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The map label for this gene is 39995499

Identifier: 39995499

GI number: 39995499

Start: 422509

End: 423822

Strand: Direct

Name: 39995499

Synonym: GSU0391

Alternate gene names: NA

Gene position: 422509-423822 (Clockwise)

Preceding gene: 39995497

Following gene: 39995500

Centisome position: 11.08

GC content: 65.53

Gene sequence:

>1314_bases
ATGCTTGTTCTCAGTCCGCCGGTGCTGCTCGCCGCCGATCGGTCCGTCACGCTGCAGGAGGCCCTCCAGTCGGCTCTTGA
GCGCAATCATCTGGTGAACGGCGCCCGCTTTGAGCGTGAGGCGGCCGAACGGGGGGCCGCCGCCAGCCGCAGCCGCTACT
TCCCCCATATTTTCCTCGAAGAGGGTTTTGCCGCATCGGACGCGCCGGACCGGGTCTTCATGATGAAGCTCGACCAAGGG
CGATTCACCCTCGACGATTTCCAGCTCGAGAACCTGAACACTCCTTCGTCCTACCGGGACTTCCGGACCGCAGTTACCTT
GGAGCAGCCCCTGTTCGACCTGGGCATAGGCTATGGTCGGGAGATGGCCGAAAAAGAGGCGGAGCGGGCCGGTTTCTCCC
TTGCCCAGCGGAGGGAGGATGTGGGCTTGGCGGTCTACGCGGCATATCTCGATGTCCAGAAGGGGCGGGTGACCCTGGCC
GCGACGGAGAAGGAGGTGGCCGAGGCCCGGGAGAGCCTGCGGGTGGCCCAGGCCCGCAGCCGTGAGGGTACCGCGCTTCG
TTCCGACGAGTTGCGGGCGCGAACCTTTCTTTCCGAATCGGAACAGCGCACTATTACTGCCCTGAACGACCTGCGTCTGG
CCCGGATGCGGCTTGCCCTGGCCACGGGGGAGGATGCCGGCGGATCCCTTGACATCGCCGAAGAACTGATCAGTTCGCCG
GTGCGGCTCTCTGAGGATGAGCTGGTACGGGAGGCTCTGGTCAATCGCAGCGATCTGAAAGGGGGCGAAAAGGACGTGGA
GCGGGCCGAGGCGGCGGCGGGGGCTGCGCGTAGCGCCTGGTTCCCCACAGTCTATGCCGGGGCGTCGTACCAGATGAACA
ACCGGGATGTCCCCTTCGGCCGGGACAACGACGCCTGGATGGCCGGCGTGAACCTCCGGTGGGAACTGTTCGACGGCCTG
CGTCGCTCGCACGACCAGGCCAAAGCCGGTGCCGTCCGGCAGGCTGCGCTCCAGTACCTGGAGCAGCAGCGCAAGGAGGT
GGTGCTCAGGGTTCGCGAGGCCGCCTTGCGCCGCGAAGAGGCCGGCAAGAGACTTGAGGTGGCCCGCCATGCTCTGCTGG
CTGCCGACGAAGGGATGCGCATCGTGGCGAAGCGTTACGAAAACGGTCTTGCCACCATGGTGGAGCTGTTGGATGCGCAG
TCTGCCCTGAACAGGAGCAGGACCGGCCTCGTGGAGCGGGAGAGCGAGTATCTGTTGGCCACGGCCCGCGTGTACCACGC
GGCCGGACTATTTCTGAAGGAGACCGTGAAATGA

Upstream 100 bases:

>100_bases
TGACAATATACGGCATGACATATATATACAAAATTATATATTGCGTGGCTCTGCAGCCACGGGGAGGAATGTGGTGAGGT
CGCTTATCGTCGCCTTTTCG

Downstream 100 bases:

>100_bases
GGATGGGGAGAGGAGTGAGAGCGGCCTGTGGCGTCGTCCTCCTTGCTGCGGCCCTCACGGGCTGTGGCCATAAGGCGGAT
AAGGCGGAATCGAAGCAGCC

Product: Outer membrane efflux family protein

Products: NA

Alternate protein names: Outer Membrane Efflux Family Protein; Outer Membrane Macrolide Efflux Protein; LipD Protein; Outer Membrane Protein; RND Family Efflux Pump Outer Membrane Protein

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MLVLSPPVLLAADRSVTLQEALQSALERNHLVNGARFEREAAERGAAASRSRYFPHIFLEEGFAASDAPDRVFMMKLDQG
RFTLDDFQLENLNTPSSYRDFRTAVTLEQPLFDLGIGYGREMAEKEAERAGFSLAQRREDVGLAVYAAYLDVQKGRVTLA
ATEKEVAEARESLRVAQARSREGTALRSDELRARTFLSESEQRTITALNDLRLARMRLALATGEDAGGSLDIAEELISSP
VRLSEDELVREALVNRSDLKGGEKDVERAEAAAGAARSAWFPTVYAGASYQMNNRDVPFGRDNDAWMAGVNLRWELFDGL
RRSHDQAKAGAVRQAALQYLEQQRKEVVLRVREAALRREEAGKRLEVARHALLAADEGMRIVAKRYENGLATMVELLDAQ
SALNRSRTGLVERESEYLLATARVYHAAGLFLKETVK

Sequences:

>Translated_437_residues
MLVLSPPVLLAADRSVTLQEALQSALERNHLVNGARFEREAAERGAAASRSRYFPHIFLEEGFAASDAPDRVFMMKLDQG
RFTLDDFQLENLNTPSSYRDFRTAVTLEQPLFDLGIGYGREMAEKEAERAGFSLAQRREDVGLAVYAAYLDVQKGRVTLA
ATEKEVAEARESLRVAQARSREGTALRSDELRARTFLSESEQRTITALNDLRLARMRLALATGEDAGGSLDIAEELISSP
VRLSEDELVREALVNRSDLKGGEKDVERAEAAAGAARSAWFPTVYAGASYQMNNRDVPFGRDNDAWMAGVNLRWELFDGL
RRSHDQAKAGAVRQAALQYLEQQRKEVVLRVREAALRREEAGKRLEVARHALLAADEGMRIVAKRYENGLATMVELLDAQ
SALNRSRTGLVERESEYLLATARVYHAAGLFLKETVK
>Mature_437_residues
MLVLSPPVLLAADRSVTLQEALQSALERNHLVNGARFEREAAERGAAASRSRYFPHIFLEEGFAASDAPDRVFMMKLDQG
RFTLDDFQLENLNTPSSYRDFRTAVTLEQPLFDLGIGYGREMAEKEAERAGFSLAQRREDVGLAVYAAYLDVQKGRVTLA
ATEKEVAEARESLRVAQARSREGTALRSDELRARTFLSESEQRTITALNDLRLARMRLALATGEDAGGSLDIAEELISSP
VRLSEDELVREALVNRSDLKGGEKDVERAEAAAGAARSAWFPTVYAGASYQMNNRDVPFGRDNDAWMAGVNLRWELFDGL
RRSHDQAKAGAVRQAALQYLEQQRKEVVLRVREAALRREEAGKRLEVARHALLAADEGMRIVAKRYENGLATMVELLDAQ
SALNRSRTGLVERESEYLLATARVYHAAGLFLKETVK

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48678; Mature: 48678

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLSPPVLLAADRSVTLQEALQSALERNHLVNGARFEREAAERGAAASRSRYFPHIFLE
CEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCEEEEE
EGFAASDAPDRVFMMKLDQGRFTLDDFQLENLNTPSSYRDFRTAVTLEQPLFDLGIGYGR
CCCCCCCCCCEEEEEEECCCCEEECCEEECCCCCCHHHHHHHHHHHHHCCHHHHCCCCCH
EMAEKEAERAGFSLAQRREDVGLAVYAAYLDVQKGRVTLAATEKEVAEARESLRVAQARS
HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHC
REGTALRSDELRARTFLSESEQRTITALNDLRLARMRLALATGEDAGGSLDIAEELISSP
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
VRLSEDELVREALVNRSDLKGGEKDVERAEAAAGAARSAWFPTVYAGASYQMNNRDVPFG
CCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCHHHCCCCEEECCCEEEECCCCCCCC
RDNDAWMAGVNLRWELFDGLRRSHDQAKAGAVRQAALQYLEQQRKEVVLRVREAALRREE
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGKRLEVARHALLAADEGMRIVAKRYENGLATMVELLDAQSALNRSRTGLVERESEYLLA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
TARVYHAAGLFLKETVK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVLSPPVLLAADRSVTLQEALQSALERNHLVNGARFEREAAERGAAASRSRYFPHIFLE
CEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCEEEEE
EGFAASDAPDRVFMMKLDQGRFTLDDFQLENLNTPSSYRDFRTAVTLEQPLFDLGIGYGR
CCCCCCCCCCEEEEEEECCCCEEECCEEECCCCCCHHHHHHHHHHHHHCCHHHHCCCCCH
EMAEKEAERAGFSLAQRREDVGLAVYAAYLDVQKGRVTLAATEKEVAEARESLRVAQARS
HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHC
REGTALRSDELRARTFLSESEQRTITALNDLRLARMRLALATGEDAGGSLDIAEELISSP
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
VRLSEDELVREALVNRSDLKGGEKDVERAEAAAGAARSAWFPTVYAGASYQMNNRDVPFG
CCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCHHHCCCCEEECCCEEEECCCCCCCC
RDNDAWMAGVNLRWELFDGLRRSHDQAKAGAVRQAALQYLEQQRKEVVLRVREAALRREE
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGKRLEVARHALLAADEGMRIVAKRYENGLATMVELLDAQSALNRSRTGLVERESEYLLA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
TARVYHAAGLFLKETVK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA