| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is thiE
Identifier: 39995694
GI number: 39995694
Start: 620816
End: 621457
Strand: Reverse
Name: thiE
Synonym: GSU0587
Alternate gene names: 39995694
Gene position: 621457-620816 (Counterclockwise)
Preceding gene: 39995695
Following gene: 39995693
Centisome position: 16.29
GC content: 68.22
Gene sequence:
>642_bases TTGGCTAAGGTCGATTTTTCGCTCTACCTGATCACCGACCGCCACCAGGCTGGTGGCAGGGACCTGCTCGCCGTGGTCGA GGGAGCCCTGGCCGGTGGCGTGCGGTGCGTTCAACTCAGGGAAAAGGACCTGCCGGCCCGGACGCTGCTTGAGCTGGCCC GGGCCATGCGCCGCCTCACCGACCGCTTCGGGGCCAGGCTCCTGATCAACGACCGGGTCGACATCGCCCTGGCCGCGGGA GCCGACGGCGTTCACCTGGGCGAGGAGGGCATGCCGGCTGCCGTGGCGCGGGAACTGCTCGGTTCCGGGCGACTCATCGG TGTTTCGTGTCACGGCCGCGGCGGGGCAGCAGCAGCCGTAGCACAGGGGGCAGACTTCATCACGTTCGGGCCGGTCTACC CCACCCCGTCGAAAGCAGCCTACGGTGAGCCGGTGGGCATTGACCAACTGGCCGCAACGACGAAGGAGATACACATTCCG GTGTTCGCCTTGGGAGGAATCAAGGAGGCGAACATCCCCGAGGCGCTGGCTGCCGGTGCGGCAGGGGTTGCCCTGATTTC TGCCATCATCGCCGACCCGGACCCCAGGGAACGCGCCCGGGCGCTCCTTGCGCTCCTGCCGCCCCGAACCCGAGACGAGT AA
Upstream 100 bases:
>100_bases GCAATGAACATGGCGGTGCGGGCCGGCCGGCTCGCCTACCTGGCGGGACGCATTCCCAAGAAACTCTATGCCACGGCATC GAGCCCCATCGAGGGGATGA
Downstream 100 bases:
>100_bases GCCATGTCAGACCTGTTCATACATCCCGAGCTTCGCTTCCACTCCTACGGCACCTGGCTGCGCCGCCGCTTCGGCTGCAA CGTGAGCAAGGTGAACGTGG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MAKVDFSLYLITDRHQAGGRDLLAVVEGALAGGVRCVQLREKDLPARTLLELARAMRRLTDRFGARLLINDRVDIALAAG ADGVHLGEEGMPAAVARELLGSGRLIGVSCHGRGGAAAAVAQGADFITFGPVYPTPSKAAYGEPVGIDQLAATTKEIHIP VFALGGIKEANIPEALAAGAAGVALISAIIADPDPRERARALLALLPPRTRDE
Sequences:
>Translated_213_residues MAKVDFSLYLITDRHQAGGRDLLAVVEGALAGGVRCVQLREKDLPARTLLELARAMRRLTDRFGARLLINDRVDIALAAG ADGVHLGEEGMPAAVARELLGSGRLIGVSCHGRGGAAAAVAQGADFITFGPVYPTPSKAAYGEPVGIDQLAATTKEIHIP VFALGGIKEANIPEALAAGAAGVALISAIIADPDPRERARALLALLPPRTRDE >Mature_212_residues AKVDFSLYLITDRHQAGGRDLLAVVEGALAGGVRCVQLREKDLPARTLLELARAMRRLTDRFGARLLINDRVDIALAAGA DGVHLGEEGMPAAVARELLGSGRLIGVSCHGRGGAAAAVAQGADFITFGPVYPTPSKAAYGEPVGIDQLAATTKEIHIPV FALGGIKEANIPEALAAGAAGVALISAIIADPDPRERARALLALLPPRTRDE
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=177, Percent_Identity=35.0282485875706, Blast_Score=90, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6325042, Length=224, Percent_Identity=33.4821428571429, Blast_Score=110, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THE2_GEOSL (P61411)
Other databases:
- EMBL: AE017180 - RefSeq: NP_951645.1 - ProteinModelPortal: P61411 - GeneID: 2685827 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU0587 - NMPDR: fig|243231.1.peg.583 - TIGR: GSU0587 - HOGENOM: HBG754477 - OMA: FITFGPV - ProtClustDB: CLSK827931 - BioCyc: GSUL243231:GSU_0587-MONOMER - BRENDA: 2.5.1.3 - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 22139; Mature: 22008
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVDFSLYLITDRHQAGGRDLLAVVEGALAGGVRCVQLREKDLPARTLLELARAMRRLT CCEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHH DRFGARLLINDRVDIALAAGADGVHLGEEGMPAAVARELLGSGRLIGVSCHGRGGAAAAV HHHCCEEEEECCEEEEEECCCCCCEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHH AQGADFITFGPVYPTPSKAAYGEPVGIDQLAATTKEIHIPVFALGGIKEANIPEALAAGA HCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHHCH AGVALISAIIADPDPRERARALLALLPPRTRDE HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AKVDFSLYLITDRHQAGGRDLLAVVEGALAGGVRCVQLREKDLPARTLLELARAMRRLT CEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHH DRFGARLLINDRVDIALAAGADGVHLGEEGMPAAVARELLGSGRLIGVSCHGRGGAAAAV HHHCCEEEEECCEEEEEECCCCCCEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHH AQGADFITFGPVYPTPSKAAYGEPVGIDQLAATTKEIHIPVFALGGIKEANIPEALAAGA HCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHHCH AGVALISAIIADPDPRERARALLALLPPRTRDE HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA