| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637946
Identifier: 38637946
GI number: 38637946
Start: 302818
End: 303204
Strand: Direct
Name: 38637946
Synonym: PHG285
Alternate gene names: NA
Gene position: 302818-303204 (Clockwise)
Preceding gene: 38637945
Following gene: 38637947
Centisome position: 66.97
GC content: 62.53
Gene sequence:
>387_bases ATGAGCGAATTCGACAAGGCGTTGCACCAGGAAGCGAAGGCACTCAGCGTGAACCTCGATGGCACGCCCGAGGCGCTCCT GACCGTGGCGCACGCCGGCTACAAGGCTTGGGCCAAGGAAGGCAACCTGCATTTCCCAGACGAAACGCGCTACGCCCTGC TCCATGAGATCCTGCGTTACTGCGCCGACGAGTGTTTGCTTGAGTGCTATCCGTCGCAGGAGCGCCGCCTGCGCGAGATT GCCGAGATGCTAGATCAGCGCTATCCGCGCTATGCCTGTACGCGAGCGCGTCTGCGTGCGCGCCGCAATCGCTACGGCAG GATCTGCGACGATGCACGCCGTGCCCCCCCTGCGTCTGCCAGCAATGATGTCACGTCTCAAAGTTGA
Upstream 100 bases:
>100_bases CGACCGCCGATGTTGAGGTCGAGGAACGCTTCCGCGGCGGTACCAGAATTGGCTCTCGCTGGGTCGGCGTGGCTGATCTC CACCCGCTGCAGGAGGCCGC
Downstream 100 bases:
>100_bases TGGGAGACCGATCGCAAACAAATCAATGGGTTACAAGGCACCGCCTCAAGTTAACTGAGCCAAATTCTCACAGAAACTGG TTAAAAGACGCAGCTTGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSEFDKALHQEAKALSVNLDGTPEALLTVAHAGYKAWAKEGNLHFPDETRYALLHEILRYCADECLLECYPSQERRLREI AEMLDQRYPRYACTRARLRARRNRYGRICDDARRAPPASASNDVTSQS
Sequences:
>Translated_128_residues MSEFDKALHQEAKALSVNLDGTPEALLTVAHAGYKAWAKEGNLHFPDETRYALLHEILRYCADECLLECYPSQERRLREI AEMLDQRYPRYACTRARLRARRNRYGRICDDARRAPPASASNDVTSQS >Mature_127_residues SEFDKALHQEAKALSVNLDGTPEALLTVAHAGYKAWAKEGNLHFPDETRYALLHEILRYCADECLLECYPSQERRLREIA EMLDQRYPRYACTRARLRARRNRYGRICDDARRAPPASASNDVTSQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14716; Mature: 14584
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFDKALHQEAKALSVNLDGTPEALLTVAHAGYKAWAKEGNLHFPDETRYALLHEILRY CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH CADECLLECYPSQERRLREIAEMLDQRYPRYACTRARLRARRNRYGRICDDARRAPPASA HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC SNDVTSQS CCCCCCCC >Mature Secondary Structure SEFDKALHQEAKALSVNLDGTPEALLTVAHAGYKAWAKEGNLHFPDETRYALLHEILRY CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH CADECLLECYPSQERRLREIAEMLDQRYPRYACTRARLRARRNRYGRICDDARRAPPASA HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC SNDVTSQS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA