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The map label for this gene is xerC [C]

Identifier: 38637795

GI number: 38637795

Start: 129573

End: 130520

Strand: Direct

Name: xerC [C]

Synonym: PHG130

Alternate gene names: 38637795

Gene position: 129573-130520 (Clockwise)

Preceding gene: 38637794

Following gene: 38637798

Centisome position: 28.66

GC content: 59.39

Gene sequence:

>948_bases
ATGACTTCGATCCGTGACTCCCTCGCTCGGTACGTGGCGGTCCGCCGCGCTCTCGGGGCATCATTCTATGAACCTGCATT
GGCACTCGGTCATTTCGTTGATCTTCTGGAACATGAAGACGCAGAGTTCATTACTACCGATCTGGCTCTGCGCTGGGCGA
TGACGCCCGCACTCGTCGAACGCGCCACCTGGGGGCGGCGCCTCTCTCAAGTGAGAGGATTCGCCAGATGGATGAACGTC
ATTGACGGTCGAAACCAGATTCCTCCAGCAGGACTCCTGAGTGCCCGCAGACGGCGCAATGCCCCGCATATTTACACGGA
GCAGGAAATTGATCTGCTTATGACCCGCGCCGCTCAACTGCGATCCCGAACCGGCATGCGAGCACTGACCTATTCGACGC
TCATCGGGCTTCTTGTAGCGACGGGCCTCAGGCCAGGCGAAGCGCTTCGGCTCGACCGGTCCGACGTTGACCTCGTCAGC
GGGATACTCTCCATCCGGGAATCGAAGTTCGGCAAATCGCGCTTTGTTCCTGTAGCAGAGTCGACCCGGGTGGCACTCGA
ACACTATGCCAAGAAACGCGATCAACTCTGTCCTTCACGATTGAGCGAGGCGTTCCTGGTTAGTGAGCGCGGCAAGCGAT
TGAAGGCCGGAACTGCACGAAGCATGTTCGTCAGAATGTCGCGCGCTGTCGGTCTGCGATCGGCGACAGAGGATGGGCGC
GATGGTTACGGCCCGCGCCTCCAGGACTTCCGGCATAGCTTCGCGACGGGAAGGCTGGTCGAATGGTATCGCGCCGGTCT
GGACGTAAGTCGAGAACTGCCGAAACTTGCCGCCTACCTCGGGCATGTCAACATCGGTCTTACGTACTGGTACATCGAAG
CGGTTCCTGAGTTGCTTGAACTCGCGGCAGCCTATCTCGACAAGGACTGTCCGGGAGAACGGCCGTGA

Upstream 100 bases:

>100_bases
TGCGGCACCGCTCACCGGACAGTACCGCGATCTATGCAAAGGTCGCGTTCGAGGACCTGCGCGGGGTCGCGCGCTCGTGG
CCCACGGCGGGAGGTGCAAT

Downstream 100 bases:

>100_bases
GCGCCGCCAGCCTCCCAGCCCTGGTTCAGCGCTTCTTCACCCAGCGCCTGCTCGAGCAGCAAGGTCTGAGTTCGCATACG
GTGGCAAGTTACCGTGACAC

Product: putative integrase/recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTSIRDSLARYVAVRRALGASFYEPALALGHFVDLLEHEDAEFITTDLALRWAMTPALVERATWGRRLSQVRGFARWMNV
IDGRNQIPPAGLLSARRRRNAPHIYTEQEIDLLMTRAAQLRSRTGMRALTYSTLIGLLVATGLRPGEALRLDRSDVDLVS
GILSIRESKFGKSRFVPVAESTRVALEHYAKKRDQLCPSRLSEAFLVSERGKRLKAGTARSMFVRMSRAVGLRSATEDGR
DGYGPRLQDFRHSFATGRLVEWYRAGLDVSRELPKLAAYLGHVNIGLTYWYIEAVPELLELAAAYLDKDCPGERP

Sequences:

>Translated_315_residues
MTSIRDSLARYVAVRRALGASFYEPALALGHFVDLLEHEDAEFITTDLALRWAMTPALVERATWGRRLSQVRGFARWMNV
IDGRNQIPPAGLLSARRRRNAPHIYTEQEIDLLMTRAAQLRSRTGMRALTYSTLIGLLVATGLRPGEALRLDRSDVDLVS
GILSIRESKFGKSRFVPVAESTRVALEHYAKKRDQLCPSRLSEAFLVSERGKRLKAGTARSMFVRMSRAVGLRSATEDGR
DGYGPRLQDFRHSFATGRLVEWYRAGLDVSRELPKLAAYLGHVNIGLTYWYIEAVPELLELAAAYLDKDCPGERP
>Mature_314_residues
TSIRDSLARYVAVRRALGASFYEPALALGHFVDLLEHEDAEFITTDLALRWAMTPALVERATWGRRLSQVRGFARWMNVI
DGRNQIPPAGLLSARRRRNAPHIYTEQEIDLLMTRAAQLRSRTGMRALTYSTLIGLLVATGLRPGEALRLDRSDVDLVSG
ILSIRESKFGKSRFVPVAESTRVALEHYAKKRDQLCPSRLSEAFLVSERGKRLKAGTARSMFVRMSRAVGLRSATEDGRD
GYGPRLQDFRHSFATGRLVEWYRAGLDVSRELPKLAAYLGHVNIGLTYWYIEAVPELLELAAAYLDKDCPGERP

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 35433; Mature: 35302

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIRDSLARYVAVRRALGASFYEPALALGHFVDLLEHEDAEFITTDLALRWAMTPALVE
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RATWGRRLSQVRGFARWMNVIDGRNQIPPAGLLSARRRRNAPHIYTEQEIDLLMTRAAQL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RSRTGMRALTYSTLIGLLVATGLRPGEALRLDRSDVDLVSGILSIRESKFGKSRFVPVAE
HHHCCHHHHHHHHHHHHHHHCCCCCCHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCH
STRVALEHYAKKRDQLCPSRLSEAFLVSERGKRLKAGTARSMFVRMSRAVGLRSATEDGR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCC
DGYGPRLQDFRHSFATGRLVEWYRAGLDVSRELPKLAAYLGHVNIGLTYWYIEAVPELLE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAAYLDKDCPGERP
HHHHHHCCCCCCCCC
>Mature Secondary Structure 
TSIRDSLARYVAVRRALGASFYEPALALGHFVDLLEHEDAEFITTDLALRWAMTPALVE
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RATWGRRLSQVRGFARWMNVIDGRNQIPPAGLLSARRRRNAPHIYTEQEIDLLMTRAAQL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RSRTGMRALTYSTLIGLLVATGLRPGEALRLDRSDVDLVSGILSIRESKFGKSRFVPVAE
HHHCCHHHHHHHHHHHHHHHCCCCCCHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCH
STRVALEHYAKKRDQLCPSRLSEAFLVSERGKRLKAGTARSMFVRMSRAVGLRSATEDGR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCC
DGYGPRLQDFRHSFATGRLVEWYRAGLDVSRELPKLAAYLGHVNIGLTYWYIEAVPELLE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAAYLDKDCPGERP
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]