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The map label for this gene is nosC

Identifier: 38637914

GI number: 38637914

Start: 270003

End: 270401

Strand: Direct

Name: nosC

Synonym: PHG253

Alternate gene names: NA

Gene position: 270003-270401 (Clockwise)

Preceding gene: 38637907

Following gene: 38637915

Centisome position: 59.71

GC content: 69.17

Gene sequence:

>399_bases
ATGAGCAAGAGGAAGATCGTGGTATTGGGCATGGGCATCATCGTTCAGGCACTGGTCGCCTGCGGCAAGCAGACACCGGC
CGAGCCCGCGGCGGCGGCCCCCGCACCAGAGCCGGCAGCAGCAGTGGCCGCCGCCGCGCCCGTGAACGAGCTGGGCAAGT
CGGTGTATGGCAAGACCTGCGCGATGTGCCATGCGGCCGGCGTGGCCGGCGCACCCAAGCCGGGCAACAAGGACGACTGG
GGCCCGCGCATCGCGCAGGGCAACGACACGCTCTACAAGCACGCGCTCGAAGGCTTCACCGGCAGCAAGGGCATGATGCC
GGCGCGCGGCGGCAGTACCTCGCTGCAGGACGGCGACGTCAAGGCCGCCGTCGACTTCATGGTGGCGCAATCGCACTGA

Upstream 100 bases:

>100_bases
GCAACAAAACAAGTAGAAAAATGCATGAATAAGGCCGGCACCGTGCAACCACTGCACGCCTCTGCTTCTTAGAATGGATG
CCACACAAACGGAGCATCTG

Downstream 100 bases:

>100_bases
CGCATCGACATGAACGCTTCCCGTCCTGACAGGCCGAACCCGGGACGGCGGCGGCTGCTGTGCGCATGGCCGCTGCTTGC
CACGGGCTTATGGATCCGGC

Product: putative cytochrome c-type protein

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSKRKIVVLGMGIIVQALVACGKQTPAEPAAAAPAPEPAAAVAAAAPVNELGKSVYGKTCAMCHAAGVAGAPKPGNKDDW
GPRIAQGNDTLYKHALEGFTGSKGMMPARGGSTSLQDGDVKAAVDFMVAQSH

Sequences:

>Translated_132_residues
MSKRKIVVLGMGIIVQALVACGKQTPAEPAAAAPAPEPAAAVAAAAPVNELGKSVYGKTCAMCHAAGVAGAPKPGNKDDW
GPRIAQGNDTLYKHALEGFTGSKGMMPARGGSTSLQDGDVKAAVDFMVAQSH
>Mature_131_residues
SKRKIVVLGMGIIVQALVACGKQTPAEPAAAAPAPEPAAAVAAAAPVNELGKSVYGKTCAMCHAAGVAGAPKPGNKDDWG
PRIAQGNDTLYKHALEGFTGSKGMMPARGGSTSLQDGDVKAAVDFMVAQSH

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13255; Mature: 13124

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRKIVVLGMGIIVQALVACGKQTPAEPAAAAPAPEPAAAVAAAAPVNELGKSVYGKTC
CCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH
AMCHAAGVAGAPKPGNKDDWGPRIAQGNDTLYKHALEGFTGSKGMMPARGGSTSLQDGDV
HHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
KAAVDFMVAQSH
HHHHHHHHHCCC
>Mature Secondary Structure 
SKRKIVVLGMGIIVQALVACGKQTPAEPAAAAPAPEPAAAVAAAAPVNELGKSVYGKTC
CCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH
AMCHAAGVAGAPKPGNKDDWGPRIAQGNDTLYKHALEGFTGSKGMMPARGGSTSLQDGDV
HHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
KAAVDFMVAQSH
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]