| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995268
Identifier: 39995268
GI number: 39995268
Start: 175248
End: 176021
Strand: Direct
Name: 39995268
Synonym: GSU0157
Alternate gene names: NA
Gene position: 175248-176021 (Clockwise)
Preceding gene: 39995267
Following gene: 39995269
Centisome position: 4.59
GC content: 68.86
Gene sequence:
>774_bases GTGGGCGGTAATCATCGGATCGTAGTCAAGCTCGTCGCCGGAATCGCACTTGCGGCCGCCCTGGCAGGCTGCGGCAGGAA GGGGCCGCTGGTGCCGCCCGAATCCTTCGTGCCTGCCTCTGTCTCTACCCTGACGGTGGAGCAGAAGGATGACGCCTTCT ACGTCTCCTGGCCCGCGCCCGAGAAGGATGAGGGGGGCCGCCCCCTCAAGGACCTGGCCGGGTTCAGGGTCTACCGCAGG CCGGTGCTCCCGCCGGGGCAGGACTGCGAGGAGTGCCCCACCGCCTACACGCTGATCAGGACCGTGGACCTGGAGTATCC CCAGGACGTGCGTTCCTATGACGGCCGCTACGTGCTGGCCGACCGCGGCCTGACCAACGGGGCCACCTACCAGTACAAGG TTATCTCATTCAAGAAGGACGGCAGCGAGAGCGGGGCCTCGAACCGGGCCCGTCGCACGATGGTGGCGGCCCCGCCTGCG CCGCGCCTCGCCGCTTCATCGAGCGCAACCGGCGTCGCGCTCCAGTGGGAACCGTCCCCGCCTGCGACCGGGGAGCCCGT TGGCGCCTACATTTACCGCCGCCGGGGCGACGACCTCGCCAGCTTGGTCCTCTTGACGCCGTCGCCGGTGACCGGCACGA GCTACGAGGACCAGCGCCTGGAGCGGGGCGTCACCTATGTCTATCTGGTGCGCCAGGTCGTTGCCGTGGACGGACAACTG GTGGAAGGCGCCGCATCCAACACCGTACGGGGCGCCCTGACCGAACCGGAGTAG
Upstream 100 bases:
>100_bases CCGGCGGCACGGCCCTGGAGCGCGTCAAGGCGGAGATCGAGCGGGCCAAGGTGGGGAGATAGCGTGATTCGCGTCGCGGC ACAGGGCCGGGGAGGGGACA
Downstream 100 bases:
>100_bases GGGCCAGGCAGTGCGCGCTGCGGCCGGAACCGGGCGATAAGCCGCTAATCTTTTGACTTTTTAGGCCTTGCATGTTAAAA ATATCCACTTTTGTTTACAG
Product: fibronectin type III domain-containing protein
Products: NA
Alternate protein names: Fibronectin Type III Domain Protein; Fibronectin Type III; Lipoprotein
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MGGNHRIVVKLVAGIALAAALAGCGRKGPLVPPESFVPASVSTLTVEQKDDAFYVSWPAPEKDEGGRPLKDLAGFRVYRR PVLPPGQDCEECPTAYTLIRTVDLEYPQDVRSYDGRYVLADRGLTNGATYQYKVISFKKDGSESGASNRARRTMVAAPPA PRLAASSSATGVALQWEPSPPATGEPVGAYIYRRRGDDLASLVLLTPSPVTGTSYEDQRLERGVTYVYLVRQVVAVDGQL VEGAASNTVRGALTEPE
Sequences:
>Translated_257_residues MGGNHRIVVKLVAGIALAAALAGCGRKGPLVPPESFVPASVSTLTVEQKDDAFYVSWPAPEKDEGGRPLKDLAGFRVYRR PVLPPGQDCEECPTAYTLIRTVDLEYPQDVRSYDGRYVLADRGLTNGATYQYKVISFKKDGSESGASNRARRTMVAAPPA PRLAASSSATGVALQWEPSPPATGEPVGAYIYRRRGDDLASLVLLTPSPVTGTSYEDQRLERGVTYVYLVRQVVAVDGQL VEGAASNTVRGALTEPE >Mature_256_residues GGNHRIVVKLVAGIALAAALAGCGRKGPLVPPESFVPASVSTLTVEQKDDAFYVSWPAPEKDEGGRPLKDLAGFRVYRRP VLPPGQDCEECPTAYTLIRTVDLEYPQDVRSYDGRYVLADRGLTNGATYQYKVISFKKDGSESGASNRARRTMVAAPPAP RLAASSSATGVALQWEPSPPATGEPVGAYIYRRRGDDLASLVLLTPSPVTGTSYEDQRLERGVTYVYLVRQVVAVDGQLV EGAASNTVRGALTEPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27541; Mature: 27410
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50853 FN3 L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGNHRIVVKLVAGIALAAALAGCGRKGPLVPPESFVPASVSTLTVEQKDDAFYVSWPAP CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCC EKDEGGRPLKDLAGFRVYRRPVLPPGQDCEECPTAYTLIRTVDLEYPQDVRSYDGRYVLA CCCCCCCCHHHHHCCHHHHCCCCCCCCCHHHCCHHEEEEEEECCCCCHHHHHCCCEEEEE DRGLTNGATYQYKVISFKKDGSESGASNRARRTMVAAPPAPRLAASSSATGVALQWEPSP CCCCCCCCEEEEEEEEEECCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCEEEEEECCCC PATGEPVGAYIYRRRGDDLASLVLLTPSPVTGTSYEDQRLERGVTYVYLVRQVVAVDGQL CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCEE VEGAASNTVRGALTEPE ECCCCCCCEECCCCCCC >Mature Secondary Structure GGNHRIVVKLVAGIALAAALAGCGRKGPLVPPESFVPASVSTLTVEQKDDAFYVSWPAP CCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCC EKDEGGRPLKDLAGFRVYRRPVLPPGQDCEECPTAYTLIRTVDLEYPQDVRSYDGRYVLA CCCCCCCCHHHHHCCHHHHCCCCCCCCCHHHCCHHEEEEEEECCCCCHHHHHCCCEEEEE DRGLTNGATYQYKVISFKKDGSESGASNRARRTMVAAPPAPRLAASSSATGVALQWEPSP CCCCCCCCEEEEEEEEEECCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCEEEEEECCCC PATGEPVGAYIYRRRGDDLASLVLLTPSPVTGTSYEDQRLERGVTYVYLVRQVVAVDGQL CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCEE VEGAASNTVRGALTEPE ECCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA