Click here to switch to the map view.

The map label for this gene is 39995514

Identifier: 39995514

GI number: 39995514

Start: 437013

End: 439259

Strand: Direct

Name: 39995514

Synonym: GSU0406

Alternate gene names: NA

Gene position: 437013-439259 (Clockwise)

Preceding gene: 39995513

Following gene: 39995515

Centisome position: 11.46

GC content: 63.64

Gene sequence:

>2247_bases
TTGACGCTTGCCCCCCCGCTGCCCCATTCGAATTCCCCTTGTTCGCCCTGTTGCATGGATCCACTGTTACGGCACGGCTT
TTGCCTTGATATGTCCGGGGAAATCTATCCCGTCATCCGGCTCCCCTGTTCCGGGGCCGCAAAAGGTGTCCATGTCATGA
TTCGTTTCATCGTCAAGCTGCTGCTCTGTGCACTGGTCCTGCTGCCGCTGCCCGCGTTTGCCACGTCCGGCGCCGATACC
GGCCCGGACAACCGTCTGCTGCGTATGGGGGTGCGCGCCCACGGGGGATTTACCCGGCTTTCCATGGCGTTCGAGCGCGA
CATTGCCCCTGTCCTGCACCAGCTCTCGGGCAACAGGGTTCGGCTGGTTTTCAGCAACACGGTCGGCGGCCGCTGGAAGA
AGCTGCGGAGCTACCGCGACGCGCATGTGGAGGGGGTAGTCGTGGCGCCGCGCGGTAATGACCTTATGGTAACGGTAACG
ATCAAGGGGGACCCTCGGGGCGTACGCGTCTCAACTTCGCCCGGCGCTGGCGTTGTTTCTCTCGATGTGGGAGCGTCGCT
CGCCCCCCGCCGCTCGCCTCCTCTTGCCCAGGGGCGTGAGGGGATCAAGGTCGGGGTCGAGCAGCTCATCACCACGTTCG
ATCCGCCGTTTAAGTCTGAGATCCCCTTTACCCCCACTGACCGGCGGGTGCTCGAAGCAATGGTCCCTCCCGCCGAGGCC
GCTCTGATCATGGACGGCGAGGCTGCCCTCTATGAAGGCAACGGCAGCGAGGCCGCCGAGATCTTCGCCGGGATAGGCAC
CAACTCTCCCGGCCGCCCCCTGGCCCTTTACCGGCTGGGGGAGGCCAACTACCTTCTCCAGAAGTACGGGGATGCTCTTC
GCTTTTTCCGCGAGGCGGAGCGCCAGTGGCCCGTCTTCCTCACCCGGTCGCCGTCCACGGCCTTCTGCTATGCCGACAGC
GTGGCCCGTAGCGGGGATCTGGCGGGCGGTCGCCGGCTGCTCGGATCGCTCATCGCCGGCTTGGCCGATAAAAAGTACGC
GCCTGCGCTCCTGGTGCGCATGGCCGATATCCTGGCGCGACAGGGGAAGGACCAAGAGGCGCTGGCCATCTACCGCAACG
TTGCCGACAATTTTACCGGCAGCAAAGGGAGCTGGCAGGCCCGGATGAAGCTCGCCGACCGCCGGCTGCTTGCCTTGGAG
CCCGCAGCTTACAGTTCGCTGGTGAAGGATTACCTGGAGATCTATGAGCGGGGTACGGATTTCGGCCTGCGCGAGCAGGG
ATTATTCAAGGCGGCTCTGCTGCTCTCCCTGTATGGTGATGCCGATCAGGCCTTTGCCCGGGTGGCTGAATACGAGAAAA
AATTTCCGCGCGGGATGTATGTCAGCATTGCCAAGGGGATGCGTGAGGAACTCCTGGTGCCGGTCTACCGCCGGATCACC
CGCGCCGGTGACAACGAAGCCCTTGTGAAGCTCGCCCTGGAGAACCGGGACTATCTCGGCCGCGTCCTGGCCGAGGACGA
CTTCATCAAAAACCTGTCCGCCGCTTTCGCCGATCTGGGAAGGATCAAGGAGGAGGTCGGCCTGTACGCGAATCTCGCCA
TCCGCGAGCAAAACCGGGTGTACGCCCCCGAGCTCTATCGCAGGATTCTCCACGATGCCGAGCAGCTGGGAGACCCGACC
CTCATGGAGAAGGCCGCGGGTGAATTTGTGGAGCGGTTCCCGGCCCATCCCTGGGTACAGCGGTTCCGTGAGGAGCTTGC
TGCGGTCGAGTATAACCGGGGAGACTTCCAGCGGGTGGTGGGCCGGCTGTCGGGGATGCTGGCGTCGGGAACACGGCCCG
AGTATGCCGAGAGCCTGTACTATCTGGGCAAGTCTCTGGACGCCTCCGGCAACCGGCGCGATGCCGAGCGGGCCATGCTC
CTCTTTCTGGCCGAGCTCCGGCGCCGCGAAATGTCTTCGCCGCTGGCCGCCGATGCAAGCTACGTGGCTGCAACCGCTCG
ACTGTCGCGGGGTGACCGTAAGGGAGCCAAGGAAATACTGCGGGCCGCCGGTGAGGCTTCTCCCGAAGAGCGGGATCCAT
TCCTCTACAAACTGGGCGAGATCGCCCGCTCCGAAGGGCGTTACGAGGAGGCTGCCCACTATCTCAGGACAGTGGTCAAG
GAGGGAAAAGACCCTGATTGGCGGGATATGGCATCGCGCCTCCTTGCCGATATGGAGTTGACGGGAATGGTCCGCAAGTC
AAAATGA

Upstream 100 bases:

>100_bases
ACCAGTCCGACGAGGTGGTGGCCAAGGTGGCAAAGTTTCTGAAAGCCGCCTGACGTACTTCTTGTTTGTGTCAAAATTGT
GACCCGTTGTCACCCTCCCT

Downstream 100 bases:

>100_bases
TGACCTGGATTTCAGGGGGGCCGGATAAGAAAGAGGGAACACGGACGTGCTCCCTCTTTCTTTGGGCATGAAGATGAGAG
AATGACGCCGGTCTGACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; Tetratricopeptide Domain Protein; Lipoprotein

Number of amino acids: Translated: 748; Mature: 747

Protein sequence:

>748_residues
MTLAPPLPHSNSPCSPCCMDPLLRHGFCLDMSGEIYPVIRLPCSGAAKGVHVMIRFIVKLLLCALVLLPLPAFATSGADT
GPDNRLLRMGVRAHGGFTRLSMAFERDIAPVLHQLSGNRVRLVFSNTVGGRWKKLRSYRDAHVEGVVVAPRGNDLMVTVT
IKGDPRGVRVSTSPGAGVVSLDVGASLAPRRSPPLAQGREGIKVGVEQLITTFDPPFKSEIPFTPTDRRVLEAMVPPAEA
ALIMDGEAALYEGNGSEAAEIFAGIGTNSPGRPLALYRLGEANYLLQKYGDALRFFREAERQWPVFLTRSPSTAFCYADS
VARSGDLAGGRRLLGSLIAGLADKKYAPALLVRMADILARQGKDQEALAIYRNVADNFTGSKGSWQARMKLADRRLLALE
PAAYSSLVKDYLEIYERGTDFGLREQGLFKAALLLSLYGDADQAFARVAEYEKKFPRGMYVSIAKGMREELLVPVYRRIT
RAGDNEALVKLALENRDYLGRVLAEDDFIKNLSAAFADLGRIKEEVGLYANLAIREQNRVYAPELYRRILHDAEQLGDPT
LMEKAAGEFVERFPAHPWVQRFREELAAVEYNRGDFQRVVGRLSGMLASGTRPEYAESLYYLGKSLDASGNRRDAERAML
LFLAELRRREMSSPLAADASYVAATARLSRGDRKGAKEILRAAGEASPEERDPFLYKLGEIARSEGRYEEAAHYLRTVVK
EGKDPDWRDMASRLLADMELTGMVRKSK

Sequences:

>Translated_748_residues
MTLAPPLPHSNSPCSPCCMDPLLRHGFCLDMSGEIYPVIRLPCSGAAKGVHVMIRFIVKLLLCALVLLPLPAFATSGADT
GPDNRLLRMGVRAHGGFTRLSMAFERDIAPVLHQLSGNRVRLVFSNTVGGRWKKLRSYRDAHVEGVVVAPRGNDLMVTVT
IKGDPRGVRVSTSPGAGVVSLDVGASLAPRRSPPLAQGREGIKVGVEQLITTFDPPFKSEIPFTPTDRRVLEAMVPPAEA
ALIMDGEAALYEGNGSEAAEIFAGIGTNSPGRPLALYRLGEANYLLQKYGDALRFFREAERQWPVFLTRSPSTAFCYADS
VARSGDLAGGRRLLGSLIAGLADKKYAPALLVRMADILARQGKDQEALAIYRNVADNFTGSKGSWQARMKLADRRLLALE
PAAYSSLVKDYLEIYERGTDFGLREQGLFKAALLLSLYGDADQAFARVAEYEKKFPRGMYVSIAKGMREELLVPVYRRIT
RAGDNEALVKLALENRDYLGRVLAEDDFIKNLSAAFADLGRIKEEVGLYANLAIREQNRVYAPELYRRILHDAEQLGDPT
LMEKAAGEFVERFPAHPWVQRFREELAAVEYNRGDFQRVVGRLSGMLASGTRPEYAESLYYLGKSLDASGNRRDAERAML
LFLAELRRREMSSPLAADASYVAATARLSRGDRKGAKEILRAAGEASPEERDPFLYKLGEIARSEGRYEEAAHYLRTVVK
EGKDPDWRDMASRLLADMELTGMVRKSK
>Mature_747_residues
TLAPPLPHSNSPCSPCCMDPLLRHGFCLDMSGEIYPVIRLPCSGAAKGVHVMIRFIVKLLLCALVLLPLPAFATSGADTG
PDNRLLRMGVRAHGGFTRLSMAFERDIAPVLHQLSGNRVRLVFSNTVGGRWKKLRSYRDAHVEGVVVAPRGNDLMVTVTI
KGDPRGVRVSTSPGAGVVSLDVGASLAPRRSPPLAQGREGIKVGVEQLITTFDPPFKSEIPFTPTDRRVLEAMVPPAEAA
LIMDGEAALYEGNGSEAAEIFAGIGTNSPGRPLALYRLGEANYLLQKYGDALRFFREAERQWPVFLTRSPSTAFCYADSV
ARSGDLAGGRRLLGSLIAGLADKKYAPALLVRMADILARQGKDQEALAIYRNVADNFTGSKGSWQARMKLADRRLLALEP
AAYSSLVKDYLEIYERGTDFGLREQGLFKAALLLSLYGDADQAFARVAEYEKKFPRGMYVSIAKGMREELLVPVYRRITR
AGDNEALVKLALENRDYLGRVLAEDDFIKNLSAAFADLGRIKEEVGLYANLAIREQNRVYAPELYRRILHDAEQLGDPTL
MEKAAGEFVERFPAHPWVQRFREELAAVEYNRGDFQRVVGRLSGMLASGTRPEYAESLYYLGKSLDASGNRRDAERAMLL
FLAELRRREMSSPLAADASYVAATARLSRGDRKGAKEILRAAGEASPEERDPFLYKLGEIARSEGRYEEAAHYLRTVVKE
GKDPDWRDMASRLLADMELTGMVRKSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82601; Mature: 82470

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAPPLPHSNSPCSPCCMDPLLRHGFCLDMSGEIYPVIRLPCSGAAKGVHVMIRFIVKL
CCCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
LLCALVLLPLPAFATSGADTGPDNRLLRMGVRAHGGFTRLSMAFERDIAPVLHQLSGNRV
HHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEE
RLVFSNTVGGRWKKLRSYRDAHVEGVVVAPRGNDLMVTVTIKGDPRGVRVSTSPGAGVVS
EEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCEEEECCCCCCEEE
LDVGASLAPRRSPPLAQGREGIKVGVEQLITTFDPPFKSEIPFTPTDRRVLEAMVPPAEA
ECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCE
ALIMDGEAALYEGNGSEAAEIFAGIGTNSPGRPLALYRLGEANYLLQKYGDALRFFREAE
EEEECCCEEEEECCCCHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
RQWPVFLTRSPSTAFCYADSVARSGDLAGGRRLLGSLIAGLADKKYAPALLVRMADILAR
CCCCEEEECCCCCEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QGKDQEALAIYRNVADNFTGSKGSWQARMKLADRRLLALEPAAYSSLVKDYLEIYERGTD
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHCCCC
FGLREQGLFKAALLLSLYGDADQAFARVAEYEKKFPRGMYVSIAKGMREELLVPVYRRIT
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHH
RAGDNEALVKLALENRDYLGRVLAEDDFIKNLSAAFADLGRIKEEVGLYANLAIREQNRV
HCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
YAPELYRRILHDAEQLGDPTLMEKAAGEFVERFPAHPWVQRFREELAAVEYNRGDFQRVV
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH
GRLSGMLASGTRPEYAESLYYLGKSLDASGNRRDAERAMLLFLAELRRREMSSPLAADAS
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
YVAATARLSRGDRKGAKEILRAAGEASPEERDPFLYKLGEIARSEGRYEEAAHYLRTVVK
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
EGKDPDWRDMASRLLADMELTGMVRKSK
CCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLAPPLPHSNSPCSPCCMDPLLRHGFCLDMSGEIYPVIRLPCSGAAKGVHVMIRFIVKL
CCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
LLCALVLLPLPAFATSGADTGPDNRLLRMGVRAHGGFTRLSMAFERDIAPVLHQLSGNRV
HHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEE
RLVFSNTVGGRWKKLRSYRDAHVEGVVVAPRGNDLMVTVTIKGDPRGVRVSTSPGAGVVS
EEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCEEEECCCCCCEEE
LDVGASLAPRRSPPLAQGREGIKVGVEQLITTFDPPFKSEIPFTPTDRRVLEAMVPPAEA
ECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCE
ALIMDGEAALYEGNGSEAAEIFAGIGTNSPGRPLALYRLGEANYLLQKYGDALRFFREAE
EEEECCCEEEEECCCCHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
RQWPVFLTRSPSTAFCYADSVARSGDLAGGRRLLGSLIAGLADKKYAPALLVRMADILAR
CCCCEEEECCCCCEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QGKDQEALAIYRNVADNFTGSKGSWQARMKLADRRLLALEPAAYSSLVKDYLEIYERGTD
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHCCCC
FGLREQGLFKAALLLSLYGDADQAFARVAEYEKKFPRGMYVSIAKGMREELLVPVYRRIT
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHH
RAGDNEALVKLALENRDYLGRVLAEDDFIKNLSAAFADLGRIKEEVGLYANLAIREQNRV
HCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
YAPELYRRILHDAEQLGDPTLMEKAAGEFVERFPAHPWVQRFREELAAVEYNRGDFQRVV
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH
GRLSGMLASGTRPEYAESLYYLGKSLDASGNRRDAERAMLLFLAELRRREMSSPLAADAS
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
YVAATARLSRGDRKGAKEILRAAGEASPEERDPFLYKLGEIARSEGRYEEAAHYLRTVVK
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
EGKDPDWRDMASRLLADMELTGMVRKSK
CCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA