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The map label for this gene is xerC [C]

Identifier: 38637703

GI number: 38637703

Start: 34251

End: 35249

Strand: Direct

Name: xerC [C]

Synonym: PHG038

Alternate gene names: 38637703

Gene position: 34251-35249 (Clockwise)

Preceding gene: 38637702

Following gene: 38637708

Centisome position: 7.58

GC content: 58.26

Gene sequence:

>999_bases
ATGACTACTACCGCCAGTCTCGCTCCGTTGCTGGAGCGTTTCTTTACGCAACGCCTGATGCAGCAGCGCCAGGCGAGTCC
CCACACGATTAGTTCCTATCGCGACACCTTTCGTCAATTCCTGAAGTTCGCGCTGCAACGCCTGCACCGGCAGCCTTCAC
GCATGAATTTCGAGGAAATCGATGCCCCTTTGATCGTTGCATTTCTCGATGACCTGGAGAAGCGTCAGGGCGTGAGCGTT
CGGAGTCGAAATCTTCGCCTTACGGCAATTCATTCATTCTTTCGTTACGCGGCGCTCGAGACGCCGGCTCATTCCGCGCA
GATCCAGCGAGTGCTCGCTATCCCCAGCAAGCGCTTTACCCGCACCCTGGTGCAATTCCTGACGCGCCAGGAAGTCGATG
CGCTGCTCGCCGCACCGGACCAGCGTACCTGGTCCGGCCGACGCGATCACGCCTTTTTGCTCTTCGCCGTACAAACTGGC
CTGCGCCTGTCCGAGATGACTGGACTTAAGCGCGATGACCTCGTCCTCGGAATCGGTGCTCACGTGCGGGTGATCGGCAA
GGGTCGGAAAGAGCGTTGTACGCCCATCGTCAGATCCACGCTCGCCGTGCTGAAAGCCTGGCTTCGGGAACCCAAGCGCG
GTGAGGGGGACGTGCTTTTTCCGAACGCGAGGGGCGAACGTCTCACCGTTCATGGCGTGCAGTATCTCCTAAACAAGCAT
CGAGAGACCGCGTCAAAAGTTTGTCCGTCGTTGAAGCACAAACAGGTCACCGTTCACCGTTTGAGGCATACGATGGCCAT
GGACCTTCTGCAGGCGGGCGTTGATCGTTCCGTGATTGCGCTGTGGCTCGGGCATGAATCGGTGGAAACCACGCAGATTT
ATCTCGAAGCGACACTTGCGATGAAGGAGCAGGCTCTCGCGAAGACATCTCTGGCTCAAGGCAAGCCAGGACGCTACCGG
CCTGCAGACCAACTTCTCGGCTTCCTGAATGGACTGTAA

Upstream 100 bases:

>100_bases
GTCATGTCCACATCGAGGATACGCAGTGGTATCTGAACGCCTCGCCGGAGCTGATGCGCGAGGCGATGCGCCGGCTCGAA
CAGCGCTGGGAGATTCAACC

Downstream 100 bases:

>100_bases
GGCCACGGAACTATGTCGGGTAATGACTGGCGGGATGGCTCCGCGAGAAGTGCGCATCGGACGATCACGGACGCTCATCC
TCATTACCCGATATAGTCAG

Product: putative integrase/recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MTTTASLAPLLERFFTQRLMQQRQASPHTISSYRDTFRQFLKFALQRLHRQPSRMNFEEIDAPLIVAFLDDLEKRQGVSV
RSRNLRLTAIHSFFRYAALETPAHSAQIQRVLAIPSKRFTRTLVQFLTRQEVDALLAAPDQRTWSGRRDHAFLLFAVQTG
LRLSEMTGLKRDDLVLGIGAHVRVIGKGRKERCTPIVRSTLAVLKAWLREPKRGEGDVLFPNARGERLTVHGVQYLLNKH
RETASKVCPSLKHKQVTVHRLRHTMAMDLLQAGVDRSVIALWLGHESVETTQIYLEATLAMKEQALAKTSLAQGKPGRYR
PADQLLGFLNGL

Sequences:

>Translated_332_residues
MTTTASLAPLLERFFTQRLMQQRQASPHTISSYRDTFRQFLKFALQRLHRQPSRMNFEEIDAPLIVAFLDDLEKRQGVSV
RSRNLRLTAIHSFFRYAALETPAHSAQIQRVLAIPSKRFTRTLVQFLTRQEVDALLAAPDQRTWSGRRDHAFLLFAVQTG
LRLSEMTGLKRDDLVLGIGAHVRVIGKGRKERCTPIVRSTLAVLKAWLREPKRGEGDVLFPNARGERLTVHGVQYLLNKH
RETASKVCPSLKHKQVTVHRLRHTMAMDLLQAGVDRSVIALWLGHESVETTQIYLEATLAMKEQALAKTSLAQGKPGRYR
PADQLLGFLNGL
>Mature_331_residues
TTTASLAPLLERFFTQRLMQQRQASPHTISSYRDTFRQFLKFALQRLHRQPSRMNFEEIDAPLIVAFLDDLEKRQGVSVR
SRNLRLTAIHSFFRYAALETPAHSAQIQRVLAIPSKRFTRTLVQFLTRQEVDALLAAPDQRTWSGRRDHAFLLFAVQTGL
RLSEMTGLKRDDLVLGIGAHVRVIGKGRKERCTPIVRSTLAVLKAWLREPKRGEGDVLFPNARGERLTVHGVQYLLNKHR
ETASKVCPSLKHKQVTVHRLRHTMAMDLLQAGVDRSVIALWLGHESVETTQIYLEATLAMKEQALAKTSLAQGKPGRYRP
ADQLLGFLNGL

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=288, Percent_Identity=29.8611111111111, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1789261, Length=186, Percent_Identity=35.4838709677419, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 37758; Mature: 37627

Theoretical pI: Translated: 11.37; Mature: 11.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTASLAPLLERFFTQRLMQQRQASPHTISSYRDTFRQFLKFALQRLHRQPSRMNFEEI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
DAPLIVAFLDDLEKRQGVSVRSRNLRLTAIHSFFRYAALETPAHSAQIQRVLAIPSKRFT
CCHHHHHHHHHHHHHCCCCCHHCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH
RTLVQFLTRQEVDALLAAPDQRTWSGRRDHAFLLFAVQTGLRLSEMTGLKRDDLVLGIGA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHCCCCCCCEEEECCC
HVRVIGKGRKERCTPIVRSTLAVLKAWLREPKRGEGDVLFPNARGERLTVHGVQYLLNKH
EEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEHHHHHHHHHHH
RETASKVCPSLKHKQVTVHRLRHTMAMDLLQAGVDRSVIALWLGHESVETTQIYLEATLA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHH
MKEQALAKTSLAQGKPGRYRPADQLLGFLNGL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TTTASLAPLLERFFTQRLMQQRQASPHTISSYRDTFRQFLKFALQRLHRQPSRMNFEEI
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
DAPLIVAFLDDLEKRQGVSVRSRNLRLTAIHSFFRYAALETPAHSAQIQRVLAIPSKRFT
CCHHHHHHHHHHHHHCCCCCHHCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH
RTLVQFLTRQEVDALLAAPDQRTWSGRRDHAFLLFAVQTGLRLSEMTGLKRDDLVLGIGA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHCCCCCCCEEEECCC
HVRVIGKGRKERCTPIVRSTLAVLKAWLREPKRGEGDVLFPNARGERLTVHGVQYLLNKH
EEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEHHHHHHHHHHH
RETASKVCPSLKHKQVTVHRLRHTMAMDLLQAGVDRSVIALWLGHESVETTQIYLEATLA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHH
MKEQALAKTSLAQGKPGRYRPADQLLGFLNGL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]