| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995619
Identifier: 39995619
GI number: 39995619
Start: 545697
End: 547337
Strand: Direct
Name: 39995619
Synonym: GSU0512
Alternate gene names: NA
Gene position: 545697-547337 (Clockwise)
Preceding gene: 39995618
Following gene: 39995620
Centisome position: 14.31
GC content: 60.94
Gene sequence:
>1641_bases ATGGCCGGGGAGATAGAAGACGCAAAAGTCGGTCTCACCTTTCGGCTTGACGGTGGAGGGTACAAGCTCAGCGCGAGCTT TGTGCCGACCGATGAAAAACCGCCCATCAACCTCACTTGGATCAAGCAGGCTCTAGCCGCAGCGGGGTTTGCCGACCTCT ATCTCTACGAGCACGCCCTGGTGGAGCTGCTGAAGCGTTACAACGCCGCTAGCCAGCCGTTCACCTTTGACCTGGGCGAG CGTCGCAACGGTTCTTTCACCATCACCTGTACCCCCGATAACCTGGAAGCCCGTCTAACGATCATTCCGGCGTACGGCGG CAAAGCGGTCGCTGCGGAGCAGGTCAGGCAGGCACTGAAGGAAAAGGGGATCGTCTTCGGTGTTGACGAAGAGGCCATCA ATCGGGCCATTGCCGACGGCGTGGCCTCTGATCTCCTGGTGGCACGGGGAATACCACCCCAGTCGGGCACCGATGGTGAA CTGGTGAGCTTCGTTCCCGAGATCCGCGATCGCCAGCCTCAACTCCTCGATGATGACAGGGTCGACTACCGGAACCTGGG GCAGATTCTCAGTGTCCGTGCCGGCGAACCCCTCATGCGCCGCATTCCGCCCGTTGAGGGTGTTGCGGGGACCAGTATCA CGGGGAAAGCCATTTCCTCCCCGCCTGCACGGGATGTAGCCTTTGCCCCGAATCTACCGGGGACTGCCTTTGATGCTGAT GATCCCAACCTCCTCGTGGCCGCCGTGGACGGCCAACCCGTCCTGGTTGCCAACGGAATCGTCGTCGAACAGGTTCTCCG GCTGAAGCTCGTCGATCTGTCCGTCGGCAATCTGGATTTCAACGGAACCATCGATATCGCCGGAGACGTGGTTGCGGGAA TGACCGTCAAAGCCAGCGGTGACATCATCATTGGCGGAGTGGTTGAGGCATCCAGAATTGAAGCTGGTGGGAATATTGAG GTCCGTGGCGGTGTCATCGGCCAGGGGGATACCCGCTCCTCGGCTGCGGAAGCGGGGAGGGACACGGTGCGGATAAGGGC CGGTGGGTGCGTCTCTGCCCAGTTTGTCGAGAATGCCTTCGTTGAGGCGGGCGACAGCATCCAGGTGCAGGAGTTCTGCA TGCAGAGCGAACTGGTGGCGGGCAACCAGATTGTCGTAGGGCATGACGGCGGAAGCAAGGGGCACGTCATTGGTGGCAGC TGCCAAGCGATCAATCTGGTCCGGGCGGTAACCCTCGGTTCGCACGCCGGCGTGCATACCACCGTGAGCGTGGGGGTCGA CCCCCATGTTCGGGAACGTTTTTCCACTGTGCGCCTCAAGCTCCAGGAAAAAGAGCGGGAAATGGACGAGCTTGCGAAGA AGCTTGAGTACTACGTGTCGCTGCCGTCGGCCCAGCCGGAACAGGTTGCGCGCACCCGTGAGGCCAGGGACAAGCTTCAG TCGGTCATTTCGGAGCTCACGGGGGAAAAGAAGCGTCTCCAGAAGCGCCTGGAACAGGTGGCCAGCGCCCAGGTCGTTGT GGAACGAGAGGCCCTGGTCGGGGTCGTGATATCCATCGGCGCGAAGGTCTTCCAGGTTGACGAGGATCTGGGCGCAACGG TCTTCCGCATCGAAGAAGGAGCCATTGTCGCTTCTTCCTGA
Upstream 100 bases:
>100_bases TCTTGCTCTGAATATTCAAGAGTTTTTGTCTCAAGAATCGGCTTATTCTGTCGATATGTATACGTAAGAAGGTATCTATT ACCCCTCAAGGGGGTGTGCT
Downstream 100 bases:
>100_bases GGCAAGCGGTGCATTGCGGCTTCCGCCGTTCTCCCCCTGATTGCCGTTGACACCGGCAACCGACTGTGAAATGGTTCCTG ACCAGGGAGGTTTGGATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Two-Component Fusion Protein; Serine/Threonine Protein Kinase
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MAGEIEDAKVGLTFRLDGGGYKLSASFVPTDEKPPINLTWIKQALAAAGFADLYLYEHALVELLKRYNAASQPFTFDLGE RRNGSFTITCTPDNLEARLTIIPAYGGKAVAAEQVRQALKEKGIVFGVDEEAINRAIADGVASDLLVARGIPPQSGTDGE LVSFVPEIRDRQPQLLDDDRVDYRNLGQILSVRAGEPLMRRIPPVEGVAGTSITGKAISSPPARDVAFAPNLPGTAFDAD DPNLLVAAVDGQPVLVANGIVVEQVLRLKLVDLSVGNLDFNGTIDIAGDVVAGMTVKASGDIIIGGVVEASRIEAGGNIE VRGGVIGQGDTRSSAAEAGRDTVRIRAGGCVSAQFVENAFVEAGDSIQVQEFCMQSELVAGNQIVVGHDGGSKGHVIGGS CQAINLVRAVTLGSHAGVHTTVSVGVDPHVRERFSTVRLKLQEKEREMDELAKKLEYYVSLPSAQPEQVARTREARDKLQ SVISELTGEKKRLQKRLEQVASAQVVVEREALVGVVISIGAKVFQVDEDLGATVFRIEEGAIVASS
Sequences:
>Translated_546_residues MAGEIEDAKVGLTFRLDGGGYKLSASFVPTDEKPPINLTWIKQALAAAGFADLYLYEHALVELLKRYNAASQPFTFDLGE RRNGSFTITCTPDNLEARLTIIPAYGGKAVAAEQVRQALKEKGIVFGVDEEAINRAIADGVASDLLVARGIPPQSGTDGE LVSFVPEIRDRQPQLLDDDRVDYRNLGQILSVRAGEPLMRRIPPVEGVAGTSITGKAISSPPARDVAFAPNLPGTAFDAD DPNLLVAAVDGQPVLVANGIVVEQVLRLKLVDLSVGNLDFNGTIDIAGDVVAGMTVKASGDIIIGGVVEASRIEAGGNIE VRGGVIGQGDTRSSAAEAGRDTVRIRAGGCVSAQFVENAFVEAGDSIQVQEFCMQSELVAGNQIVVGHDGGSKGHVIGGS CQAINLVRAVTLGSHAGVHTTVSVGVDPHVRERFSTVRLKLQEKEREMDELAKKLEYYVSLPSAQPEQVARTREARDKLQ SVISELTGEKKRLQKRLEQVASAQVVVEREALVGVVISIGAKVFQVDEDLGATVFRIEEGAIVASS >Mature_545_residues AGEIEDAKVGLTFRLDGGGYKLSASFVPTDEKPPINLTWIKQALAAAGFADLYLYEHALVELLKRYNAASQPFTFDLGER RNGSFTITCTPDNLEARLTIIPAYGGKAVAAEQVRQALKEKGIVFGVDEEAINRAIADGVASDLLVARGIPPQSGTDGEL VSFVPEIRDRQPQLLDDDRVDYRNLGQILSVRAGEPLMRRIPPVEGVAGTSITGKAISSPPARDVAFAPNLPGTAFDADD PNLLVAAVDGQPVLVANGIVVEQVLRLKLVDLSVGNLDFNGTIDIAGDVVAGMTVKASGDIIIGGVVEASRIEAGGNIEV RGGVIGQGDTRSSAAEAGRDTVRIRAGGCVSAQFVENAFVEAGDSIQVQEFCMQSELVAGNQIVVGHDGGSKGHVIGGSC QAINLVRAVTLGSHAGVHTTVSVGVDPHVRERFSTVRLKLQEKEREMDELAKKLEYYVSLPSAQPEQVARTREARDKLQS VISELTGEKKRLQKRLEQVASAQVVVEREALVGVVISIGAKVFQVDEDLGATVFRIEEGAIVASS
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57947; Mature: 57816
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGEIEDAKVGLTFRLDGGGYKLSASFVPTDEKPPINLTWIKQALAAAGFADLYLYEHAL CCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH VELLKRYNAASQPFTFDLGERRNGSFTITCTPDNLEARLTIIPAYGGKAVAAEQVRQALK HHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHH EKGIVFGVDEEAINRAIADGVASDLLVARGIPPQSGTDGELVSFVPEIRDRQPQLLDDDR HCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC VDYRNLGQILSVRAGEPLMRRIPPVEGVAGTSITGKAISSPPARDVAFAPNLPGTAFDAD CCHHHHHHHHEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC DPNLLVAAVDGQPVLVANGIVVEQVLRLKLVDLSVGNLDFNGTIDIAGDVVAGMTVKASG CCCEEEEEECCCEEEEECCHHHHHHHHEEEEEEEECCCCCCCEEEECCCEEECEEEECCC DIIIGGVVEASRIEAGGNIEVRGGVIGQGDTRSSAAEAGRDTVRIRAGGCVSAQFVENAF CEEEEEEEEEEEECCCCCEEEECCEECCCCCCCHHHHCCCCEEEEEECCCEEHHHHHHHH VEAGDSIQVQEFCMQSELVAGNQIVVGHDGGSKGHVIGGSCQAINLVRAVTLGSHAGVHT HHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCHHHHHHHHEEECCCCCCEE TVSVGVDPHVRERFSTVRLKLQEKEREMDELAKKLEYYVSLPSAQPEQVARTREARDKLQ EEEECCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHH SVISELTGEKKRLQKRLEQVASAQVVVEREALVGVVISIGAKVFQVDEDLGATVFRIEEG HHHHHHCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCEEEEECCCCCCEEEEEECC AIVASS EEEECC >Mature Secondary Structure AGEIEDAKVGLTFRLDGGGYKLSASFVPTDEKPPINLTWIKQALAAAGFADLYLYEHAL CCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH VELLKRYNAASQPFTFDLGERRNGSFTITCTPDNLEARLTIIPAYGGKAVAAEQVRQALK HHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHH EKGIVFGVDEEAINRAIADGVASDLLVARGIPPQSGTDGELVSFVPEIRDRQPQLLDDDR HCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC VDYRNLGQILSVRAGEPLMRRIPPVEGVAGTSITGKAISSPPARDVAFAPNLPGTAFDAD CCHHHHHHHHEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC DPNLLVAAVDGQPVLVANGIVVEQVLRLKLVDLSVGNLDFNGTIDIAGDVVAGMTVKASG CCCEEEEEECCCEEEEECCHHHHHHHHEEEEEEEECCCCCCCEEEECCCEEECEEEECCC DIIIGGVVEASRIEAGGNIEVRGGVIGQGDTRSSAAEAGRDTVRIRAGGCVSAQFVENAF CEEEEEEEEEEEECCCCCEEEECCEECCCCCCCHHHHCCCCEEEEEECCCEEHHHHHHHH VEAGDSIQVQEFCMQSELVAGNQIVVGHDGGSKGHVIGGSCQAINLVRAVTLGSHAGVHT HHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCHHHHHHHHEEECCCCCCEE TVSVGVDPHVRERFSTVRLKLQEKEREMDELAKKLEYYVSLPSAQPEQVARTREARDKLQ EEEECCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHH SVISELTGEKKRLQKRLEQVASAQVVVEREALVGVVISIGAKVFQVDEDLGATVFRIEEG HHHHHHCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCEEEEECCCCCCEEEEEECC AIVASS EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA