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The map label for this gene is 39995537

Identifier: 39995537

GI number: 39995537

Start: 457774

End: 459165

Strand: Direct

Name: 39995537

Synonym: GSU0429

Alternate gene names: NA

Gene position: 457774-459165 (Clockwise)

Preceding gene: 39995536

Following gene: 39995538

Centisome position: 12.0

GC content: 68.18

Gene sequence:

>1392_bases
ATGAACGCCCATCCCCCCCTTTACTGGCACCAGGGGCTCTTTCTCCAGCCCCATCACTTTCAGCTCCAGGACCTGTCGGT
CCAGGGGCGTCTCGCCCCCCTGTTCCGCCATCTCCACCCCCACTTCTGGGGGGCGGGTGAGCTGGAGATCGAGGCCAGCG
CTCTCGGCACCCGGGTCTTCAGCATCCTTTCCGGCGAGTTCCTTTTCCCCGACGGCACCTGGGCGGTCATCGGCGAGAAC
GCCCTCTGCGAGCCGCGCTCCTTCGACGACTCCTGGATCGAAGGGGATCGTCCCCTGCCGGTCTACGTGGGAGTGCGCAA
GTGGAGCGGGGATAGAGAGAACGTGACCGTCACCGAACGGCTCGAAAACCTCGGCGGGATCACCACCCGCTTCGCCGCCG
CGGCAGATCCGGAGGAGATGCGCGATCTCCACGCCGGCGGCCCGGCAGGTCAGGTGAAGCGGCTGCGCCATGTGCTGAAA
ATCCTCTGGGACAGCGAGCGGGACCAACTGGGCGACTGGCACCTGATCCCGGTGGCGCGGCTGGAGCGCTTCGGGGCCGA
CGTGCGGCTCTCCGGCCGCTTCATCCCCCCTTGCCTCTCCCTCGAAGCGAGCGAGCCCCTCTTTCGCATCGTCCGGGAGA
TCCGGGACCAGGTGGCGGCCCGCGCCAGACAGCTGGAGGAGCACAAGAAGCAGCGCGGCATCCAGAACGCCGGGTTCGGC
TCTCGGGACATGGTCTACCTCCTGGCGCTCCGTTCTCTCAACCGGCATGTGCCTCTCCTCTTCCACCTGACCGAGGCGCG
GCAGGTCCACCCGTGGGACGTCTACGGGGCCCTGCGCCAGCTCATCGGCGAACTCTCCTCCTTCTCCGAGCGGGTCTCGG
CCCTTGGCAAACTGGACGACGGCGTCCGGCTTCTCCCTCCCTATGATCACCGGGCACTCGGGGAGCGCTTTTTCGTGGCC
CGTGACCTCATCGCCCGACTTCTGGACGAGATCACCGCCGGTCCCGATTACGTGATCCGCCTCACCCACGACGGCACCTT
CTTCAGCGCCGACCTGAAGCCGGGCATCTTTGAAACCGGCAGCCGCTATTACCTGGCCCTGCGGACCACCACGGAGCCGG
CTGCGTTCCTCCCGTCCCTTGAAGCCGCCGCCAAGCTCAGCGCCCGGAACCACCTGCCGGTCCTGGCCGCCCGCGCCCTC
CCCGGCATCGGCCTGAGCCACCTGCCGGTCCCGCCCCAGGAGCTGCCGCGCCGCGCCGACACCCACTACTTCGCCGTTGA
TACTGCCGGTGACCAATGGCCCCTGGTGGAGCGGGAACACGCCCTTGCCCTCCACTGGACCGGCGCCCCGGCCGATCTGG
AGGTGGAGCTGATGGTGGTGGCCAAGGGGTAG

Upstream 100 bases:

>100_bases
TCGTCAGCCGCACGAAGCTCGTCAAGCCGGGACGGGTCGATATTCGGCTGCATCTGGGCCCTCAGGAGATTCAGGATGTG
AAGGAGGAGCCCCGAAAGCC

Downstream 100 bases:

>100_bases
CTCATGCGCGAAGAACGCCTTCTGGAACGTATCCGCTCCCTGGAGCGGGATCCGTCGCGCCGCGGGGGGACTGATCGGGG
CCGTCTGGTGGATTCAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Protein ImpJ/VasE; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNAHPPLYWHQGLFLQPHHFQLQDLSVQGRLAPLFRHLHPHFWGAGELEIEASALGTRVFSILSGEFLFPDGTWAVIGEN
ALCEPRSFDDSWIEGDRPLPVYVGVRKWSGDRENVTVTERLENLGGITTRFAAAADPEEMRDLHAGGPAGQVKRLRHVLK
ILWDSERDQLGDWHLIPVARLERFGADVRLSGRFIPPCLSLEASEPLFRIVREIRDQVAARARQLEEHKKQRGIQNAGFG
SRDMVYLLALRSLNRHVPLLFHLTEARQVHPWDVYGALRQLIGELSSFSERVSALGKLDDGVRLLPPYDHRALGERFFVA
RDLIARLLDEITAGPDYVIRLTHDGTFFSADLKPGIFETGSRYYLALRTTTEPAAFLPSLEAAAKLSARNHLPVLAARAL
PGIGLSHLPVPPQELPRRADTHYFAVDTAGDQWPLVEREHALALHWTGAPADLEVELMVVAKG

Sequences:

>Translated_463_residues
MNAHPPLYWHQGLFLQPHHFQLQDLSVQGRLAPLFRHLHPHFWGAGELEIEASALGTRVFSILSGEFLFPDGTWAVIGEN
ALCEPRSFDDSWIEGDRPLPVYVGVRKWSGDRENVTVTERLENLGGITTRFAAAADPEEMRDLHAGGPAGQVKRLRHVLK
ILWDSERDQLGDWHLIPVARLERFGADVRLSGRFIPPCLSLEASEPLFRIVREIRDQVAARARQLEEHKKQRGIQNAGFG
SRDMVYLLALRSLNRHVPLLFHLTEARQVHPWDVYGALRQLIGELSSFSERVSALGKLDDGVRLLPPYDHRALGERFFVA
RDLIARLLDEITAGPDYVIRLTHDGTFFSADLKPGIFETGSRYYLALRTTTEPAAFLPSLEAAAKLSARNHLPVLAARAL
PGIGLSHLPVPPQELPRRADTHYFAVDTAGDQWPLVEREHALALHWTGAPADLEVELMVVAKG
>Mature_463_residues
MNAHPPLYWHQGLFLQPHHFQLQDLSVQGRLAPLFRHLHPHFWGAGELEIEASALGTRVFSILSGEFLFPDGTWAVIGEN
ALCEPRSFDDSWIEGDRPLPVYVGVRKWSGDRENVTVTERLENLGGITTRFAAAADPEEMRDLHAGGPAGQVKRLRHVLK
ILWDSERDQLGDWHLIPVARLERFGADVRLSGRFIPPCLSLEASEPLFRIVREIRDQVAARARQLEEHKKQRGIQNAGFG
SRDMVYLLALRSLNRHVPLLFHLTEARQVHPWDVYGALRQLIGELSSFSERVSALGKLDDGVRLLPPYDHRALGERFFVA
RDLIARLLDEITAGPDYVIRLTHDGTFFSADLKPGIFETGSRYYLALRTTTEPAAFLPSLEAAAKLSARNHLPVLAARAL
PGIGLSHLPVPPQELPRRADTHYFAVDTAGDQWPLVEREHALALHWTGAPADLEVELMVVAKG

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51952; Mature: 51952

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAHPPLYWHQGLFLQPHHFQLQDLSVQGRLAPLFRHLHPHFWGAGELEIEASALGTRVF
CCCCCCCEECCCEEECCCCCEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHH
SILSGEFLFPDGTWAVIGENALCEPRSFDDSWIEGDRPLPVYVGVRKWSGDRENVTVTER
HHHCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEHHHH
LENLGGITTRFAAAADPEEMRDLHAGGPAGQVKRLRHVLKILWDSERDQLGDWHLIPVAR
HHHCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCEEEEHHHH
LERFGADVRLSGRFIPPCLSLEASEPLFRIVREIRDQVAARARQLEEHKKQRGIQNAGFG
HHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SRDMVYLLALRSLNRHVPLLFHLTEARQVHPWDVYGALRQLIGELSSFSERVSALGKLDD
CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVRLLPPYDHRALGERFFVARDLIARLLDEITAGPDYVIRLTHDGTFFSADLKPGIFETG
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCC
SRYYLALRTTTEPAAFLPSLEAAAKLSARNHLPVLAARALPGIGLSHLPVPPQELPRRAD
CEEEEEEEECCCCHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCC
THYFAVDTAGDQWPLVEREHALALHWTGAPADLEVELMVVAKG
CEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECC
>Mature Secondary Structure
MNAHPPLYWHQGLFLQPHHFQLQDLSVQGRLAPLFRHLHPHFWGAGELEIEASALGTRVF
CCCCCCCEECCCEEECCCCCEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHH
SILSGEFLFPDGTWAVIGENALCEPRSFDDSWIEGDRPLPVYVGVRKWSGDRENVTVTER
HHHCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEHHHH
LENLGGITTRFAAAADPEEMRDLHAGGPAGQVKRLRHVLKILWDSERDQLGDWHLIPVAR
HHHCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCEEEEHHHH
LERFGADVRLSGRFIPPCLSLEASEPLFRIVREIRDQVAARARQLEEHKKQRGIQNAGFG
HHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SRDMVYLLALRSLNRHVPLLFHLTEARQVHPWDVYGALRQLIGELSSFSERVSALGKLDD
CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVRLLPPYDHRALGERFFVARDLIARLLDEITAGPDYVIRLTHDGTFFSADLKPGIFETG
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCC
SRYYLALRTTTEPAAFLPSLEAAAKLSARNHLPVLAARALPGIGLSHLPVPPQELPRRAD
CEEEEEEEECCCCHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCC
THYFAVDTAGDQWPLVEREHALALHWTGAPADLEVELMVVAKG
CEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA