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The map label for this gene is tniB

Identifier: 38638069

GI number: 38638069

Start: 428125

End: 428994

Strand: Direct

Name: tniB

Synonym: PHG408

Alternate gene names: NA

Gene position: 428125-428994 (Clockwise)

Preceding gene: 38638068

Following gene: 38638070

Centisome position: 94.69

GC content: 56.67

Gene sequence:

>870_bases
ATGCGCCCGCTGCTAACACATCTGCTCCCGGCCGCGAGAGAGCTGGCTATGTGCGACGATGGTGTCAGAATTAAAGGCTT
GGCACGTAGCCATTGGATAGATTACCCGCGCGCAACCCAAGCACTGGAGATTCTCGAGCGTCTCCTCCAAACACCTCAGC
GGGAGCGTATGCCGTGTCTGTTGCTGCACGGAGATTCCAACATCGGTAAGACGCAGATTGTCTCCAAGTTCCAGCGTCGT
CATCCACCCGAGTACGACGAAGGGAAGGGCGTCGAGTTGCGAAGTATTGTTGCCATGCAGATGCCACCGACACCGGAGCA
GCCGAGGTTCTATTCTTCGTTGCTCTTCGAACTGGGTGCTCCCTTCAACGCGGCGGCAAGGCTATCTGCGCTTGAGAACC
TGAGTCGTGCCTTGCTTCGAAAAGTCTCGGCGCGTATGCTGATCGTTGACGAGGTTCATCACTTGTTGGCAGGCAACTAT
CGGGAGCAGCGTGCATCCCTGAATTTGCTCAAGTTCCTCGCCAATGACTTGAAAATCGCGGTTGTCCTCGTTGGCACTCA
AGACGCCGTCTTGGCGCTCCAAACGGATCCTCAGATGGTCAGTCGATTCGCCCGTTTCGAGGTGCCGAGATGGCAGGAGA
CGGAGGCATTTCGTTCTCTTCTCGCAGCCTTCGAGATGATTTTGCCGCTTCGACGTCCGTCGAATCTCGCACGGCGAGAG
ATCGTACATGCCATTCTGACTGCAAGTGGAGGGCTAACCGGGGAAGTGTCGCGTGTCTTGACTGTTTCCGCAGAACTCGC
GATCCGGGATGGGAAGGAGGCCATCGACCTGGGTCACATAGAGAATGCAGCGCGAACCCTGCTCTCCTGA

Upstream 100 bases:

>100_bases
CAAACTCGGTACGTGCAAACACGTTGGACAAGCAATCTGAGCCGGCAGTGGATTACAACAAGCCGCCCCCAGTGTTCAAT
GTCGAGCCGCTGTAATTGCA

Downstream 100 bases:

>100_bases
GGGTGTCAGGCCTTGGCCCGTTGCTCCGCGTCCATTCGATGACGAAGCGTTTGGCGGTTGGCTCGGTCGCCTGGCCGCAA
GGTATCAGATCAGTGTTGAC

Product: putative TniB-like transposition protein

Products: NA

Alternate protein names: Transposition Helper Protein; TniB-Like Transposition Protein; Transposon Transposition Helper Protein C; Transposition Helper Protein Truncated; Tranposase Complex Protein; Transposase; Transposition Protein; Urease Subunit Alpha; TniB Protein

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRPLLTHLLPAARELAMCDDGVRIKGLARSHWIDYPRATQALEILERLLQTPQRERMPCLLLHGDSNIGKTQIVSKFQRR
HPPEYDEGKGVELRSIVAMQMPPTPEQPRFYSSLLFELGAPFNAAARLSALENLSRALLRKVSARMLIVDEVHHLLAGNY
REQRASLNLLKFLANDLKIAVVLVGTQDAVLALQTDPQMVSRFARFEVPRWQETEAFRSLLAAFEMILPLRRPSNLARRE
IVHAILTASGGLTGEVSRVLTVSAELAIRDGKEAIDLGHIENAARTLLS

Sequences:

>Translated_289_residues
MRPLLTHLLPAARELAMCDDGVRIKGLARSHWIDYPRATQALEILERLLQTPQRERMPCLLLHGDSNIGKTQIVSKFQRR
HPPEYDEGKGVELRSIVAMQMPPTPEQPRFYSSLLFELGAPFNAAARLSALENLSRALLRKVSARMLIVDEVHHLLAGNY
REQRASLNLLKFLANDLKIAVVLVGTQDAVLALQTDPQMVSRFARFEVPRWQETEAFRSLLAAFEMILPLRRPSNLARRE
IVHAILTASGGLTGEVSRVLTVSAELAIRDGKEAIDLGHIENAARTLLS
>Mature_289_residues
MRPLLTHLLPAARELAMCDDGVRIKGLARSHWIDYPRATQALEILERLLQTPQRERMPCLLLHGDSNIGKTQIVSKFQRR
HPPEYDEGKGVELRSIVAMQMPPTPEQPRFYSSLLFELGAPFNAAARLSALENLSRALLRKVSARMLIVDEVHHLLAGNY
REQRASLNLLKFLANDLKIAVVLVGTQDAVLALQTDPQMVSRFARFEVPRWQETEAFRSLLAAFEMILPLRRPSNLARRE
IVHAILTASGGLTGEVSRVLTVSAELAIRDGKEAIDLGHIENAARTLLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32386; Mature: 32386

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLLTHLLPAARELAMCDDGVRIKGLARSHWIDYPRATQALEILERLLQTPQRERMPCL
CCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCEE
LLHGDSNIGKTQIVSKFQRRHPPEYDEGKGVELRSIVAMQMPPTPEQPRFYSSLLFELGA
EEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHCC
PFNAAARLSALENLSRALLRKVSARMLIVDEVHHLLAGNYREQRASLNLLKFLANDLKIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEE
VVLVGTQDAVLALQTDPQMVSRFARFEVPRWQETEAFRSLLAAFEMILPLRRPSNLARRE
EEEEECCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IVHAILTASGGLTGEVSRVLTVSAELAIRDGKEAIDLGHIENAARTLLS
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRPLLTHLLPAARELAMCDDGVRIKGLARSHWIDYPRATQALEILERLLQTPQRERMPCL
CCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCEE
LLHGDSNIGKTQIVSKFQRRHPPEYDEGKGVELRSIVAMQMPPTPEQPRFYSSLLFELGA
EEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHCC
PFNAAARLSALENLSRALLRKVSARMLIVDEVHHLLAGNYREQRASLNLLKFLANDLKIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEE
VVLVGTQDAVLALQTDPQMVSRFARFEVPRWQETEAFRSLLAAFEMILPLRRPSNLARRE
EEEEECCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IVHAILTASGGLTGEVSRVLTVSAELAIRDGKEAIDLGHIENAARTLLS
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA