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The map label for this gene is hoxW

Identifier: 38637757

GI number: 38637757

Start: 84315

End: 84812

Strand: Direct

Name: hoxW

Synonym: PHG092

Alternate gene names: NA

Gene position: 84315-84812 (Clockwise)

Preceding gene: 38637756

Following gene: 38637758

Centisome position: 18.65

GC content: 60.04

Gene sequence:

>498_bases
ATGAACGCGCCCGCTGAGTTTCCCTATGTGACCCTTGCCGATTTCGATGATCCGTCGACGCTGATCTACGGAATCGGCAA
CGTGGGTCGGCAGGACGACGGATTGGGGTGGGCTTTCATCGACCGACTGGAAGCGGAGTCCCTCTGCTCCGGGGCGGAGG
TTCAGCGGCATTATCAGCTTCACCTCGAGGATGCCGACCTGATCAGCCGCAAGAGAAAGGTGTTGTTCATCGATGCCACG
AAAGATGCGTCGGTGGCGTCATTCAGCCTGGAGCGCGCGGAACCACGGATGGACTTCAGCTTTACGTCGCACGCGATCTC
GATTCCGTCGATCATGGCGACCTGCCAAAGGTGCTTTCAGTGCTTGCCGGAAGTCTATGTGCTGGCGATCCGGGGCTACG
AGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCC
GAGCGTCAAACCTCGTGA

Upstream 100 bases:

>100_bases
GGTATTCGCGCCTACGATCCATGCCTGAGCTGCGCGACACACGCCCTGGGGCAGATGCCGCTGGTGGTCTCGGTCTTTGA
CGCGGCGGGGCGCCTGATCG

Downstream 100 bases:

>100_bases
AATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCG
AGTATATCGGCCGGGATGGC

Product: [NiFe] hydrogenase (HoxH-specific) C-terminal protease

Products: NA

Alternate protein names: Hydrogenase Maturation Protease; [NiFe] Hydrogenase C-Terminal Protease; Hydrogenase-Specific Protease; Ni Fe-Hydrogenase Maturation Factor

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNAPAEFPYVTLADFDDPSTLIYGIGNVGRQDDGLGWAFIDRLEAESLCSGAEVQRHYQLHLEDADLISRKRKVLFIDAT
KDASVASFSLERAEPRMDFSFTSHAISIPSIMATCQRCFQCLPEVYVLAIRGYEWELRMGLTPQARHNLDDAIAHFSMRA
ERQTS

Sequences:

>Translated_165_residues
MNAPAEFPYVTLADFDDPSTLIYGIGNVGRQDDGLGWAFIDRLEAESLCSGAEVQRHYQLHLEDADLISRKRKVLFIDAT
KDASVASFSLERAEPRMDFSFTSHAISIPSIMATCQRCFQCLPEVYVLAIRGYEWELRMGLTPQARHNLDDAIAHFSMRA
ERQTS
>Mature_165_residues
MNAPAEFPYVTLADFDDPSTLIYGIGNVGRQDDGLGWAFIDRLEAESLCSGAEVQRHYQLHLEDADLISRKRKVLFIDAT
KDASVASFSLERAEPRMDFSFTSHAISIPSIMATCQRCFQCLPEVYVLAIRGYEWELRMGLTPQARHNLDDAIAHFSMRA
ERQTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18634; Mature: 18634

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPAEFPYVTLADFDDPSTLIYGIGNVGRQDDGLGWAFIDRLEAESLCSGAEVQRHYQL
CCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEEEEEE
HLEDADLISRKRKVLFIDATKDASVASFSLERAEPRMDFSFTSHAISIPSIMATCQRCFQ
ECCCHHHHHCCCEEEEEECCCCCCHHHEEHHHCCCCCCEEECCCEECHHHHHHHHHHHHH
CLPEVYVLAIRGYEWELRMGLTPQARHNLDDAIAHFSMRAERQTS
HHHHHHEEEECCCEEEEEECCCCHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNAPAEFPYVTLADFDDPSTLIYGIGNVGRQDDGLGWAFIDRLEAESLCSGAEVQRHYQL
CCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEEEEEE
HLEDADLISRKRKVLFIDATKDASVASFSLERAEPRMDFSFTSHAISIPSIMATCQRCFQ
ECCCHHHHHCCCEEEEEECCCCCCHHHEEHHHCCCCCCEEECCCEECHHHHHHHHHHHHH
CLPEVYVLAIRGYEWELRMGLTPQARHNLDDAIAHFSMRAERQTS
HHHHHHEEEECCCEEEEEECCCCHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA