| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637854
Identifier: 38637854
GI number: 38637854
Start: 213179
End: 213793
Strand: Direct
Name: 38637854
Synonym: PHG190
Alternate gene names: NA
Gene position: 213179-213793 (Clockwise)
Preceding gene: 38637853
Following gene: 38637855
Centisome position: 47.15
GC content: 60.0
Gene sequence:
>615_bases ATGAACCCACACTACTCTGCCTTCATCGAGTTGGGCAAGGCACTCGTCCGTGAAAAGAGCCTGCAGTGGGACATACCTTT GGACAGCCTGGCGGAGGATCTTGACCAGATCGAAATTCCACAGGACGTCGAGATCCTGCTCGGCGAAAAAGCCGGCACGG TTGCCCGGCTCATCAAGGGTGGCAAGGCCAGCGGTCCGATCGTCGATGCCTTCCGGCGCATCCAGAAAACGGAAGGTGAC GCGGCCGCATACGAGTACCTGCGTGCCGAAGCAGACGGATTCCATGCTACCCCTTATGGGCACTGCCTGAACTCATTCAC GGTCGATCCGTGCGCCAAGCATCTGGAATGCTTCGCCGACTGTCGCCACCTCTCGGCCACTGACCTGCCAGAGCACAGGC GGAATCTGATTCGGCTCGAGGGCCAGCTCAAGCTTGCCGTGGAAACGATCAAGGCCCGCCCATCGACCAGCATTGGTTGG AAAAACCAGCTCGACCACGCGGAAAAGCGGCTCGCTGGGGTGCAAGGGCTGCTCCAAACGCAGCCGGGCAAGCGTCCCTT CCCCGATGGCATTGACCTCTCCTTGCCCCGACGACGGGGAGTACTTGATGAATAA
Upstream 100 bases:
>100_bases AGAGTTCCCGTGGTGATGCCCGATCGCCGGCCTACCTGCAACTGCAGCGCACGATCGCCGAAATACAGGCGGTCATCGAC CAGTTGGAAGGCGAGCGCCG
Downstream 100 bases:
>100_bases AACCAATGAAGTGTCGTCGGCCGACGACGGGAAAATGCGTGAGATCCTTGAGGTGTTGCTGACCGACGACGAGGACATCA CGGCGCGCGCCGTCGCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MNPHYSAFIELGKALVREKSLQWDIPLDSLAEDLDQIEIPQDVEILLGEKAGTVARLIKGGKASGPIVDAFRRIQKTEGD AAAYEYLRAEADGFHATPYGHCLNSFTVDPCAKHLECFADCRHLSATDLPEHRRNLIRLEGQLKLAVETIKARPSTSIGW KNQLDHAEKRLAGVQGLLQTQPGKRPFPDGIDLSLPRRRGVLDE
Sequences:
>Translated_204_residues MNPHYSAFIELGKALVREKSLQWDIPLDSLAEDLDQIEIPQDVEILLGEKAGTVARLIKGGKASGPIVDAFRRIQKTEGD AAAYEYLRAEADGFHATPYGHCLNSFTVDPCAKHLECFADCRHLSATDLPEHRRNLIRLEGQLKLAVETIKARPSTSIGW KNQLDHAEKRLAGVQGLLQTQPGKRPFPDGIDLSLPRRRGVLDE >Mature_204_residues MNPHYSAFIELGKALVREKSLQWDIPLDSLAEDLDQIEIPQDVEILLGEKAGTVARLIKGGKASGPIVDAFRRIQKTEGD AAAYEYLRAEADGFHATPYGHCLNSFTVDPCAKHLECFADCRHLSATDLPEHRRNLIRLEGQLKLAVETIKARPSTSIGW KNQLDHAEKRLAGVQGLLQTQPGKRPFPDGIDLSLPRRRGVLDE
Specific function: Unknown
COG id: COG4688
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22656; Mature: 22656
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPHYSAFIELGKALVREKSLQWDIPLDSLAEDLDQIEIPQDVEILLGEKAGTVARLIKG CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHC GKASGPIVDAFRRIQKTEGDAAAYEYLRAEADGFHATPYGHCLNSFTVDPCAKHLECFAD CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH CRHLSATDLPEHRRNLIRLEGQLKLAVETIKARPSTSIGWKNQLDHAEKRLAGVQGLLQT HHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC QPGKRPFPDGIDLSLPRRRGVLDE CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNPHYSAFIELGKALVREKSLQWDIPLDSLAEDLDQIEIPQDVEILLGEKAGTVARLIKG CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHC GKASGPIVDAFRRIQKTEGDAAAYEYLRAEADGFHATPYGHCLNSFTVDPCAKHLECFAD CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH CRHLSATDLPEHRRNLIRLEGQLKLAVETIKARPSTSIGWKNQLDHAEKRLAGVQGLLQT HHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC QPGKRPFPDGIDLSLPRRRGVLDE CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA