| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995715
Identifier: 39995715
GI number: 39995715
Start: 643240
End: 644520
Strand: Direct
Name: 39995715
Synonym: GSU0608
Alternate gene names: NA
Gene position: 643240-644520 (Clockwise)
Preceding gene: 39995714
Following gene: 39995716
Centisome position: 16.86
GC content: 65.89
Gene sequence:
>1281_bases TTGACATCGTCTGACTCCAACGTTGATCCAGGCCTCGGCATTGCCGTTGACCTGGGCACCACTACCCTTGCCGCTTCGCT GGTCGATCTTTCATCCGGGGAAAGACTGGCTTCCGCCGGGTCTCTGAACCCCCAGCGGGAATTCGGCGCCGACGTGGTCT CGCGGCTCGATGCCGCCTGTCGTTCCGGTGAGGCACTGCAACGCATGGCCGCGCTGGTCAGGGAGGAGTTGTACCGCCTC GCGGCCCGTCTGCTCGACAGCGCCGGCGAGGCACGGGACCGCCTGCGCATGGTGGCTGTGGCCGGCAATCCCGCCATGGA ACACCTCCTGCTCGGACTACCCGTTGTCCGGCTGGCATACCCCCCCTACCGCCCGCTGTTCTCGACCTCCACGCATATTT CCGCGGCAGACCTGGGGTGGGACCTGTCCGGCCGGGTCGCGCTCTTCCCGCTGCCGGGCGGCTTTGTGGGCGGCGATACG GTAGCCTTCTTGTTCGGTGTTCCCGATGTGTGTGCCCCGTGCCCTGGTCCCCGTCTGTTTCTGGACATGGGAACCAATGG CGAGATGGTTCTCCAGTGCGGTGATGTGCTGCTGGGCACATCGGCCGCCGCCGGTCCCGCCTTCGAGGGGGGAGGGCTCG CCTGCGGCATGGCTGCCCTGCCGGGGGCCGTGAACGGCATCATCCGGGATGGAGACCGCGTGCGCGTCACGACGATCGGA GGCGGCCAGCCCCTCGGTATCTGCGGTTCTGCGGTGCTGGACACGGTTGCGCTTCTTCTGGAAGAGGGGCTTCTGGACTC CACCGGCCGCCTTCTGCCGCCGGAAGAGATCGCGTCACCTGTCGGCGCCCGCATGGGAACGGTGGGCGGGGAGCCCGCGT TCATTCTTCATCGGGATGCGGCGCGGACCATCTATCTCTCCCAGGGGGATATCCGCCAGGTGCAGCTCGCCAAGGGGGCA ATCCGCGCCGGCATGGAGGTCCTGTGCGAACGGGCCCGCATCCGGTGTGAGGATATTGAAGAGGTTGTCCTGACCGGCTC TTTCGGCGCGGTTCTCTCACCCCGGAGCCTAAAATTCATTGGAATTTTCACGGAAAAGATGGTACAAACGACCCGTTTCG TCCGGGAGGGTGCCTTGGCCGGTGCCGAAAGGGCACTGACCGCCCCGGAGGGGTTCGAGGCCGTTGACCGACTGGCCCGG GCGCTCCGGGTCATCCCCCTCTCGGGTACGCCTGCCTTCGAGAAACACTTTCTGAAGCACATCGACTTCCCGTCTCGCTA A
Upstream 100 bases:
>100_bases TTGTCTCCGTCCTCCGCCGGCCGGTTCCTCGCTGCGGCCGGCGACCGGGGGCTGTTTGCCCTGGAGGTGGGGGAGGTCCT CCCCGCCGGGGAGTGCGCCG
Downstream 100 bases:
>100_bases CATCCGCCACGGAGCTCCGTGGTGATCTCAGCTCATGTCAAAGGGGTAAACCATGGCAAAGATAACACGTGCGCTCATCA GCGTCTCGGACAAGACCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Electron Transfer Protein; Vitamin; Corrinoid Activation/Regeneration Protein; Flavoprotein; Ferredoxin Domain-Containing Protein; Iron-Sulfur Protein; Ferredoxin-Containing Protein; ATP Synthase F0 A Subunit; Activating; Methylamine Methyltransferase Corrinoid Activation Protein
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTSSDSNVDPGLGIAVDLGTTTLAASLVDLSSGERLASAGSLNPQREFGADVVSRLDAACRSGEALQRMAALVREELYRL AARLLDSAGEARDRLRMVAVAGNPAMEHLLLGLPVVRLAYPPYRPLFSTSTHISAADLGWDLSGRVALFPLPGGFVGGDT VAFLFGVPDVCAPCPGPRLFLDMGTNGEMVLQCGDVLLGTSAAAGPAFEGGGLACGMAALPGAVNGIIRDGDRVRVTTIG GGQPLGICGSAVLDTVALLLEEGLLDSTGRLLPPEEIASPVGARMGTVGGEPAFILHRDAARTIYLSQGDIRQVQLAKGA IRAGMEVLCERARIRCEDIEEVVLTGSFGAVLSPRSLKFIGIFTEKMVQTTRFVREGALAGAERALTAPEGFEAVDRLAR ALRVIPLSGTPAFEKHFLKHIDFPSR
Sequences:
>Translated_426_residues MTSSDSNVDPGLGIAVDLGTTTLAASLVDLSSGERLASAGSLNPQREFGADVVSRLDAACRSGEALQRMAALVREELYRL AARLLDSAGEARDRLRMVAVAGNPAMEHLLLGLPVVRLAYPPYRPLFSTSTHISAADLGWDLSGRVALFPLPGGFVGGDT VAFLFGVPDVCAPCPGPRLFLDMGTNGEMVLQCGDVLLGTSAAAGPAFEGGGLACGMAALPGAVNGIIRDGDRVRVTTIG GGQPLGICGSAVLDTVALLLEEGLLDSTGRLLPPEEIASPVGARMGTVGGEPAFILHRDAARTIYLSQGDIRQVQLAKGA IRAGMEVLCERARIRCEDIEEVVLTGSFGAVLSPRSLKFIGIFTEKMVQTTRFVREGALAGAERALTAPEGFEAVDRLAR ALRVIPLSGTPAFEKHFLKHIDFPSR >Mature_425_residues TSSDSNVDPGLGIAVDLGTTTLAASLVDLSSGERLASAGSLNPQREFGADVVSRLDAACRSGEALQRMAALVREELYRLA ARLLDSAGEARDRLRMVAVAGNPAMEHLLLGLPVVRLAYPPYRPLFSTSTHISAADLGWDLSGRVALFPLPGGFVGGDTV AFLFGVPDVCAPCPGPRLFLDMGTNGEMVLQCGDVLLGTSAAAGPAFEGGGLACGMAALPGAVNGIIRDGDRVRVTTIGG GQPLGICGSAVLDTVALLLEEGLLDSTGRLLPPEEIASPVGARMGTVGGEPAFILHRDAARTIYLSQGDIRQVQLAKGAI RAGMEVLCERARIRCEDIEEVVLTGSFGAVLSPRSLKFIGIFTEKMVQTTRFVREGALAGAERALTAPEGFEAVDRLARA LRVIPLSGTPAFEKHFLKHIDFPSR
Specific function: Unknown
COG id: COG3894
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44584; Mature: 44453
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSDSNVDPGLGIAVDLGTTTLAASLVDLSSGERLASAGSLNPQREFGADVVSRLDAAC CCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH RSGEALQRMAALVREELYRLAARLLDSAGEARDRLRMVAVAGNPAMEHLLLGLPVVRLAY CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEECCHHHHHHHHHCCHHHHCC PPYRPLFSTSTHISAADLGWDLSGRVALFPLPGGFVGGDTVAFLFGVPDVCAPCPGPRLF CCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCHHHCCCCCCEEE LDMGTNGEMVLQCGDVLLGTSAAAGPAFEGGGLACGMAALPGAVNGIIRDGDRVRVTTIG EEECCCCCEEEEECCEEEECCCCCCCCCCCCCCEEHHHHCCHHHHHHEECCCEEEEEEEC GGQPLGICGSAVLDTVALLLEEGLLDSTGRLLPPEEIASPVGARMGTVGGEPAFILHRDA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHHCCCCCCCEEEEEECC ARTIYLSQGDIRQVQLAKGAIRAGMEVLCERARIRCEDIEEVVLTGSFGAVLSPRSLKFI CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHEEEECCCCCEECCCCEEEE GIFTEKMVQTTRFVREGALAGAERALTAPEGFEAVDRLARALRVIPLSGTPAFEKHFLKH EHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHH IDFPSR CCCCCC >Mature Secondary Structure TSSDSNVDPGLGIAVDLGTTTLAASLVDLSSGERLASAGSLNPQREFGADVVSRLDAAC CCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH RSGEALQRMAALVREELYRLAARLLDSAGEARDRLRMVAVAGNPAMEHLLLGLPVVRLAY CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEECCHHHHHHHHHCCHHHHCC PPYRPLFSTSTHISAADLGWDLSGRVALFPLPGGFVGGDTVAFLFGVPDVCAPCPGPRLF CCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCHHHCCCCCCEEE LDMGTNGEMVLQCGDVLLGTSAAAGPAFEGGGLACGMAALPGAVNGIIRDGDRVRVTTIG EEECCCCCEEEEECCEEEECCCCCCCCCCCCCCEEHHHHCCHHHHHHEECCCEEEEEEEC GGQPLGICGSAVLDTVALLLEEGLLDSTGRLLPPEEIASPVGARMGTVGGEPAFILHRDA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHHCCCCCCCEEEEEECC ARTIYLSQGDIRQVQLAKGAIRAGMEVLCERARIRCEDIEEVVLTGSFGAVLSPRSLKFI CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHEEEECCCCCEECCCCEEEE GIFTEKMVQTTRFVREGALAGAERALTAPEGFEAVDRLARALRVIPLSGTPAFEKHFLKH EHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHH IDFPSR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA