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The map label for this gene is 38637853

Identifier: 38637853

GI number: 38637853

Start: 211833

End: 213182

Strand: Direct

Name: 38637853

Synonym: PHG189

Alternate gene names: NA

Gene position: 211833-213182 (Clockwise)

Preceding gene: 38637852

Following gene: 38637854

Centisome position: 46.85

GC content: 61.41

Gene sequence:

>1350_bases
ATGGGCCGGCTCGACTTCGGCCGGTATCCTGCTGTCTATGGCGCTCTGCAGAAGCATCTACTGGTCTTCCTGCTGGGCGA
AGACGTGCATATCTCGACCTGCTTCAATGTATTGAGCGCAGCAATGCATCTCGAGGTGCATGACGTCGACCGCGTTGTTG
CAGCCGGCCCAACCCGCATAGCAACGATATGGATGGCGCTGCGCGCCTGTCAGTTGCCGGTTCATGCCTATCGTTTCGTT
AAGACGGTTCTGCGGCTGCTATGCAGGCATCGCCTGCACGGGTGGTCCGAGTCGTATCTGACCTATGTCAGCGCCGCCCT
GCCCGGCCCCGCGTCGGACTCATATGCTGGTGTGCGGTCAGGGGATGTCTTCCTGAGCGCTGATGAAGAAGCTGTGATCG
TTCGCTACCTGGACGAAACATCGGATCTCGTGAGGACCCGAGGCTGGTCAGGCGTCGCGCATGACAAGCTTTGCGAGGCC
GCGATGGTGCTCTGTTCCTATCAGTTCGCCATGCGCCCCATTCAGGTCGCGATGCTGACGAGGCGTGATGTACGGGTCTG
GCAGCCAGAACCCGGCGGCGAACCGGCTGTTCACCTCACGTTCGTCATGGTCAAGCAACGGGGACGGCTTCGCAAAAGGC
CGATGGTCCGTCGTGTGAAACAAGAGTGGGCGGTGCTGTTCACGGCCCCGGTGGCACATGCAGACTTGCACGGTCGCGAC
GCGAGCGATCGCGTCTTCGACGTCAGATCCAATCGTGAAGCCGGCTCTCGCATTGCCCGCTGCGTGGAACGCCTCATCGG
GGATGACGCTTGCGCGATGGACCTTCGCCATACGGCAGCCCAACGCCTTGTTGACGCTGGTGCAAGCCACGAGGAGCTCG
CCGAGTTCATGGGACATTCCGATGTACGGACCGGGCTGGTGTACTTTGCGGCGTCAGCCTCTCACGCGGAACGGGTCAAC
CGGGCACTCGGCGCGTCAGAGATATACCGGCGGGTGGCAAAGATCGCGCACGACCGGTTCATCTCCCCGGAAGAACTCAC
CCAGCTCAAGGGAGAACAGCAGATCGCCGGCGTGCCTCACGGCATCCCGATCGCCGGCATCGGCGGCTGCACGTCGGGGC
AACCAGCCTGCCCTTACAACCCGGTGACGTCGTGCTATGGGTGCAGGAAGTTTATGCCTTTGCACGACAAAACGATGCAC
GAAAGTGTATTGGCCGCAATGCGTGAAGTAGTCTCGCTCTTCGAGCAGAGTTCCCGTGGTGATGCCCGATCGCCGGCCTA
CCTGCAACTGCAGCGCACGATCGCCGAAATACAGGCGGTCATCGACCAGTTGGAAGGCGAGCGCCGATGA

Upstream 100 bases:

>100_bases
ACCGCCCGTTGTACGCTACTACGACGACTTCGACGACAAACTCCGCTCCATTCCGGCAGTCGGTCAGACAGATGTCTTTG
GGCTTCACCTCAATGGTCGG

Downstream 100 bases:

>100_bases
ACCCACACTACTCTGCCTTCATCGAGTTGGGCAAGGCACTCGTCCGTGAAAAGAGCCTGCAGTGGGACATACCTTTGGAC
AGCCTGGCGGAGGATCTTGA

Product: putative phage-type integrase

Products: NA

Alternate protein names: Phage-Type Integrase; Integrase Family Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MGRLDFGRYPAVYGALQKHLLVFLLGEDVHISTCFNVLSAAMHLEVHDVDRVVAAGPTRIATIWMALRACQLPVHAYRFV
KTVLRLLCRHRLHGWSESYLTYVSAALPGPASDSYAGVRSGDVFLSADEEAVIVRYLDETSDLVRTRGWSGVAHDKLCEA
AMVLCSYQFAMRPIQVAMLTRRDVRVWQPEPGGEPAVHLTFVMVKQRGRLRKRPMVRRVKQEWAVLFTAPVAHADLHGRD
ASDRVFDVRSNREAGSRIARCVERLIGDDACAMDLRHTAAQRLVDAGASHEELAEFMGHSDVRTGLVYFAASASHAERVN
RALGASEIYRRVAKIAHDRFISPEELTQLKGEQQIAGVPHGIPIAGIGGCTSGQPACPYNPVTSCYGCRKFMPLHDKTMH
ESVLAAMREVVSLFEQSSRGDARSPAYLQLQRTIAEIQAVIDQLEGERR

Sequences:

>Translated_449_residues
MGRLDFGRYPAVYGALQKHLLVFLLGEDVHISTCFNVLSAAMHLEVHDVDRVVAAGPTRIATIWMALRACQLPVHAYRFV
KTVLRLLCRHRLHGWSESYLTYVSAALPGPASDSYAGVRSGDVFLSADEEAVIVRYLDETSDLVRTRGWSGVAHDKLCEA
AMVLCSYQFAMRPIQVAMLTRRDVRVWQPEPGGEPAVHLTFVMVKQRGRLRKRPMVRRVKQEWAVLFTAPVAHADLHGRD
ASDRVFDVRSNREAGSRIARCVERLIGDDACAMDLRHTAAQRLVDAGASHEELAEFMGHSDVRTGLVYFAASASHAERVN
RALGASEIYRRVAKIAHDRFISPEELTQLKGEQQIAGVPHGIPIAGIGGCTSGQPACPYNPVTSCYGCRKFMPLHDKTMH
ESVLAAMREVVSLFEQSSRGDARSPAYLQLQRTIAEIQAVIDQLEGERR
>Mature_448_residues
GRLDFGRYPAVYGALQKHLLVFLLGEDVHISTCFNVLSAAMHLEVHDVDRVVAAGPTRIATIWMALRACQLPVHAYRFVK
TVLRLLCRHRLHGWSESYLTYVSAALPGPASDSYAGVRSGDVFLSADEEAVIVRYLDETSDLVRTRGWSGVAHDKLCEAA
MVLCSYQFAMRPIQVAMLTRRDVRVWQPEPGGEPAVHLTFVMVKQRGRLRKRPMVRRVKQEWAVLFTAPVAHADLHGRDA
SDRVFDVRSNREAGSRIARCVERLIGDDACAMDLRHTAAQRLVDAGASHEELAEFMGHSDVRTGLVYFAASASHAERVNR
ALGASEIYRRVAKIAHDRFISPEELTQLKGEQQIAGVPHGIPIAGIGGCTSGQPACPYNPVTSCYGCRKFMPLHDKTMHE
SVLAAMREVVSLFEQSSRGDARSPAYLQLQRTIAEIQAVIDQLEGERR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49892; Mature: 49761

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLDFGRYPAVYGALQKHLLVFLLGEDVHISTCFNVLSAAMHLEVHDVDRVVAAGPTRI
CCCCCCCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ATIWMALRACQLPVHAYRFVKTVLRLLCRHRLHGWSESYLTYVSAALPGPASDSYAGVRS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
GDVFLSADEEAVIVRYLDETSDLVRTRGWSGVAHDKLCEAAMVLCSYQFAMRPIQVAMLT
CCEEEECCCCEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDVRVWQPEPGGEPAVHLTFVMVKQRGRLRKRPMVRRVKQEWAVLFTAPVAHADLHGRD
HCCCEEECCCCCCCCCEEHHHHHHHHHCHHHCCHHHHHHHHHHHEEEECCHHHCCCCCCC
ASDRVFDVRSNREAGSRIARCVERLIGDDACAMDLRHTAAQRLVDAGASHEELAEFMGHS
CCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
DVRTGLVYFAASASHAERVNRALGASEIYRRVAKIAHDRFISPEELTQLKGEQQIAGVPH
HHHHHHHHEECCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCC
GIPIAGIGGCTSGQPACPYNPVTSCYGCRKFMPLHDKTMHESVLAAMREVVSLFEQSSRG
CCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DARSPAYLQLQRTIAEIQAVIDQLEGERR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GRLDFGRYPAVYGALQKHLLVFLLGEDVHISTCFNVLSAAMHLEVHDVDRVVAAGPTRI
CCCCCCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ATIWMALRACQLPVHAYRFVKTVLRLLCRHRLHGWSESYLTYVSAALPGPASDSYAGVRS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
GDVFLSADEEAVIVRYLDETSDLVRTRGWSGVAHDKLCEAAMVLCSYQFAMRPIQVAMLT
CCEEEECCCCEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDVRVWQPEPGGEPAVHLTFVMVKQRGRLRKRPMVRRVKQEWAVLFTAPVAHADLHGRD
HCCCEEECCCCCCCCCEEHHHHHHHHHCHHHCCHHHHHHHHHHHEEEECCHHHCCCCCCC
ASDRVFDVRSNREAGSRIARCVERLIGDDACAMDLRHTAAQRLVDAGASHEELAEFMGHS
CCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
DVRTGLVYFAASASHAERVNRALGASEIYRRVAKIAHDRFISPEELTQLKGEQQIAGVPH
HHHHHHHHEECCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCC
GIPIAGIGGCTSGQPACPYNPVTSCYGCRKFMPLHDKTMHESVLAAMREVVSLFEQSSRG
CCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DARSPAYLQLQRTIAEIQAVIDQLEGERR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA