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The map label for this gene is yyaP [H]

Identifier: 39995669

GI number: 39995669

Start: 594226

End: 594822

Strand: Direct

Name: yyaP [H]

Synonym: GSU0562

Alternate gene names: 39995669

Gene position: 594226-594822 (Clockwise)

Preceding gene: 39995668

Following gene: 39995670

Centisome position: 15.58

GC content: 54.77

Gene sequence:

>597_bases
ATGCGAAAAATCATCGCTCTTGAATTTGTTTCCCTCGATGGGGTCATCCAAGCGCCGGGCGGGCCGCAGGAGGATACCGA
CGGTAACTTCAAGTATGGCGGCTGGATTGTGCCCTATTTCGACGAGCGAAGTGGCGACATTATGCAGGAGCAGATGTCCA
GAACGCGCGCTCTTTTGCTCGGAAGAAAGACCTACGAAATATTCGCCTCCTATTGGCCGACACACGAAAGCGCGTGGCCG
GGCATCAACTCGGCGACGAAGTACGTTGTTTCGGATACGCTTACAGAGTCGCTTTGGGACAACACGGTCATTATCAAAGA
TCACGTCGTGGAAGAAATACGGAGATTGAAGCAGCAAGTCGGCCCTGACCTACAGGTGTATGGCAGTAGCAACCTTCTCC
AGACGCTCTTACAGCATGACCTGGCAGATGAGTTGTGGCTCAAGATTTTTCCTGTTACCCTCGGCACGGGCAAGCGTCTT
TTCGGCGAAGGGACGATGCCGGCGGCATTCACGCTCATGCACTCTGAGGCAACGCCACGTGGTGTCATCGTCGCCAATTA
CGAGCGTGCCGGTGAGGTGCAGACGGGCTCGTTTTGA

Upstream 100 bases:

>100_bases
ACAAGCGGCGGCAGACGGACAAGCCGCTGCGCCTTGAGACGTTATGGTTGCCCCAGCATTGCGGAATGAAAAAAAACAAC
GCACATAAAGGAAAATAGCC

Downstream 100 bases:

>100_bases
GCTTGGATTTTCATTGCATCCGCGCAGCGGAATGCATCGCCGCCTGCAACGGGTTGGGACGGTCTACGGGGACATGGTTG
ATTAGTTGAGTAGCGAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRKIIALEFVSLDGVIQAPGGPQEDTDGNFKYGGWIVPYFDERSGDIMQEQMSRTRALLLGRKTYEIFASYWPTHESAWP
GINSATKYVVSDTLTESLWDNTVIIKDHVVEEIRRLKQQVGPDLQVYGSSNLLQTLLQHDLADELWLKIFPVTLGTGKRL
FGEGTMPAAFTLMHSEATPRGVIVANYERAGEVQTGSF

Sequences:

>Translated_198_residues
MRKIIALEFVSLDGVIQAPGGPQEDTDGNFKYGGWIVPYFDERSGDIMQEQMSRTRALLLGRKTYEIFASYWPTHESAWP
GINSATKYVVSDTLTESLWDNTVIIKDHVVEEIRRLKQQVGPDLQVYGSSNLLQTLLQHDLADELWLKIFPVTLGTGKRL
FGEGTMPAAFTLMHSEATPRGVIVANYERAGEVQTGSF
>Mature_198_residues
MRKIIALEFVSLDGVIQAPGGPQEDTDGNFKYGGWIVPYFDERSGDIMQEQMSRTRALLLGRKTYEIFASYWPTHESAWP
GINSATKYVVSDTLTESLWDNTVIIKDHVVEEIRRLKQQVGPDLQVYGSSNLLQTLLQHDLADELWLKIFPVTLGTGKRL
FGEGTMPAAFTLMHSEATPRGVIVANYERAGEVQTGSF

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywjB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 22197; Mature: 22197

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIIALEFVSLDGVIQAPGGPQEDTDGNFKYGGWIVPYFDERSGDIMQEQMSRTRALLL
CCCEEEEEEEEECCEEECCCCCCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHH
GRKTYEIFASYWPTHESAWPGINSATKYVVSDTLTESLWDNTVIIKDHVVEEIRRLKQQV
CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
GPDLQVYGSSNLLQTLLQHDLADELWLKIFPVTLGTGKRLFGEGTMPAAFTLMHSEATPR
CCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCCCCCCEEEEEECCCCCC
GVIVANYERAGEVQTGSF
CEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRKIIALEFVSLDGVIQAPGGPQEDTDGNFKYGGWIVPYFDERSGDIMQEQMSRTRALLL
CCCEEEEEEEEECCEEECCCCCCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHH
GRKTYEIFASYWPTHESAWPGINSATKYVVSDTLTESLWDNTVIIKDHVVEEIRRLKQQV
CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
GPDLQVYGSSNLLQTLLQHDLADELWLKIFPVTLGTGKRLFGEGTMPAAFTLMHSEATPR
CCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCCCCCCEEEEEECCCCCC
GVIVANYERAGEVQTGSF
CEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]