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The map label for this gene is yqaA [H]

Identifier: 39995462

GI number: 39995462

Start: 383605

End: 384051

Strand: Direct

Name: yqaA [H]

Synonym: GSU0353

Alternate gene names: 39995462

Gene position: 383605-384051 (Clockwise)

Preceding gene: 39995461

Following gene: 39995463

Centisome position: 10.06

GC content: 55.7

Gene sequence:

>447_bases
ATGGAACAACAACTTGCCGCTGACGGCCTGATTGTCTTATTTGTGGTGAGTTTCCTTGCAGCCACCCTCATCCCTGTCGG
TTCCGAGTGGTTACTGGTCGCTCTGCTGACCCAGGATTACAACCCGCTGGCTGTTACAACTACGGCAACTGTCGGCAACA
TTCTCGGCGCTTGCACCACCTGGGCCGTCGGGATGTGGGGGGGCGTGTATCTGGTACGGCGGATCCTTCGGATATCGGAG
GACGCTGAGCGTAGAGCAGAGCAGTTCTATCGTCGGTACGGTTACTGGTCGCTTCTTCTGTCATGGCTTCCGATACTCGG
AGATCCCCTTTGTCTGGTAGGAGGGATATTGAGAGTGGGGTTCGGCCGGTTCGTACTGTTGGTTGGAATCGGAAAACTCG
CACGCTACTCGTTCATTGCTTGGGTGACGGTCCATGCAGTCAACTGA

Upstream 100 bases:

>100_bases
GGTTGAAGCTCTCCGCCGCGGATTAAACCGAAGGATGGTAGCATTAGGGCTGGGAGGATAGTCTTTGACATTGATCGGCG
CCTTCCGCTAATGTCGTACC

Downstream 100 bases:

>100_bases
AGCTTCAGCCCATCGGGAACTCGAAAACACCATTGTACGCCTGTTGAAGCGTCGTCCCTTCTATGGTCAATTTCTGTTAG
CGATGCGTCGTGAGCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MEQQLAADGLIVLFVVSFLAATLIPVGSEWLLVALLTQDYNPLAVTTTATVGNILGACTTWAVGMWGGVYLVRRILRISE
DAERRAEQFYRRYGYWSLLLSWLPILGDPLCLVGGILRVGFGRFVLLVGIGKLARYSFIAWVTVHAVN

Sequences:

>Translated_148_residues
MEQQLAADGLIVLFVVSFLAATLIPVGSEWLLVALLTQDYNPLAVTTTATVGNILGACTTWAVGMWGGVYLVRRILRISE
DAERRAEQFYRRYGYWSLLLSWLPILGDPLCLVGGILRVGFGRFVLLVGIGKLARYSFIAWVTVHAVN
>Mature_148_residues
MEQQLAADGLIVLFVVSFLAATLIPVGSEWLLVALLTQDYNPLAVTTTATVGNILGACTTWAVGMWGGVYLVRRILRISE
DAERRAEQFYRRYGYWSLLLSWLPILGDPLCLVGGILRVGFGRFVLLVGIGKLARYSFIAWVTVHAVN

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=143, Percent_Identity=39.8601398601399, Blast_Score=83, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 16346; Mature: 16346

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQLAADGLIVLFVVSFLAATLIPVGSEWLLVALLTQDYNPLAVTTTATVGNILGACTT
CCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
WAVGMWGGVYLVRRILRISEDAERRAEQFYRRYGYWSLLLSWLPILGDPLCLVGGILRVG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
FGRFVLLVGIGKLARYSFIAWVTVHAVN
HHHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MEQQLAADGLIVLFVVSFLAATLIPVGSEWLLVALLTQDYNPLAVTTTATVGNILGACTT
CCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
WAVGMWGGVYLVRRILRISEDAERRAEQFYRRYGYWSLLLSWLPILGDPLCLVGGILRVG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
FGRFVLLVGIGKLARYSFIAWVTVHAVN
HHHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]