGATCGTTCTTCGGGTACAAGGCCTATGTGAATATCGTGGAAGGCTCGGGAGCCTCTACGGTCATGTCTCGCAAGG
GCGTGCCGATTGATCTCGGCTTTACGGTTAAGTGTGAGGATTTTTCGGTTTCGTTTTACGACACCGGGGCCCCAAAAGAA
TTCAAGAGTCTCCTCACCGTCATCGACGGCGGCAAGGTGGTCATCGACAAACGCCCTGTCATCGTGAACGAGCCGCTGAC
CTACAAGGGGATAACGTTTTACCAGTCGAGCTACGGCCCTGCGGATGAAGGCGGCCTCTATCACCTCACCGTGCGCGAGC
GCAAGGGAGGAGCTCCCGTACGGCTATCTCTGTCCATGGGAGAGCGGAAGGTCCTGCCCGACGGCTCCGCAGTCCAGCTC
CTGGAGGCTACTGACGAAATCGGGCGCTTCATTCCCCAGTTCCGGGGCCCGGCGGTGCGGGTCGCTGTGGAGCCCAAGAG
CGGCGAGCCCCAGGCGTTCATCGTGTTCCAGAACTATCCGGAATTCGACGTCCAGCGTGGAGCGGACCATATCTTCACGT
ATGAAGGGGCCGATCTCAAGATGTTCACCGGACTTCAGGTCGCCAAAGACCCGGGTGTCTGGGTAGTGTGGCTGGGATGC
ACCCTGATGGTGGTTGGCTGTTGCATGGCCTTCTTCATGTCCCACAAGCGGATCTGGATACGGGTTCGCAAGGGGCATGT
GACCCTCGGCGGCACCGCCAACAAGAACCAGCCGGGATTCCAACTCGCCTTCGACACCCTTGTCGATAAACTGAAAACTC
TGTAA

Upstream 100 bases:

>100_bases
CTGTTTGTTTTTTCCGGATATTTTTGTTTATAATCGTCTCTGCCCTGGTCGGGGATCTGGCATTGACGACCATAATCCTA
AACATTGCGGGAGCGTTACC

Downstream 100 bases:

>100_bases
GTACGGGCGGAGGATTGACTAATGACCAGTTCCATGCTGTTCAACATCACGACGTTCACCTACCTGGTCTCCATGCTCGC
TTTTTTTGCCTTCCTGGCGA

Product: ResB-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MTTSDRGFLQALWDFFCSLKLAIFLLILLAATSIIGTIIPQQNPLPPEYIAAIGGTGSMKFKVYSTLGFFDMYHSWWFIL
LLYLFTVNIVACSIKRLPRVWKTISEPTLVMDEGFERTLTLTHDFKKEGDAADLNEKMKAFLKSEFAEPVVTERDGEFHL
FAQKSPYSRLGVYVVHLSIVIIFIGALLGSFFGYKAYVNIVEGSGASTVMSRKGVPIDLGFTVKCEDFSVSFYDTGAPKE
FKSLLTVIDGGKVVIDKRPVIVNEPLTYKGITFYQSSYGPADEGGLYHLTVRERKGGAPVRLSLSMGERKVLPDGSAVQL
LEATDEIGRFIPQFRGPAVRVAVEPKSGEPQAFIVFQNYPEFDVQRGADHIFTYEGADLKMFTGLQVAKDPGVWVVWLGC
TLMVVGCCMAFFMSHKRIWIRVRKGHVTLGGTANKNQPGFQLAFDTLVDKLKTL

Sequences:

>Translated_454_residues
MTTSDRGFLQALWDFFCSLKLAIFLLILLAATSIIGTIIPQQNPLPPEYIAAIGGTGSMKFKVYSTLGFFDMYHSWWFIL
LLYLFTVNIVACSIKRLPRVWKTISEPTLVMDEGFERTLTLTHDFKKEGDAADLNEKMKAFLKSEFAEPVVTERDGEFHL
FAQKSPYSRLGVYVVHLSIVIIFIGALLGSFFGYKAYVNIVEGSGASTVMSRKGVPIDLGFTVKCEDFSVSFYDTGAPKE
FKSLLTVIDGGKVVIDKRPVIVNEPLTYKGITFYQSSYGPADEGGLYHLTVRERKGGAPVRLSLSMGERKVLPDGSAVQL
LEATDEIGRFIPQFRGPAVRVAVEPKSGEPQAFIVFQNYPEFDVQRGADHIFTYEGADLKMFTGLQVAKDPGVWVVWLGC
TLMVVGCCMAFFMSHKRIWIRVRKGHVTLGGTANKNQPGFQLAFDTLVDKLKTL
>Mature_453_residues
TTSDRGFLQALWDFFCSLKLAIFLLILLAATSIIGTIIPQQNPLPPEYIAAIGGTGSMKFKVYSTLGFFDMYHSWWFILL
LYLFTVNIVACSIKRLPRVWKTISEPTLVMDEGFERTLTLTHDFKKEGDAADLNEKMKAFLKSEFAEPVVTERDGEFHLF
AQKSPYSRLGVYVVHLSIVIIFIGALLGSFFGYKAYVNIVEGSGASTVMSRKGVPIDLGFTVKCEDFSVSFYDTGAPKEF
KSLLTVIDGGKVVIDKRPVIVNEPLTYKGITFYQSSYGPADEGGLYHLTVRERKGGAPVRLSLSMGERKVLPDGSAVQLL
EATDEIGRFIPQFRGPAVRVAVEPKSGEPQAFIVFQNYPEFDVQRGADHIFTYEGADLKMFTGLQVAKDPGVWVVWLGCT
LMVVGCCMAFFMSHKRIWIRVRKGHVTLGGTANKNQPGFQLAFDTLVDKLKTL

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 50555; Mature: 50424

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSDRGFLQALWDFFCSLKLAIFLLILLAATSIIGTIIPQQNPLPPEYIAAIGGTGSMK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCEE
FKVYSTLGFFDMYHSWWFILLLYLFTVNIVACSIKRLPRVWKTISEPTLVMDEGFERTLT
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEE
LTHDFKKEGDAADLNEKMKAFLKSEFAEPVVTERDGEFHLFAQKSPYSRLGVYVVHLSIV
EEECCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHH
IIFIGALLGSFFGYKAYVNIVEGSGASTVMSRKGVPIDLGFTVKCEDFSVSFYDTGAPKE
HHHHHHHHHHHCCCEEEEEEEECCCCHHHHHCCCCEEECCEEEEECCEEEEEECCCCCHH
FKSLLTVIDGGKVVIDKRPVIVNEPLTYKGITFYQSSYGPADEGGLYHLTVRERKGGAPV
HHHHHHHCCCCEEEEECCCEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCE
RLSLSMGERKVLPDGSAVQLLEATDEIGRFIPQFRGPAVRVAVEPKSGEPQAFIVFQNYP
EEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCC
EFDVQRGADHIFTYEGADLKMFTGLQVAKDPGVWVVWLGCTLMVVGCCMAFFMSHKRIWI
CCHHHCCCCEEEEECCCCEEEEECCEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEE
RVRKGHVTLGGTANKNQPGFQLAFDTLVDKLKTL
EEEECEEEECCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTSDRGFLQALWDFFCSLKLAIFLLILLAATSIIGTIIPQQNPLPPEYIAAIGGTGSMK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCEE
FKVYSTLGFFDMYHSWWFILLLYLFTVNIVACSIKRLPRVWKTISEPTLVMDEGFERTLT
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEE
LTHDFKKEGDAADLNEKMKAFLKSEFAEPVVTERDGEFHLFAQKSPYSRLGVYVVHLSIV
EEECCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHH
IIFIGALLGSFFGYKAYVNIVEGSGASTVMSRKGVPIDLGFTVKCEDFSVSFYDTGAPKE
HHHHHHHHHHHCCCEEEEEEEECCCCHHHHHCCCCEEECCEEEEECCEEEEEECCCCCHH
FKSLLTVIDGGKVVIDKRPVIVNEPLTYKGITFYQSSYGPADEGGLYHLTVRERKGGAPV
HHHHHHHCCCCEEEEECCCEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCE
RLSLSMGERKVLPDGSAVQLLEATDEIGRFIPQFRGPAVRVAVEPKSGEPQAFIVFQNYP
EEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCC
EFDVQRGADHIFTYEGADLKMFTGLQVAKDPGVWVVWLGCTLMVVGCCMAFFMSHKRIWI
CCHHHCCCCEEEEECCCCEEEEECCEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEE
RVRKGHVTLGGTANKNQPGFQLAFDTLVDKLKTL
EEEECEEEECCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA