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The map label for this gene is 39995281

Identifier: 39995281

GI number: 39995281

Start: 186838

End: 187320

Strand: Direct

Name: 39995281

Synonym: GSU0170

Alternate gene names: NA

Gene position: 186838-187320 (Clockwise)

Preceding gene: 39995280

Following gene: 39995282

Centisome position: 4.9

GC content: 64.6

Gene sequence:

>483_bases
ATGACCAAACAGCACCTCGTTGCCACTATTATTGCCCGGCTTGAGGCCGATCTTGCCCTGTTCACCGCGGCGGCCCTCCA
TGCCCATGCCGCTGCTACCCATGAAGAGTGCCAGCCGGATAACAAGTACGATACCACTGCGCTGGAGGCATCCTATGTCG
CCCAGGGGCAGGCCAACCGGGCACAGGAGATCCGCCAGAGCCTGGAGGCATACCGCTCCCTGGAACTGCAGGAGTTCGAC
GCCGGTGCGCCGGTGCGCTTGAGCGCCCTGGTGACCCTGGAGGACGAGGCGGGCAGGACGCGGCGGCTGTTCATCGGTCC
CCAGGCAGGCGGGATGAAGCTGGCCGACCCGGCGGGCGAGATTGTGGTCATTACCCCTGCTTCTCCCCTGGGGAACAGGC
TGCTCGGTCTTGCGGCGGGCGATGAAGTGCAGGGGGTAGACGCCGGCAAGGGGAAGTTTTACACCATCGTGGCTGTTACC
TGA

Upstream 100 bases:

>100_bases
ACCTGGAGAGCGCCGAGGTGGCCGAAGAACGGGACCGGCTCTGCCAGGGGCACTGCGACCTGACGCTCTAGGAGCCTGTC
GGGGTATCTCTTCCGCGAAT

Downstream 100 bases:

>100_bases
GAAGAATCGTTGGGAGCAGTATGAAGATCTGGATCGATGCCGATGCCTGCCCGCGGGCAGTGAAAGAAATCCTCTTCCGG
GCCTCGACCCGGCTGCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Elongation Factor; GreA/GreB Domain-Containing Protein; Transcriptional Elongation Factor

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTKQHLVATIIARLEADLALFTAAALHAHAAATHEECQPDNKYDTTALEASYVAQGQANRAQEIRQSLEAYRSLELQEFD
AGAPVRLSALVTLEDEAGRTRRLFIGPQAGGMKLADPAGEIVVITPASPLGNRLLGLAAGDEVQGVDAGKGKFYTIVAVT

Sequences:

>Translated_160_residues
MTKQHLVATIIARLEADLALFTAAALHAHAAATHEECQPDNKYDTTALEASYVAQGQANRAQEIRQSLEAYRSLELQEFD
AGAPVRLSALVTLEDEAGRTRRLFIGPQAGGMKLADPAGEIVVITPASPLGNRLLGLAAGDEVQGVDAGKGKFYTIVAVT
>Mature_159_residues
TKQHLVATIIARLEADLALFTAAALHAHAAATHEECQPDNKYDTTALEASYVAQGQANRAQEIRQSLEAYRSLELQEFDA
GAPVRLSALVTLEDEAGRTRRLFIGPQAGGMKLADPAGEIVVITPASPLGNRLLGLAAGDEVQGVDAGKGKFYTIVAVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16939; Mature: 16808

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQHLVATIIARLEADLALFTAAALHAHAAATHEECQPDNKYDTTALEASYVAQGQANR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCHH
AQEIRQSLEAYRSLELQEFDAGAPVRLSALVTLEDEAGRTRRLFIGPQAGGMKLADPAGE
HHHHHHHHHHHHCCCCEECCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCEEEECCCCC
IVVITPASPLGNRLLGLAAGDEVQGVDAGKGKFYTIVAVT
EEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
TKQHLVATIIARLEADLALFTAAALHAHAAATHEECQPDNKYDTTALEASYVAQGQANR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCHH
AQEIRQSLEAYRSLELQEFDAGAPVRLSALVTLEDEAGRTRRLFIGPQAGGMKLADPAGE
HHHHHHHHHHHHCCCCEECCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCEEEECCCCC
IVVITPASPLGNRLLGLAAGDEVQGVDAGKGKFYTIVAVT
EEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA