Definition Cupriavidus necator megaplasmid pHG1, complete sequence.
Accession NC_005241
Length 452,156

Click here to switch to the map view.

The map label for this gene is 38637854

Identifier: 38637854

GI number: 38637854

Start: 213179

End: 213793

Strand: Direct

Name: 38637854

Synonym: PHG190

Alternate gene names: NA

Gene position: 213179-213793 (Clockwise)

Preceding gene: 38637853

Following gene: 38637855

Centisome position: 47.15

GC content: 60.0

Gene sequence:

>615_bases
ATGAACCCACACTACTCTGCCTTCATCGAGTTGGGCAAGGCACTCGTCCGTGAAAAGAGCCTGCAGTGGGACATACCTTT
GGACAGCCTGGCGGAGGATCTTGACCAGATCGAAATTCCACAGGACGTCGAGATCCTGCTCGGCGAAAAAGCCGGCACGG
TTGCCCGGCTCATCAAGGGTGGCAAGGCCAGCGGTCCGATCGTCGATGCCTTCCGGCGCATCCAGAAAACGGAAGGTGAC
GCGGCCGCATACGAGTACCTGCGTGCCGAAGCAGACGGATTCCATGCTACCCCTTATGGGCACTGCCTGAACTCATTCAC
GGTCGATCCGTGCGCCAAGCATCTGGAATGCTTCGCCGACTGTCGCCACCTCTCGGCCACTGACCTGCCAGAGCACAGGC
GGAATCTGATTCGGCTCGAGGGCCAGCTCAAGCTTGCCGTGGAAACGATCAAGGCCCGCCCATCGACCAGCATTGGTTGG
AAAAACCAGCTCGACCACGCGGAAAAGCGGCTCGCTGGGGTGCAAGGGCTGCTCCAAACGCAGCCGGGCAAGCGTCCCTT
CCCCGATGGCATTGACCTCTCCTTGCCCCGACGACGGGGAGTACTTGATGAATAA

Upstream 100 bases:

>100_bases
AGAGTTCCCGTGGTGATGCCCGATCGCCGGCCTACCTGCAACTGCAGCGCACGATCGCCGAAATACAGGCGGTCATCGAC
CAGTTGGAAGGCGAGCGCCG

Downstream 100 bases:

>100_bases
AACCAATGAAGTGTCGTCGGCCGACGACGGGAAAATGCGTGAGATCCTTGAGGTGTTGCTGACCGACGACGAGGACATCA
CGGCGCGCGCCGTCGCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNPHYSAFIELGKALVREKSLQWDIPLDSLAEDLDQIEIPQDVEILLGEKAGTVARLIKGGKASGPIVDAFRRIQKTEGD
AAAYEYLRAEADGFHATPYGHCLNSFTVDPCAKHLECFADCRHLSATDLPEHRRNLIRLEGQLKLAVETIKARPSTSIGW
KNQLDHAEKRLAGVQGLLQTQPGKRPFPDGIDLSLPRRRGVLDE

Sequences:

>Translated_204_residues
MNPHYSAFIELGKALVREKSLQWDIPLDSLAEDLDQIEIPQDVEILLGEKAGTVARLIKGGKASGPIVDAFRRIQKTEGD
AAAYEYLRAEADGFHATPYGHCLNSFTVDPCAKHLECFADCRHLSATDLPEHRRNLIRLEGQLKLAVETIKARPSTSIGW
KNQLDHAEKRLAGVQGLLQTQPGKRPFPDGIDLSLPRRRGVLDE
>Mature_204_residues
MNPHYSAFIELGKALVREKSLQWDIPLDSLAEDLDQIEIPQDVEILLGEKAGTVARLIKGGKASGPIVDAFRRIQKTEGD
AAAYEYLRAEADGFHATPYGHCLNSFTVDPCAKHLECFADCRHLSATDLPEHRRNLIRLEGQLKLAVETIKARPSTSIGW
KNQLDHAEKRLAGVQGLLQTQPGKRPFPDGIDLSLPRRRGVLDE

Specific function: Unknown

COG id: COG4688

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22656; Mature: 22656

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPHYSAFIELGKALVREKSLQWDIPLDSLAEDLDQIEIPQDVEILLGEKAGTVARLIKG
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHC
GKASGPIVDAFRRIQKTEGDAAAYEYLRAEADGFHATPYGHCLNSFTVDPCAKHLECFAD
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH
CRHLSATDLPEHRRNLIRLEGQLKLAVETIKARPSTSIGWKNQLDHAEKRLAGVQGLLQT
HHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
QPGKRPFPDGIDLSLPRRRGVLDE
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNPHYSAFIELGKALVREKSLQWDIPLDSLAEDLDQIEIPQDVEILLGEKAGTVARLIKG
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHC
GKASGPIVDAFRRIQKTEGDAAAYEYLRAEADGFHATPYGHCLNSFTVDPCAKHLECFAD
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH
CRHLSATDLPEHRRNLIRLEGQLKLAVETIKARPSTSIGWKNQLDHAEKRLAGVQGLLQT
HHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
QPGKRPFPDGIDLSLPRRRGVLDE
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA