| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995229
Identifier: 39995229
GI number: 39995229
Start: 133254
End: 133859
Strand: Reverse
Name: 39995229
Synonym: GSU0118
Alternate gene names: NA
Gene position: 133859-133254 (Counterclockwise)
Preceding gene: 39995230
Following gene: 39995228
Centisome position: 3.51
GC content: 65.02
Gene sequence:
>606_bases ATGTGGTTTCTCCGCACCGGTGTACTTCTCTGGCTCCTGTCGACCGTTGCCATCGGCACAGTGTCGGCTGCGCCCCCGCC TGCCCGCCCCGAAACCGGCAAGGGCGTCCTGCTGGTAAAAAACTCGCTCGCGCATGATAATGCCGGCGGGGGGTCTTTTG TCGTCATCTATCGGGAACCCGGCATTGGTCGCATCGGCGAACTGCGGGTGGCATCGCTTCCCGCTCTCGCCGGAGTGGTC AAGACCCCGCCAGGGGTACTTGCCCTGGCGGTAACCGCTACAAAGGGGGAGTGGCTGAGGGTTCACTATGACGATGCAGG CCGGTCCGGCTGGCTGGAACCCCGCCGGACCTGGACCTACCTTACCTGGGAAGAGTATCTTCGCGGTAAGACGGCACGGC TGCTGCGCGGACTGAGGAAAGAATTCTACCTGGCCCGGAGCGGGCCGGACGGCAGTGCCCCGGAACTCCCCCCGCTCACG CCGGAGCGGAGCATGCGAATTCTTGACGTTGACGGAGACCGGGCCAGGGTCCTTGTGGACCTGAGCGTGATGGCGTGGCT GCGCTGGCGCGACCCGGACGGGCGCTTACTGATCACCGTTGAGTGA
Upstream 100 bases:
>100_bases AACCCCTTGAGCAGAGCCCTTGGGGCAAGATGGCGGTGGTCAGCGATCCGGACGGCAACCTCTTCGCCCTGGTGGACCGG TAAGGCATTCCGGCTCTATC
Downstream 100 bases:
>100_bases CGCTGGCGGGCAGACTGTCCGGTAACGGCACATTCTCTGCGGAAAAAAACATTGACGCCACGCACTCACCGTGGTATCTG AAGTCGCTATGAAGAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MWFLRTGVLLWLLSTVAIGTVSAAPPPARPETGKGVLLVKNSLAHDNAGGGSFVVIYREPGIGRIGELRVASLPALAGVV KTPPGVLALAVTATKGEWLRVHYDDAGRSGWLEPRRTWTYLTWEEYLRGKTARLLRGLRKEFYLARSGPDGSAPELPPLT PERSMRILDVDGDRARVLVDLSVMAWLRWRDPDGRLLITVE
Sequences:
>Translated_201_residues MWFLRTGVLLWLLSTVAIGTVSAAPPPARPETGKGVLLVKNSLAHDNAGGGSFVVIYREPGIGRIGELRVASLPALAGVV KTPPGVLALAVTATKGEWLRVHYDDAGRSGWLEPRRTWTYLTWEEYLRGKTARLLRGLRKEFYLARSGPDGSAPELPPLT PERSMRILDVDGDRARVLVDLSVMAWLRWRDPDGRLLITVE >Mature_201_residues MWFLRTGVLLWLLSTVAIGTVSAAPPPARPETGKGVLLVKNSLAHDNAGGGSFVVIYREPGIGRIGELRVASLPALAGVV KTPPGVLALAVTATKGEWLRVHYDDAGRSGWLEPRRTWTYLTWEEYLRGKTARLLRGLRKEFYLARSGPDGSAPELPPLT PERSMRILDVDGDRARVLVDLSVMAWLRWRDPDGRLLITVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22146; Mature: 22146
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWFLRTGVLLWLLSTVAIGTVSAAPPPARPETGKGVLLVKNSLAHDNAGGGSFVVIYREP CEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECC GIGRIGELRVASLPALAGVVKTPPGVLALAVTATKGEWLRVHYDDAGRSGWLEPRRTWTY CCCCCCCEEEECCCHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEE LTWEEYLRGKTARLLRGLRKEFYLARSGPDGSAPELPPLTPERSMRILDVDGDRARVLVD EEHHHHHCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEE LSVMAWLRWRDPDGRLLITVE EEEEEEEEEECCCCEEEEEEC >Mature Secondary Structure MWFLRTGVLLWLLSTVAIGTVSAAPPPARPETGKGVLLVKNSLAHDNAGGGSFVVIYREP CEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECC GIGRIGELRVASLPALAGVVKTPPGVLALAVTATKGEWLRVHYDDAGRSGWLEPRRTWTY CCCCCCCEEEECCCHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEE LTWEEYLRGKTARLLRGLRKEFYLARSGPDGSAPELPPLTPERSMRILDVDGDRARVLVD EEHHHHHCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEE LSVMAWLRWRDPDGRLLITVE EEEEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA