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The map label for this gene is 38637947

Identifier: 38637947

GI number: 38637947

Start: 303943

End: 304911

Strand: Direct

Name: 38637947

Synonym: PHG286

Alternate gene names: NA

Gene position: 303943-304911 (Clockwise)

Preceding gene: 38637946

Following gene: 38637948

Centisome position: 67.22

GC content: 62.75

Gene sequence:

>969_bases
GTGGGATGGGTTCAAATTCAGTATATAACAGCGGGTATGGCAAAAATGGACTCCCTCTGGCTCAGCAATCCCAGCCTGGC
CTACCGTGACTGGCAGGCGCGTGAGGCGGCTGGCTCTGATCGCCGCCCTTTCTCCGCGCGCTCGATCGTCCAGCACCAGG
CGATGTTCGAGAACTTCCGACGACACTTGCTGGCGAGGAGCGCGACCGTTGCCTCATTTGGCACCGCCGATATTGAGTCG
TTTTTGCAGACGCCCGACGCTAGGTCATACTCTCCGGCCACACGCATGCGGTACGTGAAGCTGCTGGACCGCCTGTGCCG
GCATCTGGTCTTCGCCGGTGTGCGCCTGGACAACCCAGCCGCCCTGATGCTTTCCGCCGAGCGCTGGCCAGACCAAGAGC
CCACACCCCAGTTCCTTGACGAGGCCGAGGACGGGCGGCTGCAAGCCTATCTTCAATCCCCTGCCGACGATCTGTCCGGC
TTGCGTAGCCGGGCGATCGTCGCGATGTTTCTCGCAACGGGGATTACCGCGGCGGAAGCGCGAGCCGCGCGTTTGGGGGA
CCTAGTGCCGGATACAAACCCGCCCTATCTCTTCGTGACGGGACATGGGGCGCGGGACGCGCGCACTGTTCACGTGGCCG
AATTCGCTGTATCGCTACTTCAGGCCTGGCATGCCCGCCGCTCAACGCTTCCCGTCCACGGCGACCTGCTTTTTACCCTT
ACCCCGGATGGCCGCCCCATCACCGACATGAGCTTTGGCCGGATCGTGGCCGCCGCGCTGGAAGCGATAGAATTCTCCGG
CGTCGAGCCAAGTCCCCGCACGCTGCGCAATACTTTTTGCCGGCGTCAGCTGCTCGCTGGCTGTACGCACGACGACGTGA
CCCGGATCTTAGGACTTGCCAGCAATCGCACTTGCGACCGCATTGCCGCTACCATTTCGGCTGCCCGACGGCGAAAAATC
CTGAAATGA

Upstream 100 bases:

>100_bases
TACCCGCGCAAAGCTCGCCGCGCGCCGCAACCATTATGGGCGGCCGCGATTCTGAACTCTCGCCTGCAAGCCATATCCGC
CGCATAGCGGCGGCAGGGGT

Downstream 100 bases:

>100_bases
TCGGGGTTTCAGCGCATCTCACTATTGCACTCGCGCTTGCATTTGCTATTCTTCGCGGATGCGATGTACGCGATATCCCG
CGCGCACGCATTTCTTAATC

Product: putative integrase/recombinase

Products: NA

Alternate protein names: Phage Integrase; Phage Integrase Family Protein; Integrase/Recombinase; Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Or Site-Specific Recombinase

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MGWVQIQYITAGMAKMDSLWLSNPSLAYRDWQAREAAGSDRRPFSARSIVQHQAMFENFRRHLLARSATVASFGTADIES
FLQTPDARSYSPATRMRYVKLLDRLCRHLVFAGVRLDNPAALMLSAERWPDQEPTPQFLDEAEDGRLQAYLQSPADDLSG
LRSRAIVAMFLATGITAAEARAARLGDLVPDTNPPYLFVTGHGARDARTVHVAEFAVSLLQAWHARRSTLPVHGDLLFTL
TPDGRPITDMSFGRIVAAALEAIEFSGVEPSPRTLRNTFCRRQLLAGCTHDDVTRILGLASNRTCDRIAATISAARRRKI
LK

Sequences:

>Translated_322_residues
MGWVQIQYITAGMAKMDSLWLSNPSLAYRDWQAREAAGSDRRPFSARSIVQHQAMFENFRRHLLARSATVASFGTADIES
FLQTPDARSYSPATRMRYVKLLDRLCRHLVFAGVRLDNPAALMLSAERWPDQEPTPQFLDEAEDGRLQAYLQSPADDLSG
LRSRAIVAMFLATGITAAEARAARLGDLVPDTNPPYLFVTGHGARDARTVHVAEFAVSLLQAWHARRSTLPVHGDLLFTL
TPDGRPITDMSFGRIVAAALEAIEFSGVEPSPRTLRNTFCRRQLLAGCTHDDVTRILGLASNRTCDRIAATISAARRRKI
LK
>Mature_321_residues
GWVQIQYITAGMAKMDSLWLSNPSLAYRDWQAREAAGSDRRPFSARSIVQHQAMFENFRRHLLARSATVASFGTADIESF
LQTPDARSYSPATRMRYVKLLDRLCRHLVFAGVRLDNPAALMLSAERWPDQEPTPQFLDEAEDGRLQAYLQSPADDLSGL
RSRAIVAMFLATGITAAEARAARLGDLVPDTNPPYLFVTGHGARDARTVHVAEFAVSLLQAWHARRSTLPVHGDLLFTLT
PDGRPITDMSFGRIVAAALEAIEFSGVEPSPRTLRNTFCRRQLLAGCTHDDVTRILGLASNRTCDRIAATISAARRRKIL
K

Specific function: Unknown

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35748; Mature: 35617

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWVQIQYITAGMAKMDSLWLSNPSLAYRDWQAREAAGSDRRPFSARSIVQHQAMFENFR
CCEEEEEEEHHHHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RHLLARSATVASFGTADIESFLQTPDARSYSPATRMRYVKLLDRLCRHLVFAGVRLDNPA
HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ALMLSAERWPDQEPTPQFLDEAEDGRLQAYLQSPADDLSGLRSRAIVAMFLATGITAAEA
EEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH
RAARLGDLVPDTNPPYLFVTGHGARDARTVHVAEFAVSLLQAWHARRSTLPVHGDLLFTL
HHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
TPDGRPITDMSFGRIVAAALEAIEFSGVEPSPRTLRNTFCRRQLLAGCTHDDVTRILGLA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
SNRTCDRIAATISAARRRKILK
CCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GWVQIQYITAGMAKMDSLWLSNPSLAYRDWQAREAAGSDRRPFSARSIVQHQAMFENFR
CEEEEEEEHHHHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RHLLARSATVASFGTADIESFLQTPDARSYSPATRMRYVKLLDRLCRHLVFAGVRLDNPA
HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ALMLSAERWPDQEPTPQFLDEAEDGRLQAYLQSPADDLSGLRSRAIVAMFLATGITAAEA
EEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH
RAARLGDLVPDTNPPYLFVTGHGARDARTVHVAEFAVSLLQAWHARRSTLPVHGDLLFTL
HHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
TPDGRPITDMSFGRIVAAALEAIEFSGVEPSPRTLRNTFCRRQLLAGCTHDDVTRILGLA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
SNRTCDRIAATISAARRRKILK
CCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA