| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is flgB [C]
Identifier: 39995515
GI number: 39995515
Start: 439493
End: 439912
Strand: Direct
Name: flgB [C]
Synonym: GSU0407
Alternate gene names: 39995515
Gene position: 439493-439912 (Clockwise)
Preceding gene: 39995514
Following gene: 39995516
Centisome position: 11.52
GC content: 58.81
Gene sequence:
>420_bases ATGCCTGTCGACTCTATGTTCGGAACGACCATAAACGTCCTGGCCAAGGCGGTTGACCTGAGGGCCAGGAACCATACCAT GATCTCTGCCAACCTGGCCAATGCCGAGACCCCAAACTACACGCCCAAGGCCCTTTCCTTCGAGAAGGAACTGGGCGCTG CCCTCAAGGGCAACAAAACGGGGAGTCCCGCGACGACTCATCCCCGACACATTCCCCTGAAGGGGCAGGCCGCCTCCGTT CAGAGCGTCGAGGGAACGGTCATCGAGACTCCGGCCCCGACACCCGGTCGGGACAACAACGGGGTGGAGCTTGAGGCCGA GATGAGTCGCATGGCCGAGAACCAGATCATGTACAATGCCTCGATCCAGATCCTGACCAAGAAGTTCGAAGGCATGAAAT ACGCCATCAAAGGACAGTAG
Upstream 100 bases:
>100_bases GAACGTGCCGTTTGTCCCTGATTACGGGATGGTAGGCGGTCTGGAAAAGCTGGTACGGCTTTTGCTCTATCCGCAATGCG GGAGACAAAGGAGGAACGAG
Downstream 100 bases:
>100_bases CCATGGACTTTTTCAGCGCAATGCAGGTCAGTTCTTCCGCCCTTTCCGCCGAACGGACCAGGATGAACCTCATCTCCGCT AACCTGGCCAACGCCAACTC
Product: flagellar basal-body rod protein FlgB
Products: NA
Alternate protein names: Flagellar Basal Body Rod Protein FlgB; Flagellar Basal-Body Rod Protein; Flagellar Basal Body Protein; Flagellar Basal-Body Rod Protein Flgb; Flagellar Proximal Rod Protein FlgB
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MPVDSMFGTTINVLAKAVDLRARNHTMISANLANAETPNYTPKALSFEKELGAALKGNKTGSPATTHPRHIPLKGQAASV QSVEGTVIETPAPTPGRDNNGVELEAEMSRMAENQIMYNASIQILTKKFEGMKYAIKGQ
Sequences:
>Translated_139_residues MPVDSMFGTTINVLAKAVDLRARNHTMISANLANAETPNYTPKALSFEKELGAALKGNKTGSPATTHPRHIPLKGQAASV QSVEGTVIETPAPTPGRDNNGVELEAEMSRMAENQIMYNASIQILTKKFEGMKYAIKGQ >Mature_138_residues PVDSMFGTTINVLAKAVDLRARNHTMISANLANAETPNYTPKALSFEKELGAALKGNKTGSPATTHPRHIPLKGQAASVQ SVEGTVIETPAPTPGRDNNGVELEAEMSRMAENQIMYNASIQILTKKFEGMKYAIKGQ
Specific function: Unknown
COG id: COG1815
COG function: function code N; Flagellar basal body protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14940; Mature: 14809
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVDSMFGTTINVLAKAVDLRARNHTMISANLANAETPNYTPKALSFEKELGAALKGNKT CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCHHHCCCCC GSPATTHPRHIPLKGQAASVQSVEGTVIETPAPTPGRDNNGVELEAEMSRMAENQIMYNA CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHCEEECC SIQILTKKFEGMKYAIKGQ CEEEEEECCCCEEEEEECC >Mature Secondary Structure PVDSMFGTTINVLAKAVDLRARNHTMISANLANAETPNYTPKALSFEKELGAALKGNKT CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCHHHCCCCC GSPATTHPRHIPLKGQAASVQSVEGTVIETPAPTPGRDNNGVELEAEMSRMAENQIMYNA CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHCEEECC SIQILTKKFEGMKYAIKGQ CEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA