| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39995463
Identifier: 39995463
GI number: 39995463
Start: 384038
End: 385228
Strand: Direct
Name: 39995463
Synonym: GSU0354
Alternate gene names: NA
Gene position: 384038-385228 (Clockwise)
Preceding gene: 39995462
Following gene: 39995464
Centisome position: 10.07
GC content: 59.36
Gene sequence:
>1191_bases ATGCAGTCAACTGAAGCTTCAGCCCATCGGGAACTCGAAAACACCATTGTACGCCTGTTGAAGCGTCGTCCCTTCTATGG TCAATTTCTGTTAGCGATGCGTCGTGAGCAGCGGCCCGGGACTTTTCCCTTGGGGGTAACGTTTCGGGACGGTGTCCCGG TCTTGATGGTGAATCCTCACCGGCTCGAAGCCGAGTCTCCTGCAATCAGAGAAGGGTTGCTCGAGCATTGCGTCAGACAT GTCATTCACCTACACATGGTGCGACGAAAAGGGCGTAACGGCCATGATTGGGATGTGGCCTGCGATTTGGCAATTAACCC GTCCATTGAACATCTGCCCGCCGATGCGCCCCTTCCTGTTCATTTCTCCGCCGACGATGGTCTGGCTGCCGAAGAGTATT ACAGCCTGCTCTCCAACCCGTTCGATGCCGGAAGCTTGGAAGGGCAGGGTACAGGACGAGCAAGTCGGGACGAAGGCGGT GCAACTGGGGATGGCTGCGACCGGGACCTGAACGTCACTACGGTTGACGACCACAGTGCCTGGGAAGAAGCTGACTCGAC TCCGTTTCGACTCGCTGAGGAGGTGGTGCGCGGCATGGTGCGTGAGGCCTGGCGACAGGCCGATGGCCACGTGCCTGCCG ATATCCGCCGTGTTATAGAGGGAATGCTTGCACCCTCACCGATTCCGTGGCAGCAGGTCCTGCGGCAGTTCGTTGCGGCT GCTGGACGTACCGGCCGTGAAACGAGTTGGCTGAAAGAGCACCGGCGCTTCGTTCACATGACGCCTGGTATCCGCAAGCG AAGGCGGTTAAATCTGCTGGTCGGGATCGATGTGAGCGAATCCACCGACACCGTGGAGCTCCGGGAGGCATTTGCCCGGG AGTTAGTCCGGATATCCCGCGGTCGTGATGCACAGGTAACCGTTCTCTACGCCAACAGCCGGATACAGCAAATGGAGAGC TTCAGGGGAGCGCTGGGCTTGACTGAGGCTTACTACGGCGGTGGATTCACGGATCTTCGTCCTGTCTTTGAACATGCACG GACAATGATTCCCCGTCCCGCAGCAGTCATCTACCTGACCGATGGGGTCGGGCCCGCCCCCGAACAGATGGAGTTCCCCA CCCTGTGGGTGCTGACGCGGGCAGGGGAGAAACCCGTCCCCTGGGGGGTGGAATTGAGGCTGGAGGTATGA
Upstream 100 bases:
>100_bases CTGGTAGGAGGGATATTGAGAGTGGGGTTCGGCCGGTTCGTACTGTTGGTTGGAATCGGAAAACTCGCACGCTACTCGTT CATTGCTTGGGTGACGGTCC
Downstream 100 bases:
>100_bases CCATGGGAGAACTGAAACCGATGACCACGGAGTCGGTGAAAGAACTGCTGGAAGAGGCTGGGGCTAAAGCCATGGCACGC TCGGGGAGAACTGAAAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MQSTEASAHRELENTIVRLLKRRPFYGQFLLAMRREQRPGTFPLGVTFRDGVPVLMVNPHRLEAESPAIREGLLEHCVRH VIHLHMVRRKGRNGHDWDVACDLAINPSIEHLPADAPLPVHFSADDGLAAEEYYSLLSNPFDAGSLEGQGTGRASRDEGG ATGDGCDRDLNVTTVDDHSAWEEADSTPFRLAEEVVRGMVREAWRQADGHVPADIRRVIEGMLAPSPIPWQQVLRQFVAA AGRTGRETSWLKEHRRFVHMTPGIRKRRRLNLLVGIDVSESTDTVELREAFARELVRISRGRDAQVTVLYANSRIQQMES FRGALGLTEAYYGGGFTDLRPVFEHARTMIPRPAAVIYLTDGVGPAPEQMEFPTLWVLTRAGEKPVPWGVELRLEV
Sequences:
>Translated_396_residues MQSTEASAHRELENTIVRLLKRRPFYGQFLLAMRREQRPGTFPLGVTFRDGVPVLMVNPHRLEAESPAIREGLLEHCVRH VIHLHMVRRKGRNGHDWDVACDLAINPSIEHLPADAPLPVHFSADDGLAAEEYYSLLSNPFDAGSLEGQGTGRASRDEGG ATGDGCDRDLNVTTVDDHSAWEEADSTPFRLAEEVVRGMVREAWRQADGHVPADIRRVIEGMLAPSPIPWQQVLRQFVAA AGRTGRETSWLKEHRRFVHMTPGIRKRRRLNLLVGIDVSESTDTVELREAFARELVRISRGRDAQVTVLYANSRIQQMES FRGALGLTEAYYGGGFTDLRPVFEHARTMIPRPAAVIYLTDGVGPAPEQMEFPTLWVLTRAGEKPVPWGVELRLEV >Mature_396_residues MQSTEASAHRELENTIVRLLKRRPFYGQFLLAMRREQRPGTFPLGVTFRDGVPVLMVNPHRLEAESPAIREGLLEHCVRH VIHLHMVRRKGRNGHDWDVACDLAINPSIEHLPADAPLPVHFSADDGLAAEEYYSLLSNPFDAGSLEGQGTGRASRDEGG ATGDGCDRDLNVTTVDDHSAWEEADSTPFRLAEEVVRGMVREAWRQADGHVPADIRRVIEGMLAPSPIPWQQVLRQFVAA AGRTGRETSWLKEHRRFVHMTPGIRKRRRLNLLVGIDVSESTDTVELREAFARELVRISRGRDAQVTVLYANSRIQQMES FRGALGLTEAYYGGGFTDLRPVFEHARTMIPRPAAVIYLTDGVGPAPEQMEFPTLWVLTRAGEKPVPWGVELRLEV
Specific function: Unknown
COG id: COG3864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018698 [H]
Pfam domain/function: PF09967 DUF2201 [H]
EC number: NA
Molecular weight: Translated: 44425; Mature: 44425
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTEASAHRELENTIVRLLKRRPFYGQFLLAMRREQRPGTFPLGVTFRDGVPVLMVNPH CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCC RLEAESPAIREGLLEHCVRHVIHLHMVRRKGRNGHDWDVACDLAINPSIEHLPADAPLPV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHCCCCCCCEE HFSADDGLAAEEYYSLLSNPFDAGSLEGQGTGRASRDEGGATGDGCDRDLNVTTVDDHSA EECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHH WEEADSTPFRLAEEVVRGMVREAWRQADGHVPADIRRVIEGMLAPSPIPWQQVLRQFVAA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH AGRTGRETSWLKEHRRFVHMTPGIRKRRRLNLLVGIDVSESTDTVELREAFARELVRISR CCCCCCCHHHHHHHCCEEECCCCHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC GRDAQVTVLYANSRIQQMESFRGALGLTEAYYGGGFTDLRPVFEHARTMIPRPAAVIYLT CCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEE DGVGPAPEQMEFPTLWVLTRAGEKPVPWGVELRLEV CCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEC >Mature Secondary Structure MQSTEASAHRELENTIVRLLKRRPFYGQFLLAMRREQRPGTFPLGVTFRDGVPVLMVNPH CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCC RLEAESPAIREGLLEHCVRHVIHLHMVRRKGRNGHDWDVACDLAINPSIEHLPADAPLPV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHCCCCCCCEE HFSADDGLAAEEYYSLLSNPFDAGSLEGQGTGRASRDEGGATGDGCDRDLNVTTVDDHSA EECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHH WEEADSTPFRLAEEVVRGMVREAWRQADGHVPADIRRVIEGMLAPSPIPWQQVLRQFVAA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH AGRTGRETSWLKEHRRFVHMTPGIRKRRRLNLLVGIDVSESTDTVELREAFARELVRISR CCCCCCCHHHHHHHCCEEECCCCHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC GRDAQVTVLYANSRIQQMESFRGALGLTEAYYGGGFTDLRPVFEHARTMIPRPAAVIYLT CCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEE DGVGPAPEQMEFPTLWVLTRAGEKPVPWGVELRLEV CCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8168477; 10360571 [H]