Definition Cupriavidus necator megaplasmid pHG1, complete sequence.
Accession NC_005241
Length 452,156

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The map label for this gene is 38637827

Identifier: 38637827

GI number: 38637827

Start: 166940

End: 168394

Strand: Direct

Name: 38637827

Synonym: PHG163

Alternate gene names: NA

Gene position: 166940-168394 (Clockwise)

Preceding gene: 38637826

Following gene: 38637834

Centisome position: 36.92

GC content: 59.24

Gene sequence:

>1455_bases
ATGCAGGGTTTACCGGTCTCGCCCTCGCTCATTCCTCTCGACACCCTGAGGGAACAGATCGCACGGGCCGTTGCCACGGC
CAAGGCCTACGACGTTCCCGATGTCTGTGTCGGCCTGAGGATTCAGCAGTCGGTGGACGAGGCCGATGCGCAGGAGGCTT
TCGGCAGCAAACGGCTGTACGTCCGACGCAGGATCATCTCCTGGAGCGAGGCGGACCTTTTAGACTTGGCAACGCGGGTG
CTACGCGATTACCCCTCGGAGGAACTTGCGGACATCGTGAGCGAGATGACCGTCCATGCAGAACAGCGCGTAAGTGCATT
GGTCCGGCGTGACGTTCTCAAGGCTCTCAATCCCTTGGCCTCCCTGTTCGGCGACCTACCGCTGATTGATGGACTCAGAG
TGGTGTTCGGTGCCTCGGTCATCCAGGACGATCCGACAGGGCTGACTGGTCTGCTTGGCCTTACCAGCCTGCATGGGCAG
ATTGTCCAGCACTGCTTACGCAACGATGACTGGTCCCATGAAGAGCTGCTGATTCAATGCGGCGCGATGACGTGCAGCCA
GACCCGCTTCTTTTCGTTGCTGAACAAGCTTTTGCATCCCATGTCACGCCGTGACGGCGAGCAGGCGACACTAGCCACCG
CGATCGACACGGCACTCAGGCGGGACGGCTTCGCGGTTAGGAAGACCAGCGTGGAGTCGGGGTACGCCGTCTATGGCGTG
GTCCGCATGCAGGCAGGTGTCGTCGGAGCAATGAAGAACCTGATCTTCGCATCAATCGGTGAGAAGCCAGAATTGGTCTT
TCGCGACGCAGTCAATAACGACGTCGAGATCATCAAGCATGCCGACAAAGTACTGGTCTTTGACCGCCCTTTACCCAATT
CCGGACTGCTGCTCTGGAAGGACTTGCGCGACTGGTATGCCGAACTTCAGGGTATTAGCGACGTGGCCAGTGCGAAAGAG
AATCTTTTCCGGCGGCTGCGCCAGGCTGTGCTCGGTGCCCGTTCGGCGGGTGAGTTTGCGGTATTTCAAGGCTACTACGA
GCGCTACGGTGGTCCGCTTGGAGAGCGGTTGCCCGCGCTTGTCCCGCAGGTCTATCTGCACTACGACCCCTACACCCGTC
GCCAACGCGGCGACGAACAGTTTTTAGCGCGCCAGCGTATGGATTTTCTGCTGATGCTGGATCACGGCGTGCGCATCGTG
ATCGAGATCGATGGCCGCCACCACTACGCAGTACCGGATCCTCTAGCGCCGGATCGGTTCATCGCAAACTCCCAGCGCTA
TGCCGAGATGGTGGCGGAAGATCGTCGGCTGCGGCTTATGGGGTACGAGGTCTACCGCTTCGGCGGTTACGAATTCTTGG
ACGTTGACCTGGAACAGCGCAGGGTTGGTCCACACGCTCAAAAATGCGTCGCGGACTTCTTTGACAGGCTTTTGGCCCGG
CATTGTGTTAGGTGA

Upstream 100 bases:

>100_bases
TGGCCCGCTCTGGGTGAGCGCTGGCGTGGCTGGCGGCTTCAAAACCAGATTCGCTTTGAATGCTGTCAAAATACGGACAA
CGAAACGCCGTGGAGCAGCA

Downstream 100 bases:

>100_bases
TTAGCATTGTGTGAGGCGACATACCATTTGAAGAGACCAACTACACAAGCGCTGGCAATGGCAGATCCCCGCATGATTTT
TTAGTTCAGTGAGCGAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MQGLPVSPSLIPLDTLREQIARAVATAKAYDVPDVCVGLRIQQSVDEADAQEAFGSKRLYVRRRIISWSEADLLDLATRV
LRDYPSEELADIVSEMTVHAEQRVSALVRRDVLKALNPLASLFGDLPLIDGLRVVFGASVIQDDPTGLTGLLGLTSLHGQ
IVQHCLRNDDWSHEELLIQCGAMTCSQTRFFSLLNKLLHPMSRRDGEQATLATAIDTALRRDGFAVRKTSVESGYAVYGV
VRMQAGVVGAMKNLIFASIGEKPELVFRDAVNNDVEIIKHADKVLVFDRPLPNSGLLLWKDLRDWYAELQGISDVASAKE
NLFRRLRQAVLGARSAGEFAVFQGYYERYGGPLGERLPALVPQVYLHYDPYTRRQRGDEQFLARQRMDFLLMLDHGVRIV
IEIDGRHHYAVPDPLAPDRFIANSQRYAEMVAEDRRLRLMGYEVYRFGGYEFLDVDLEQRRVGPHAQKCVADFFDRLLAR
HCVR

Sequences:

>Translated_484_residues
MQGLPVSPSLIPLDTLREQIARAVATAKAYDVPDVCVGLRIQQSVDEADAQEAFGSKRLYVRRRIISWSEADLLDLATRV
LRDYPSEELADIVSEMTVHAEQRVSALVRRDVLKALNPLASLFGDLPLIDGLRVVFGASVIQDDPTGLTGLLGLTSLHGQ
IVQHCLRNDDWSHEELLIQCGAMTCSQTRFFSLLNKLLHPMSRRDGEQATLATAIDTALRRDGFAVRKTSVESGYAVYGV
VRMQAGVVGAMKNLIFASIGEKPELVFRDAVNNDVEIIKHADKVLVFDRPLPNSGLLLWKDLRDWYAELQGISDVASAKE
NLFRRLRQAVLGARSAGEFAVFQGYYERYGGPLGERLPALVPQVYLHYDPYTRRQRGDEQFLARQRMDFLLMLDHGVRIV
IEIDGRHHYAVPDPLAPDRFIANSQRYAEMVAEDRRLRLMGYEVYRFGGYEFLDVDLEQRRVGPHAQKCVADFFDRLLAR
HCVR
>Mature_484_residues
MQGLPVSPSLIPLDTLREQIARAVATAKAYDVPDVCVGLRIQQSVDEADAQEAFGSKRLYVRRRIISWSEADLLDLATRV
LRDYPSEELADIVSEMTVHAEQRVSALVRRDVLKALNPLASLFGDLPLIDGLRVVFGASVIQDDPTGLTGLLGLTSLHGQ
IVQHCLRNDDWSHEELLIQCGAMTCSQTRFFSLLNKLLHPMSRRDGEQATLATAIDTALRRDGFAVRKTSVESGYAVYGV
VRMQAGVVGAMKNLIFASIGEKPELVFRDAVNNDVEIIKHADKVLVFDRPLPNSGLLLWKDLRDWYAELQGISDVASAKE
NLFRRLRQAVLGARSAGEFAVFQGYYERYGGPLGERLPALVPQVYLHYDPYTRRQRGDEQFLARQRMDFLLMLDHGVRIV
IEIDGRHHYAVPDPLAPDRFIANSQRYAEMVAEDRRLRLMGYEVYRFGGYEFLDVDLEQRRVGPHAQKCVADFFDRLLAR
HCVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54623; Mature: 54623

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGLPVSPSLIPLDTLREQIARAVATAKAYDVPDVCVGLRIQQSVDEADAQEAFGSKRLY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCHHHH
VRRRIISWSEADLLDLATRVLRDYPSEELADIVSEMTVHAEQRVSALVRRDVLKALNPLA
HHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFGDLPLIDGLRVVFGASVIQDDPTGLTGLLGLTSLHGQIVQHCLRNDDWSHEELLIQC
HHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GAMTCSQTRFFSLLNKLLHPMSRRDGEQATLATAIDTALRRDGFAVRKTSVESGYAVYGV
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHH
VRMQAGVVGAMKNLIFASIGEKPELVFRDAVNNDVEIIKHADKVLVFDRPLPNSGLLLWK
HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCHHHHHHCCCEEEEECCCCCCCCEEEHH
DLRDWYAELQGISDVASAKENLFRRLRQAVLGARSAGEFAVFQGYYERYGGPLGERLPAL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
VPQVYLHYDPYTRRQRGDEQFLARQRMDFLLMLDHGVRIVIEIDGRHHYAVPDPLAPDRF
HHHHHHCCCCHHHHHCCHHHHHHHHHCCEEEEECCCCEEEEEECCCEEECCCCCCCCCHH
IANSQRYAEMVAEDRRLRLMGYEVYRFGGYEFLDVDLEQRRVGPHAQKCVADFFDRLLAR
HHCHHHHHHHHHHCCCEEHCCHHHEEECCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHH
HCVR
HCCC
>Mature Secondary Structure
MQGLPVSPSLIPLDTLREQIARAVATAKAYDVPDVCVGLRIQQSVDEADAQEAFGSKRLY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCHHHH
VRRRIISWSEADLLDLATRVLRDYPSEELADIVSEMTVHAEQRVSALVRRDVLKALNPLA
HHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFGDLPLIDGLRVVFGASVIQDDPTGLTGLLGLTSLHGQIVQHCLRNDDWSHEELLIQC
HHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GAMTCSQTRFFSLLNKLLHPMSRRDGEQATLATAIDTALRRDGFAVRKTSVESGYAVYGV
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHH
VRMQAGVVGAMKNLIFASIGEKPELVFRDAVNNDVEIIKHADKVLVFDRPLPNSGLLLWK
HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCHHHHHHCCCEEEEECCCCCCCCEEEHH
DLRDWYAELQGISDVASAKENLFRRLRQAVLGARSAGEFAVFQGYYERYGGPLGERLPAL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
VPQVYLHYDPYTRRQRGDEQFLARQRMDFLLMLDHGVRIVIEIDGRHHYAVPDPLAPDRF
HHHHHHCCCCHHHHHCCHHHHHHHHHCCEEEEECCCCEEEEEECCCEEECCCCCCCCCHH
IANSQRYAEMVAEDRRLRLMGYEVYRFGGYEFLDVDLEQRRVGPHAQKCVADFFDRLLAR
HHCHHHHHHHHHHCCCEEHCCHHHEEECCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHH
HCVR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA