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The map label for this gene is selD [H]

Identifier: 39995714

GI number: 39995714

Start: 642216

End: 643253

Strand: Direct

Name: selD [H]

Synonym: GSU0607

Alternate gene names: 39995714

Gene position: 642216-643253 (Clockwise)

Preceding gene: 39995713

Following gene: 39995715

Centisome position: 16.84

GC content: 69.17

Gene sequence:

>1038_bases
ATGACCGAAGGCATCAAGCTGACATCGCTCGTCAAAGCAGCCGGCTGAGCGGCCAAGCTGGGCCCGGCGGGCCTGGAACA
AGCGCTGAGCGACATGGTTCGGGAAGACGATCCGAATCTGCTGGTGGGGCCGGAAACCGCCGACGACGCGGGGGTGTACC
GGATAGGGGAGGGGCTCGCCCTGGTGGAGACGGTGGACATCATCACCCCACTGGTGGATGATCCCTACACCTTCGGCCGG
ATCGCGGCGGCCAATGCCCTGTCGGATGTCTTCGCCATGGGCGGCCGGCCGGTCACGGCCATGAACCTCGTCTTCTTCCC
GGCGTGCGCGCTACCGGGGTCGGTCCTTTCCGCCATTCTGGCCGGCGGGCACGACGCCCTGCGCGAGGCGGGGGCCTGTC
TCGTGGGCGGCCATACGGTGGAGGACGACGAGCTCAAGTACGGCCTGGCCGTGACCGGACTCATCAGTCCGTCGCGCGTG
GTGCGCAATGCCACTGCACGTGCCGGGGACCGGCTGGTGCTCACCAAGCCGCTCGGCACCGGCATCGTCTCGACGGCAAT
CAAGGCCGACATGGCACCGGCTGCGCTCACGGCCGAAGCCGTCCGCTGGATGACCATGCTGAACGCCGAAGCCGCGGGGC
TCATGCTCGAGTGCGGGGCCTCCGCCTGTACCGACGTGACCGGTTTCGGCCTGGTCGGACACGCCTGCGAGGTGGCTCGG
GGGGCAGGAGTGACCCTGCGTCTTCACCTGGAACAGGTGCCGGTGCTGGACGGCGTCATGGGCCTGGTGGCCGACGGGCT
CGTGCCGGCCGGCTGCTATCGCAACAGGGATCACTATGCACCCTTTGTCGGCGCGCCCCGCAGCGACGACGACCGGCTTC
TTCCCCTCTTCGATCCCCAGACATCGGGGGGGCTCCTCCTGTCCTTGTCTCCGTCCTCCGCCGGCCGGTTCCTCGCTGCG
GCCGGCGACCGGGGGCTGTTTGCCCTGGAGGTGGGGGAGGTCCTCCCCGCCGGGGAGTGCGCCGTTGACATCGTCTGA

Upstream 100 bases:

>100_bases
GGTACCATCCCCTACGAAATTTTCTGCGGCATCAGCAAGCGGGTGCCGCGCGTCTACCTCAACCCGTCGATCAGGCACAG
GTGAGAGAAGGGAAACTCCG

Downstream 100 bases:

>100_bases
CTCCAACGTTGATCCAGGCCTCGGCATTGCCGTTGACCTGGGCACCACTACCCTTGCCGCTTCGCTGGTCGATCTTTCAT
CCGGGGAAAGACTGGCTTCC

Product: selenide, water dikinase, selenocysteine-containing

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MTEGIKLTSLVKAAGUAAKLGPAGLEQALSDMVREDDPNLLVGPETADDAGVYRIGEGLALVETVDIITPLVDDPYTFGR
IAAANALSDVFAMGGRPVTAMNLVFFPACALPGSVLSAILAGGHDALREAGACLVGGHTVEDDELKYGLAVTGLISPSRV
VRNATARAGDRLVLTKPLGTGIVSTAIKADMAPAALTAEAVRWMTMLNAEAAGLMLECGASACTDVTGFGLVGHACEVAR
GAGVTLRLHLEQVPVLDGVMGLVADGLVPAGCYRNRDHYAPFVGAPRSDDDRLLPLFDPQTSGGLLLSLSPSSAGRFLAA
AGDRGLFALEVGEVLPAGECAVDIV

Sequences:

>Translated_345_residues
MTEGIKLTSLVKAAG*AAKLGPAGLEQALSDMVREDDPNLLVGPETADDAGVYRIGEGLALVETVDIITPLVDDPYTFGR
IAAANALSDVFAMGGRPVTAMNLVFFPACALPGSVLSAILAGGHDALREAGACLVGGHTVEDDELKYGLAVTGLISPSRV
VRNATARAGDRLVLTKPLGTGIVSTAIKADMAPAALTAEAVRWMTMLNAEAAGLMLECGASACTDVTGFGLVGHACEVAR
GAGVTLRLHLEQVPVLDGVMGLVADGLVPAGCYRNRDHYAPFVGAPRSDDDRLLPLFDPQTSGGLLLSLSPSSAGRFLAA
AGDRGLFALEVGEVLPAGECAVDIV
>Mature_344_residues
TEGIKLTSLVKAAG*AAKLGPAGLEQALSDMVREDDPNLLVGPETADDAGVYRIGEGLALVETVDIITPLVDDPYTFGRI
AAANALSDVFAMGGRPVTAMNLVFFPACALPGSVLSAILAGGHDALREAGACLVGGHTVEDDELKYGLAVTGLISPSRVV
RNATARAGDRLVLTKPLGTGIVSTAIKADMAPAALTAEAVRWMTMLNAEAAGLMLECGASACTDVTGFGLVGHACEVARG
AGVTLRLHLEQVPVLDGVMGLVADGLVPAGCYRNRDHYAPFVGAPRSDDDRLLPLFDPQTSGGLLLSLSPSSAGRFLAAA
GDRGLFALEVGEVLPAGECAVDIV

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=287, Percent_Identity=33.4494773519164, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI15011844, Length=279, Percent_Identity=31.8996415770609, Blast_Score=112, Evalue=7e-25,
Organism=Escherichia coli, GI1788062, Length=349, Percent_Identity=42.6934097421203, Blast_Score=249, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI17543426, Length=280, Percent_Identity=31.4285714285714, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24653602, Length=218, Percent_Identity=33.9449541284404, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24653604, Length=218, Percent_Identity=33.9449541284404, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI28574119, Length=322, Percent_Identity=26.7080745341615, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28574118, Length=218, Percent_Identity=30.2752293577982, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 35125; Mature: 34994

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGIKLTSLVKAAGAAKLGPAGLEQALSDMVREDDPNLLVGPETADDAGVYRIGEGLAL
CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCEEE
VETVDIITPLVDDPYTFGRIAAANALSDVFAMGGRPVTAMNLVFFPACALPGSVLSAILA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCHHHHHHHHH
GGHDALREAGACLVGGHTVEDDELKYGLAVTGLISPSRVVRNATARAGDRLVLTKPLGTG
CCHHHHHHCCCEEECCEECCCCCEEECEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCH
IVSTAIKADMAPAALTAEAVRWMTMLNAEAAGLMLECGASACTDVTGFGLVGHACEVARG
HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCEEEECCCCHHCCCCCCCHHHHHHHHHCC
AGVTLRLHLEQVPVLDGVMGLVADGLVPAGCYRNRDHYAPFVGAPRSDDDRLLPLFDPQT
CCEEEEEEECCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
SGGLLLSLSPSSAGRFLAAAGDRGLFALEVGEVLPAGECAVDIV
CCCEEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEECC
>Mature Secondary Structure 
TEGIKLTSLVKAAGAAKLGPAGLEQALSDMVREDDPNLLVGPETADDAGVYRIGEGLAL
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCEEE
VETVDIITPLVDDPYTFGRIAAANALSDVFAMGGRPVTAMNLVFFPACALPGSVLSAILA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCHHHHHHHHH
GGHDALREAGACLVGGHTVEDDELKYGLAVTGLISPSRVVRNATARAGDRLVLTKPLGTG
CCHHHHHHCCCEEECCEECCCCCEEECEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCH
IVSTAIKADMAPAALTAEAVRWMTMLNAEAAGLMLECGASACTDVTGFGLVGHACEVARG
HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCEEEECCCCHHCCCCCCCHHHHHHHHHCC
AGVTLRLHLEQVPVLDGVMGLVADGLVPAGCYRNRDHYAPFVGAPRSDDDRLLPLFDPQT
CCEEEEEEECCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
SGGLLLSLSPSSAGRFLAAAGDRGLFALEVGEVLPAGECAVDIV
CCCEEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA