| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637981
Identifier: 38637981
GI number: 38637981
Start: 334374
End: 334913
Strand: Direct
Name: 38637981
Synonym: PHG320
Alternate gene names: NA
Gene position: 334374-334913 (Clockwise)
Preceding gene: 38637979
Following gene: 38637982
Centisome position: 73.95
GC content: 62.78
Gene sequence:
>540_bases ATGATACGCGGCGCAACATGCGCGCCGGCCGCCTTGACTTCTCGACGGCCTCGGTATCTTGGATGTAAGAGCAATCCAAA CCTTCCCGCCATGCGCTTCTCTTGCCTCGAACGCCACACCCCCATCGACTTCAATACCCGTCGCCAGGCCGCCTTCGCGC GCAAACAGCAGCGCGAGCGCGACAGGTACCCGCTCTTTGCGGATCACGTGGCCGCCGAGCAGCATTCTCCCGACGAGGAA CTTGCCCGTCGGCAACGGCGCTCCGACAACCTTGAAAGGACAACGCGCGCCTTGCACGCACGCGTCTGGCGAGAGAAGCG CGCCATCTACTTCTCGCTCTCCGATGAACAACGTGCGGAGATCCGCGCAAAGTGGAAGGCATGGACCGGGCCTACAACCG CCCTCTACTTCGCCTACATCGTCGACACGGTCAGTGGCGAGTATGAGCGACGCTCGGAAGCCGCACGTGCAGACACACTG GCCATCCGCCGACGCGTTCTAGCCTCGCTGCCCGAGCAAACTGCATTGGAGATCGCCTGA
Upstream 100 bases:
>100_bases CGCGGAACTTGAGAATGGGGAGCTCAGACATGGCTTTCCGTGAAAGACGCGGCAAATTCTAAAGCTTTCGCCTTCAGGTG CGGCGGAAATCAGCCTGAGA
Downstream 100 bases:
>100_bases TGGTCCCCACCGACGAACAGGCTTCCGTTGTCGACGCGGTCAAGGCCGGCGGGCCGCTGAAAGTCAAGGCGTATGCGGGC GCCGGCAAGACGTCGACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MIRGATCAPAALTSRRPRYLGCKSNPNLPAMRFSCLERHTPIDFNTRRQAAFARKQQRERDRYPLFADHVAAEQHSPDEE LARRQRRSDNLERTTRALHARVWREKRAIYFSLSDEQRAEIRAKWKAWTGPTTALYFAYIVDTVSGEYERRSEAARADTL AIRRRVLASLPEQTALEIA
Sequences:
>Translated_179_residues MIRGATCAPAALTSRRPRYLGCKSNPNLPAMRFSCLERHTPIDFNTRRQAAFARKQQRERDRYPLFADHVAAEQHSPDEE LARRQRRSDNLERTTRALHARVWREKRAIYFSLSDEQRAEIRAKWKAWTGPTTALYFAYIVDTVSGEYERRSEAARADTL AIRRRVLASLPEQTALEIA >Mature_179_residues MIRGATCAPAALTSRRPRYLGCKSNPNLPAMRFSCLERHTPIDFNTRRQAAFARKQQRERDRYPLFADHVAAEQHSPDEE LARRQRRSDNLERTTRALHARVWREKRAIYFSLSDEQRAEIRAKWKAWTGPTTALYFAYIVDTVSGEYERRSEAARADTL AIRRRVLASLPEQTALEIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20789; Mature: 20789
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRGATCAPAALTSRRPRYLGCKSNPNLPAMRFSCLERHTPIDFNTRRQAAFARKQQRER CCCCCCCCCHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH DRYPLFADHVAAEQHSPDEELARRQRRSDNLERTTRALHARVWREKRAIYFSLSDEQRAE CCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHH IRAKWKAWTGPTTALYFAYIVDTVSGEYERRSEAARADTLAIRRRVLASLPEQTALEIA HHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC >Mature Secondary Structure MIRGATCAPAALTSRRPRYLGCKSNPNLPAMRFSCLERHTPIDFNTRRQAAFARKQQRER CCCCCCCCCHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH DRYPLFADHVAAEQHSPDEELARRQRRSDNLERTTRALHARVWREKRAIYFSLSDEQRAE CCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHH IRAKWKAWTGPTTALYFAYIVDTVSGEYERRSEAARADTLAIRRRVLASLPEQTALEIA HHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA