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The map label for this gene is ubiX [C]

Identifier: 39995548

GI number: 39995548

Start: 472077

End: 472700

Strand: Direct

Name: ubiX [C]

Synonym: GSU0440

Alternate gene names: 39995548

Gene position: 472077-472700 (Clockwise)

Preceding gene: 39995547

Following gene: 39995549

Centisome position: 12.38

GC content: 65.71

Gene sequence:

>624_bases
ATGAGCGGGCGGCACGTGGTCTTGGCCATCACCGGCGCATCCGGGGCAGTGTACGGGCTTCGCCTGGGTTGTGAGCTTCT
GGCGGCGGGCTGTCGGCTCACTCTTCTGATCAGCCGGCCGGGTTTTACCGTCATTCGGGAAGAGTGCGGCCTCGATTGGG
GGGATTGGCCCCATGAGACCCTGGGCGCCCTGGAGGAGTACTTTCGGCCTGCGCCGGGGATGCTCGCCTACTATACGGAG
GACGATCTCATGGCTCCGGTGGCGAGTGGTTCCCGTGCGCCTGACGCCATGGTCGTCTGTCCCTGCTCCATGGGGAGCCT
GGCCCGGATCGCGGCGGGCCTTTCAAGCACCCTGACCGAGCGGTGTGCCGACGTGACCCTCAAGGAGGGGAGACCCCTGG
TGCTGGTGCCGCGGGAGACCCCCTTGTCGGCCATCCACCTGGAAAATATGCTGAAGCTGGCGCGGCTCGGGGTTCGGATC
GTGCCGGCCATGCCCGGTTTCTACCACGAACCGCGCACCGTGGACGACCTGGTCGGTTTTGTGGTGGGCAAGGTGCTGGA
CGCACTTCAGATTCCCCATGAGTTGTTCACCCGCTGGGGTGACGTATCCCGGGTGGAGGAGTGA

Upstream 100 bases:

>100_bases
TGACCAAGCTCGACGCAGCCTTTTTCACCATGAACGGCTACATCAGCATCACGCTGTTCGTGGCAACCCTGGCCGATGTG
CTGGCGGGACGGGGGGGCGT

Downstream 100 bases:

>100_bases
TGGGATGAGTATTTCATTGGCGACAATTAGCGGCCGGGTCCATGCCGGCGAACGGATCAGCGACGAGGAGGCCCTGTTCC
TCTTCGAGAGCCGCGACCCC

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSGRHVVLAITGASGAVYGLRLGCELLAAGCRLTLLISRPGFTVIREECGLDWGDWPHETLGALEEYFRPAPGMLAYYTE
DDLMAPVASGSRAPDAMVVCPCSMGSLARIAAGLSSTLTERCADVTLKEGRPLVLVPRETPLSAIHLENMLKLARLGVRI
VPAMPGFYHEPRTVDDLVGFVVGKVLDALQIPHELFTRWGDVSRVEE

Sequences:

>Translated_207_residues
MSGRHVVLAITGASGAVYGLRLGCELLAAGCRLTLLISRPGFTVIREECGLDWGDWPHETLGALEEYFRPAPGMLAYYTE
DDLMAPVASGSRAPDAMVVCPCSMGSLARIAAGLSSTLTERCADVTLKEGRPLVLVPRETPLSAIHLENMLKLARLGVRI
VPAMPGFYHEPRTVDDLVGFVVGKVLDALQIPHELFTRWGDVSRVEE
>Mature_206_residues
SGRHVVLAITGASGAVYGLRLGCELLAAGCRLTLLISRPGFTVIREECGLDWGDWPHETLGALEEYFRPAPGMLAYYTED
DLMAPVASGSRAPDAMVVCPCSMGSLARIAAGLSSTLTERCADVTLKEGRPLVLVPRETPLSAIHLENMLKLARLGVRIV
PAMPGFYHEPRTVDDLVGFVVGKVLDALQIPHELFTRWGDVSRVEE

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=204, Percent_Identity=36.2745098039216, Blast_Score=119, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6320746, Length=196, Percent_Identity=41.8367346938776, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22401; Mature: 22270

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRHVVLAITGASGAVYGLRLGCELLAAGCRLTLLISRPGFTVIREECGLDWGDWPHET
CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEHHHHHCCCCCCCCHHH
LGALEEYFRPAPGMLAYYTEDDLMAPVASGSRAPDAMVVCPCSMGSLARIAAGLSSTLTE
HHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
RCADVTLKEGRPLVLVPRETPLSAIHLENMLKLARLGVRIVPAMPGFYHEPRTVDDLVGF
HHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHH
VVGKVLDALQIPHELFTRWGDVSRVEE
HHHHHHHHHHCCHHHHHHCCCHHHCCC
>Mature Secondary Structure 
SGRHVVLAITGASGAVYGLRLGCELLAAGCRLTLLISRPGFTVIREECGLDWGDWPHET
CCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEHHHHHCCCCCCCCHHH
LGALEEYFRPAPGMLAYYTEDDLMAPVASGSRAPDAMVVCPCSMGSLARIAAGLSSTLTE
HHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
RCADVTLKEGRPLVLVPRETPLSAIHLENMLKLARLGVRIVPAMPGFYHEPRTVDDLVGF
HHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHH
VVGKVLDALQIPHELFTRWGDVSRVEE
HHHHHHHHHHCCHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]