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The map label for this gene is hypA3 [H]

Identifier: 38637742

GI number: 38637742

Start: 72687

End: 73016

Strand: Direct

Name: hypA3 [H]

Synonym: PHG077

Alternate gene names: 38637742

Gene position: 72687-73016 (Clockwise)

Preceding gene: 38637741

Following gene: 38637743

Centisome position: 16.08

GC content: 66.06

Gene sequence:

>330_bases
ATGCACGAACTAAGTATCGCGAACAGCGTGGTCGAGATCTGTGCCGAGCAGGCGCGGGGCGCGCGCGTGCTCTGGGTGCA
GCTCGAGATCGGCCGGCTATGTGCGGTGATGCCGGATGCTATCCGGTTCTGCTTCGACGTGTGTGCGAAGGATACGGCGG
TGGAAGGCGCGGAGCTGGAGATCGTGGAGACTCCCGGCGTGGCGCGCTGCTTGGCCTGCGGCGCCGAGTTGGAGATCGCG
GTGCCGTTCGGGCAGTGCGCGTGCGGCAGCGAGAACCTGGAGTTGATCTCCGGGCAGCAGTTGAAGATCCGGCGCATGGA
GGTGGCGTGA

Upstream 100 bases:

>100_bases
CGGCTTTGGCGGGCAGCGGGTTGTGGACATGCTGGTGGGCGAGCAGCTGCCGCGGATCTGCTGAGTGGCCGCACCCGGTG
GACAGCAAGCGAAGGCCGAC

Downstream 100 bases:

>100_bases
TGTGCACGACTTGCGGTTGCGGCGATACGACGGGCGCAGTGGTCTCGGGCCCGGCAGCAGAAGGTGAACCGGCGCCAACA
GCCGGCGCGGGACAGGACGT

Product: HypA3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MHELSIANSVVEICAEQARGARVLWVQLEIGRLCAVMPDAIRFCFDVCAKDTAVEGAELEIVETPGVARCLACGAELEIA
VPFGQCACGSENLELISGQQLKIRRMEVA

Sequences:

>Translated_109_residues
MHELSIANSVVEICAEQARGARVLWVQLEIGRLCAVMPDAIRFCFDVCAKDTAVEGAELEIVETPGVARCLACGAELEIA
VPFGQCACGSENLELISGQQLKIRRMEVA
>Mature_109_residues
MHELSIANSVVEICAEQARGARVLWVQLEIGRLCAVMPDAIRFCFDVCAKDTAVEGAELEIVETPGVARCLACGAELEIA
VPFGQCACGSENLELISGQQLKIRRMEVA

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step [H]

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family [H]

Homologues:

Organism=Escherichia coli, GI1789365, Length=112, Percent_Identity=40.1785714285714, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000688
- InterPro:   IPR020538 [H]

Pfam domain/function: PF01155 HypA [H]

EC number: NA

Molecular weight: Translated: 11736; Mature: 11736

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS01249 HYPA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
7.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHELSIANSVVEICAEQARGARVLWVQLEIGRLCAVMPDAIRFCFDVCAKDTAVEGAELE
CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
IVETPGVARCLACGAELEIAVPFGQCACGSENLELISGQQLKIRRMEVA
EEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCEEECCCEEEEEEEECC
>Mature Secondary Structure
MHELSIANSVVEICAEQARGARVLWVQLEIGRLCAVMPDAIRFCFDVCAKDTAVEGAELE
CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
IVETPGVARCLACGAELEIAVPFGQCACGSENLELISGQQLKIRRMEVA
EEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA