| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is mrr
Identifier: 38637834
GI number: 38637834
Start: 183573
End: 184517
Strand: Direct
Name: mrr
Synonym: PHG170
Alternate gene names: NA
Gene position: 183573-184517 (Clockwise)
Preceding gene: 38637827
Following gene: 38637835
Centisome position: 40.6
GC content: 60.42
Gene sequence:
>945_bases ATGGGTCGCCGAAGGAAGGAGCCGTCGCTTAGCGAAATATTGATGGATGCGCCATGGTGGGTATCCGCAGCACTGGCCCT GGGTGCTTTCATTGTGTTTCGCGGGGTCGTGCCAGGGATATTCGCGTCGAGCCCATTGTTGACGGGCATTGCCGTGCTAA GCCAGTCATTAGCCTGGGTTCCCGCCGCCATGTTCGGCTTCCTGGGTGTGCTGTCATACATCCGTGCGCGGGGTAGGGCG GGGGCCAGGCAGCAAGAAATCCCGATGAGGGCTCGGCGCTCCCGCACGAGCCGGCCGTCGTCGGCCCCCGTGTCACCCCG GTATTCCGATGAATCCGCCGAGTCGAAGGAGGCCGTTAGCCCGCTGGCGAGGACAGCATCCGTACCTGAGAAGCCAGAGA TCAATAGCTGGACGCTGGATGCCCTCAAGTTGTTAGAGTGGAAGCGATTTGAGCTGCTTTGTGTTGGGTACTACGAGGCG ATGGGGTTCGTGGTCAAGACTGTGCCCCATGGTCCCGATGGCGGCATCGATGCAACCTTGTACAAGGCAGGCCTGGATGT TCCCGTGGCCGTGGTCCAATGCAAAGCATGGAGTAAGCCGGTGAAGGTGGAGCAGGTCCGCGCACTTGCCGGTGTCATGC ACGAACACAAGGTGCGTAGGGGCGTTTTCTGGTCGTTGTCTGGCTATGTAGGGCGACCGGTAAAGGAGTCGGCAGAGCGA GCGGGCATTCAATTACTTGATGGTGCGGGCATCCTGGAACGGATCTGCGCGCTCGATCAGTACAAGCAAGCGACGTTGCT GAAGCAGGCGTTTCGCGGCGACTACCGGACGCCTACATGCGCGGCCTGCGGAATCAAGATGGTTGAGCGGCAAGGGTCAG CCGGCGCATTCTGGGGTTGCCAAAACTATCCCGGTTGCAAGGTCAGACTGTCCCGCAACGTCTAG
Upstream 100 bases:
>100_bases GTGTTGGCTTGCTGCAACCCGTCTTGCATATCAGATCGGGTAGATTTGCCGACGGCGGGATTCCGCGCCAATGAGATGAA GAACAACAACAGGTAGAGAA
Downstream 100 bases:
>100_bases TCTAGGAACCGGCTCGATCAATCATCGCCGCCGCGCTCTCAGTCAACAAGGTCACTCCCGGGGAAGGCTGGCTTTCCGGC AGGCTCGAGCGCCTATTTTC
Product: putative endonuclease
Products: NA
Alternate protein names: Endonuclease; DNA poisomerase IRestriction Endonuclease; Endonuclease Type II Restriction; DNA poisomerase Type IA Zn Finger Domain Protein; DNA Restriction; Mrr Restriction System Protein; DNA poisomerase I Restriction Endonuclease; Transmembrane Protein
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MGRRRKEPSLSEILMDAPWWVSAALALGAFIVFRGVVPGIFASSPLLTGIAVLSQSLAWVPAAMFGFLGVLSYIRARGRA GARQQEIPMRARRSRTSRPSSAPVSPRYSDESAESKEAVSPLARTASVPEKPEINSWTLDALKLLEWKRFELLCVGYYEA MGFVVKTVPHGPDGGIDATLYKAGLDVPVAVVQCKAWSKPVKVEQVRALAGVMHEHKVRRGVFWSLSGYVGRPVKESAER AGIQLLDGAGILERICALDQYKQATLLKQAFRGDYRTPTCAACGIKMVERQGSAGAFWGCQNYPGCKVRLSRNV
Sequences:
>Translated_314_residues MGRRRKEPSLSEILMDAPWWVSAALALGAFIVFRGVVPGIFASSPLLTGIAVLSQSLAWVPAAMFGFLGVLSYIRARGRA GARQQEIPMRARRSRTSRPSSAPVSPRYSDESAESKEAVSPLARTASVPEKPEINSWTLDALKLLEWKRFELLCVGYYEA MGFVVKTVPHGPDGGIDATLYKAGLDVPVAVVQCKAWSKPVKVEQVRALAGVMHEHKVRRGVFWSLSGYVGRPVKESAER AGIQLLDGAGILERICALDQYKQATLLKQAFRGDYRTPTCAACGIKMVERQGSAGAFWGCQNYPGCKVRLSRNV >Mature_313_residues GRRRKEPSLSEILMDAPWWVSAALALGAFIVFRGVVPGIFASSPLLTGIAVLSQSLAWVPAAMFGFLGVLSYIRARGRAG ARQQEIPMRARRSRTSRPSSAPVSPRYSDESAESKEAVSPLARTASVPEKPEINSWTLDALKLLEWKRFELLCVGYYEAM GFVVKTVPHGPDGGIDATLYKAGLDVPVAVVQCKAWSKPVKVEQVRALAGVMHEHKVRRGVFWSLSGYVGRPVKESAERA GIQLLDGAGILERICALDQYKQATLLKQAFRGDYRTPTCAACGIKMVERQGSAGAFWGCQNYPGCKVRLSRNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34311; Mature: 34180
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRRKEPSLSEILMDAPWWVSAALALGAFIVFRGVVPGIFASSPLLTGIAVLSQSLAWV CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH PAAMFGFLGVLSYIRARGRAGARQQEIPMRARRSRTSRPSSAPVSPRYSDESAESKEAVS HHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH PLARTASVPEKPEINSWTLDALKLLEWKRFELLCVGYYEAMGFVVKTVPHGPDGGIDATL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHCCCCCCCCCCCHHH YKAGLDVPVAVVQCKAWSKPVKVEQVRALAGVMHEHKVRRGVFWSLSGYVGRPVKESAER HHCCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHH AGIQLLDGAGILERICALDQYKQATLLKQAFRGDYRTPTCAACGIKMVERQGSAGAFWGC CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC QNYPGCKVRLSRNV CCCCCCEEEECCCC >Mature Secondary Structure GRRRKEPSLSEILMDAPWWVSAALALGAFIVFRGVVPGIFASSPLLTGIAVLSQSLAWV CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH PAAMFGFLGVLSYIRARGRAGARQQEIPMRARRSRTSRPSSAPVSPRYSDESAESKEAVS HHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH PLARTASVPEKPEINSWTLDALKLLEWKRFELLCVGYYEAMGFVVKTVPHGPDGGIDATL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHCCCCCCCCCCCHHH YKAGLDVPVAVVQCKAWSKPVKVEQVRALAGVMHEHKVRRGVFWSLSGYVGRPVKESAER HHCCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHH AGIQLLDGAGILERICALDQYKQATLLKQAFRGDYRTPTCAACGIKMVERQGSAGAFWGC CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC QNYPGCKVRLSRNV CCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA