| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is nosX [H]
Identifier: 38637915
GI number: 38637915
Start: 270411
End: 271439
Strand: Direct
Name: nosX [H]
Synonym: PHG254
Alternate gene names: 38637915
Gene position: 270411-271439 (Clockwise)
Preceding gene: 38637914
Following gene: 38637919
Centisome position: 59.8
GC content: 71.53
Gene sequence:
>1029_bases ATGAACGCTTCCCGTCCTGACAGGCCGAACCCGGGACGGCGGCGGCTGCTGTGCGCATGGCCGCTGCTTGCCACGGGCTT ATGGATCCGGCCCGCACTGGCCGACCCGCGCGTAGCACAGTCGTCGCGCACGCTGATGGGTACCCGCGTCGACATCACCG TGCAAGCCCGCCATGCCGACACCGCGGCGCCGGCGATGGCGGCGGCCTGGGCCGAGATGGCGCGGCTCGCCGACCTGATG AGTCGCTACCGCGTCGGCAGCCAGGTCCACGCGCTGCAACTGGCGGCGGGCGTGCAGCCCGTGAAGGTCGCGCCGGAGAT GCTGCGCGTACTCGGCATGGCAAACCGGATGTCCCGGCGCAGTGCCGGCGCGTTCGACATCACCGTCGGCGCCTTCGCCG GCTGGAACTTCGATCCGGCCCACCCGGCAATGCCGGACCAGGCCGAGATCGCACGCGAACTGCCGCTGGTGAACTATCGC GACGTGGTGGTCGATCCCCGCGCTGAGACTGCCTTCCTGCGCCGGCAGGGCATGCGGATCGATCTGGGCGGCATTGCCAA GCTGCCGGTCCTGCAGGCCGGCATGGATGTCCTGCGGCAACACGGCCTTGACGGTGCGATGATCAACGGTGGCGGCGACG TGCTGGTCAGCGGCGCGCTGCAGGGGCGTGCATGGCGCATCGGCGTGCGCGACCCGCTCGCGCCAGCGCGACTGACCGGC GTGATCGCCATGCACGACGGCCTGGTCGCCGCATCAGGCGACTACGAACGCTGCTTCATGCAAGCCGGGCGCAGGTACCA CCATATCCTCGACCCCGGCACCGGCATGCCGAGCGCGGGGCCGCACGGCGTGACACTGGTGGCGCGCGGCGTGGACGACA TCAACGGGCTCGGCGCTGCCATCATGGTGGCAGGCGAGACCGCGGGCCGGCACTGGCTGGAGGCATTGCCCGGCGTCGAC GCCATGATCGTCGGGCCCGGCGGGCGGCGCTGGCTGTCGGCCGGCATGGCGGGTCGCCTGATCGGCTGA
Upstream 100 bases:
>100_bases GGGCATGATGCCGGCGCGCGGCGGCAGTACCTCGCTGCAGGACGGCGACGTCAAGGCCGCCGTCGACTTCATGGTGGCGC AATCGCACTGACGCATCGAC
Downstream 100 bases:
>100_bases CTGCACGCCTGGCAATGGCGGCCGCACAGGCGTGCGGCCTTCCCTCACAGGCTGTTTGAGAATCCCGCGGTCCCCGCATC AGCCGGGCACTGCCCGGCCA
Product: NosX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MNASRPDRPNPGRRRLLCAWPLLATGLWIRPALADPRVAQSSRTLMGTRVDITVQARHADTAAPAMAAAWAEMARLADLM SRYRVGSQVHALQLAAGVQPVKVAPEMLRVLGMANRMSRRSAGAFDITVGAFAGWNFDPAHPAMPDQAEIARELPLVNYR DVVVDPRAETAFLRRQGMRIDLGGIAKLPVLQAGMDVLRQHGLDGAMINGGGDVLVSGALQGRAWRIGVRDPLAPARLTG VIAMHDGLVAASGDYERCFMQAGRRYHHILDPGTGMPSAGPHGVTLVARGVDDINGLGAAIMVAGETAGRHWLEALPGVD AMIVGPGGRRWLSAGMAGRLIG
Sequences:
>Translated_342_residues MNASRPDRPNPGRRRLLCAWPLLATGLWIRPALADPRVAQSSRTLMGTRVDITVQARHADTAAPAMAAAWAEMARLADLM SRYRVGSQVHALQLAAGVQPVKVAPEMLRVLGMANRMSRRSAGAFDITVGAFAGWNFDPAHPAMPDQAEIARELPLVNYR DVVVDPRAETAFLRRQGMRIDLGGIAKLPVLQAGMDVLRQHGLDGAMINGGGDVLVSGALQGRAWRIGVRDPLAPARLTG VIAMHDGLVAASGDYERCFMQAGRRYHHILDPGTGMPSAGPHGVTLVARGVDDINGLGAAIMVAGETAGRHWLEALPGVD AMIVGPGGRRWLSAGMAGRLIG >Mature_342_residues MNASRPDRPNPGRRRLLCAWPLLATGLWIRPALADPRVAQSSRTLMGTRVDITVQARHADTAAPAMAAAWAEMARLADLM SRYRVGSQVHALQLAAGVQPVKVAPEMLRVLGMANRMSRRSAGAFDITVGAFAGWNFDPAHPAMPDQAEIARELPLVNYR DVVVDPRAETAFLRRQGMRIDLGGIAKLPVLQAGMDVLRQHGLDGAMINGGGDVLVSGALQGRAWRIGVRDPLAPARLTG VIAMHDGLVAASGDYERCFMQAGRRYHHILDPGTGMPSAGPHGVTLVARGVDDINGLGAAIMVAGETAGRHWLEALPGVD AMIVGPGGRRWLSAGMAGRLIG
Specific function: Involved in the conversion of aminoimidazole ribotide (AIR), a purine intermediate, to the 4-amino-5-hydroxymethyl-2- methyl pyrimidine (HMP) moiety of thiamine [H]
COG id: COG1477
COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ApbE family [H]
Homologues:
Organism=Escherichia coli, GI1788543, Length=274, Percent_Identity=21.1678832116788, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003374 [H]
Pfam domain/function: PF02424 ApbE [H]
EC number: NA
Molecular weight: Translated: 36358; Mature: 36358
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASRPDRPNPGRRRLLCAWPLLATGLWIRPALADPRVAQSSRTLMGTRVDITVQARHAD CCCCCCCCCCCCCCEEEEECHHHHCCCEEECCCCCCCHHCCCCEEEEEEEEEEEEECCCC TAAPAMAAAWAEMARLADLMSRYRVGSQVHALQLAAGVQPVKVAPEMLRVLGMANRMSRR CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH SAGAFDITVGAFAGWNFDPAHPAMPDQAEIARELPLVNYRDVVVDPRAETAFLRRQGMRI CCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCEE DLGGIAKLPVLQAGMDVLRQHGLDGAMINGGGDVLVSGALQGRAWRIGVRDPLAPARLTG ECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCEEEECCCCCCCCHHHEE VIAMHDGLVAASGDYERCFMQAGRRYHHILDPGTGMPSAGPHGVTLVARGVDDINGLGAA EEEECCCEEEECCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCEE IMVAGETAGRHWLEALPGVDAMIVGPGGRRWLSAGMAGRLIG EEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCC >Mature Secondary Structure MNASRPDRPNPGRRRLLCAWPLLATGLWIRPALADPRVAQSSRTLMGTRVDITVQARHAD CCCCCCCCCCCCCCEEEEECHHHHCCCEEECCCCCCCHHCCCCEEEEEEEEEEEEECCCC TAAPAMAAAWAEMARLADLMSRYRVGSQVHALQLAAGVQPVKVAPEMLRVLGMANRMSRR CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH SAGAFDITVGAFAGWNFDPAHPAMPDQAEIARELPLVNYRDVVVDPRAETAFLRRQGMRI CCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCEE DLGGIAKLPVLQAGMDVLRQHGLDGAMINGGGDVLVSGALQGRAWRIGVRDPLAPARLTG ECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCEEEECCCCCCCCHHHEE VIAMHDGLVAASGDYERCFMQAGRRYHHILDPGTGMPSAGPHGVTLVARGVDDINGLGAA EEEECCCEEEECCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCEE IMVAGETAGRHWLEALPGVDAMIVGPGGRRWLSAGMAGRLIG EEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]