Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is pspE [C]

Identifier: 39995506

GI number: 39995506

Start: 429887

End: 430243

Strand: Direct

Name: pspE [C]

Synonym: GSU0398

Alternate gene names: 39995506

Gene position: 429887-430243 (Clockwise)

Preceding gene: 39995505

Following gene: 39995507

Centisome position: 11.27

GC content: 64.71

Gene sequence:

>357_bases
GTGTTCATGGTGACGTCGCTCGCCGCCACCGCCCTGGCTGCGCCCTACCGCAACATCGGTTCGGCCGAGGCCAAGGCGCT
GCTTGACAAGAAACGCAACGTCTTTCTCCTGGACGTGCGGACCCCTGACGAATACCGCCAGGCCCGCTTGGCCGGGTCGG
TGCTTATTCCAATCAACGAAGTGGAGCGCCGCATCGCACAGATCCCCAAGGGGAGGCCGGTGCTGGTATATTGCGCCGTG
GGCTCCCGCTCGGGGCTCGTGGCCGGCTACCTGACCCAGCGGGGATACGGCGAAGTCTACAACATGCACGACGGCATCGT
CGGCTGGTATCGCAACGGGTTTCCGATCACCCGGTGA

Upstream 100 bases:

>100_bases
ATGAATTCCCCGGCCGGTTTCACCCGTCCGCGGTGGGATACACCCTGGAAGTCTGAACGCAAGGAAAGGATCTTTCATGA
TCAGGAAGTTTATCATTGCC

Downstream 100 bases:

>100_bases
CAACATTCGTGAGGTGATGACCATGAGTGAAGAGCTAACACGAGACTACGAGATATCGGCCCAGCTGCTGCGCATCCTCG
GCCATCCGGTGCGGCTGCGG

Product: phage prohead protease

Products: NA

Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Domain Protein; Phage Shock Protein E; Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Metallo-Beta-Lactamase; Rhodanese Family Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Beta-Lactamase Domain-Containing Protein; Molybdopterin Biosynthesis Protein; SirA Family Protein; Molybdopterin Biosynthesis Protein MoeB; Phage Prohead Protease; Rhodanese Homology Domain Superfamily Protein; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Pyridine Nucleotide Oxidoreductase; Sulfurtransferase; Beta-Lactamase Domain Protein; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Family Protein; Molybdenum Cofactor Biosynthesis Protein; NADH Oxidase/Rhodanese-Related Sulfurtransferase; Methyl-Accepting Chemotaxis Sensory Transducer; Thioredoxin; Pyridine Nucleotide-Disulfide Oxidoreductase

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MFMVTSLAATALAAPYRNIGSAEAKALLDKKRNVFLLDVRTPDEYRQARLAGSVLIPINEVERRIAQIPKGRPVLVYCAV
GSRSGLVAGYLTQRGYGEVYNMHDGIVGWYRNGFPITR

Sequences:

>Translated_118_residues
MFMVTSLAATALAAPYRNIGSAEAKALLDKKRNVFLLDVRTPDEYRQARLAGSVLIPINEVERRIAQIPKGRPVLVYCAV
GSRSGLVAGYLTQRGYGEVYNMHDGIVGWYRNGFPITR
>Mature_118_residues
MFMVTSLAATALAAPYRNIGSAEAKALLDKKRNVFLLDVRTPDEYRQARLAGSVLIPINEVERRIAQIPKGRPVLVYCAV
GSRSGLVAGYLTQRGYGEVYNMHDGIVGWYRNGFPITR

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13072; Mature: 13072

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMVTSLAATALAAPYRNIGSAEAKALLDKKRNVFLLDVRTPDEYRQARLAGSVLIPINE
CEEEHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCEEEEEHHH
VERRIAQIPKGRPVLVYCAVGSRSGLVAGYLTQRGYGEVYNMHDGIVGWYRNGFPITR
HHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCCCCC
>Mature Secondary Structure
MFMVTSLAATALAAPYRNIGSAEAKALLDKKRNVFLLDVRTPDEYRQARLAGSVLIPINE
CEEEHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCEEEEEHHH
VERRIAQIPKGRPVLVYCAVGSRSGLVAGYLTQRGYGEVYNMHDGIVGWYRNGFPITR
HHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA