| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is thiG
Identifier: 39995695
GI number: 39995695
Start: 621450
End: 622232
Strand: Reverse
Name: thiG
Synonym: GSU0588
Alternate gene names: 39995695
Gene position: 622232-621450 (Counterclockwise)
Preceding gene: 39995696
Following gene: 39995694
Centisome position: 16.31
GC content: 60.79
Gene sequence:
>783_bases ATGTCCAATGCAGCCGATAAACTGGTCATCGCCGGCCGCGAGTTTTCCTCCCGCCTCATGGTCGGCACCGGCAAGTACGC CAGCAACGAGCAGATGATCAAGGCCCTGGAGGTTTCAGGCGCAGAAATCATTACGGTGGCGGTACGTCGGGTGAATCTGG CCGACCGGGGCAAAGGGTGCCTGCTTGACTTCATCGATCCGAAAAAGTACACGCTCCTGCCCAACACCGCCGGCTGCTAC ACGGCCGATGACGCGGTCAGAACCTGCCGACTGGCCCGGGAGGCCGGCATGAGCGATCTGGTGAAGCTGGAGGTGCTCGG CGACGAGAAGACCCTCTTCCCTGACAATGAAGAACTGCTCAAGGCAGCAAAAATCTTGGTGAAGGAAGGGTTTACCGTCC TTCCCTACACCAGCGACGATCCCATTGTCTGCAAAAAGCTTGAAGATATCGGCTGTGCCGCGGTCATGCCGCTGGGCGCC CCCATCGGCAGCGGCCTGGGCATTCGGAATCCGTACAACATCCTGATCATCAAGGAAACGGTCAAGGTGCCGGTCATCGT CGATGCCGGTGTCGGCACCGCCTCCGACGCCGCCATCGCCATGGAGTTGGGCATCGACGGAGTTCTCATGAATACCGGCA TCGCCGGCGCCAGGGATCCCATCGCCATGGCAGAGGCAATGAACATGGCGGTGCGGGCCGGCCGGCTCGCCTACCTGGCG GGACGCATTCCCAAGAAACTCTATGCCACGGCATCGAGCCCCATCGAGGGGATGATTGGCTAA
Upstream 100 bases:
>100_bases AAATCGTCCACTTCGTAGGTGGCGGGTAAGGTCGGCCGCATCGGTCCGCCCCAGCGCCCGACAATGCGTCGCGATTCAAA CACTTCAAGGAGATTACACC
Downstream 100 bases:
>100_bases GGTCGATTTTTCGCTCTACCTGATCACCGACCGCCACCAGGCTGGTGGCAGGGACCTGCTCGCCGTGGTCGAGGGAGCCC TGGCCGGTGGCGTGCGGTGC
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSNAADKLVIAGREFSSRLMVGTGKYASNEQMIKALEVSGAEIITVAVRRVNLADRGKGCLLDFIDPKKYTLLPNTAGCY TADDAVRTCRLAREAGMSDLVKLEVLGDEKTLFPDNEELLKAAKILVKEGFTVLPYTSDDPIVCKKLEDIGCAAVMPLGA PIGSGLGIRNPYNILIIKETVKVPVIVDAGVGTASDAAIAMELGIDGVLMNTGIAGARDPIAMAEAMNMAVRAGRLAYLA GRIPKKLYATASSPIEGMIG
Sequences:
>Translated_260_residues MSNAADKLVIAGREFSSRLMVGTGKYASNEQMIKALEVSGAEIITVAVRRVNLADRGKGCLLDFIDPKKYTLLPNTAGCY TADDAVRTCRLAREAGMSDLVKLEVLGDEKTLFPDNEELLKAAKILVKEGFTVLPYTSDDPIVCKKLEDIGCAAVMPLGA PIGSGLGIRNPYNILIIKETVKVPVIVDAGVGTASDAAIAMELGIDGVLMNTGIAGARDPIAMAEAMNMAVRAGRLAYLA GRIPKKLYATASSPIEGMIG >Mature_259_residues SNAADKLVIAGREFSSRLMVGTGKYASNEQMIKALEVSGAEIITVAVRRVNLADRGKGCLLDFIDPKKYTLLPNTAGCYT ADDAVRTCRLAREAGMSDLVKLEVLGDEKTLFPDNEELLKAAKILVKEGFTVLPYTSDDPIVCKKLEDIGCAAVMPLGAP IGSGLGIRNPYNILIIKETVKVPVIVDAGVGTASDAAIAMELGIDGVLMNTGIAGARDPIAMAEAMNMAVRAGRLAYLAG RIPKKLYATASSPIEGMIG
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family
Homologues:
Organism=Escherichia coli, GI48994993, Length=252, Percent_Identity=47.6190476190476, Blast_Score=232, Evalue=2e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIG_GEOSL (Q74FL9)
Other databases:
- EMBL: AE017180 - RefSeq: NP_951646.1 - ProteinModelPortal: Q74FL9 - SMR: Q74FL9 - GeneID: 2685792 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU0588 - NMPDR: fig|243231.1.peg.584 - TIGR: GSU0588 - HOGENOM: HBG296821 - OMA: VAIRRTN - ProtClustDB: PRK00208 - BioCyc: GSUL243231:GSU_0588-MONOMER - GO: GO:0005737 - HAMAP: MF_00443 - InterPro: IPR013785 - InterPro: IPR008867 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF05690 ThiG; SSF110399 ThiG
EC number: NA
Molecular weight: Translated: 27432; Mature: 27301
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: ACT_SITE 102-102 BINDING 163-163
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAADKLVIAGREFSSRLMVGTGKYASNEQMIKALEVSGAEIITVAVRRVNLADRGKGC CCCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEEHCCCCCCCCCE LLDFIDPKKYTLLPNTAGCYTADDAVRTCRLAREAGMSDLVKLEVLGDEKTLFPDNEELL EEEEECCCCEEECCCCCCCEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHH KAAKILVKEGFTVLPYTSDDPIVCKKLEDIGCAAVMPLGAPIGSGLGIRNPYNILIIKET HHHHHHHHCCCEEEEECCCCCCEEEHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEEC VKVPVIVDAGVGTASDAAIAMELGIDGVLMNTGIAGARDPIAMAEAMNMAVRAGRLAYLA CEEEEEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHH GRIPKKLYATASSPIEGMIG HCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure SNAADKLVIAGREFSSRLMVGTGKYASNEQMIKALEVSGAEIITVAVRRVNLADRGKGC CCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEEHCCCCCCCCCE LLDFIDPKKYTLLPNTAGCYTADDAVRTCRLAREAGMSDLVKLEVLGDEKTLFPDNEELL EEEEECCCCEEECCCCCCCEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHH KAAKILVKEGFTVLPYTSDDPIVCKKLEDIGCAAVMPLGAPIGSGLGIRNPYNILIIKET HHHHHHHHCCCEEEEECCCCCCEEEHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEEC VKVPVIVDAGVGTASDAAIAMELGIDGVLMNTGIAGARDPIAMAEAMNMAVRAGRLAYLA CEEEEEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHH GRIPKKLYATASSPIEGMIG HCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA