Click here to switch to the map view.

The map label for this gene is hypX [H]

Identifier: 38637686

GI number: 38637686

Start: 13681

End: 15474

Strand: Direct

Name: hypX [H]

Synonym: PHG018

Alternate gene names: 38637686

Gene position: 13681-15474 (Clockwise)

Preceding gene: 38637685

Following gene: 38637687

Centisome position: 3.03

GC content: 63.32

Gene sequence:

>1794_bases
ATGCGCATATTGCTCCTCACCCATAGCTTCAACAGTCTGACGCAGCGACTGTTTGTCGAGTTGCGCCAGCGCGGCCACCT
GGTGTCGGTGGAGTTCGATATTGCCGATTCCGTGACCGAGGAGGCCGTGGCGCTGTTCGCCCCCGATCTGGTCATCGCCC
CTTTTCTCAAGCGTGCGATTCCGGAACGAATATGGAGTCGACTGGTCTGTCTGGTGGTGCATCCTGGCATTGTCGGCGAT
CGCGGCCCGAGTGCGCTGGACTGGGCGATCGTTCGAGACGAACGAAGTTGGGGTGTGACGGTGTTGCAGGCCAACGGCGA
GATGGATGCAGGTCCGGTATGGGCTAGCGCCACGTTCCCAATGCGCGCGGCACGCAAGAGCAGCCTGTATCGTAACGAGG
TGACGGTGGCAGCAGTACAAGCTGTGCTGGAGGCGCTGGCGGCTTTTGAAGCCGGCTGGCGTTCGGCGAATGATGCGCAG
AGCGGCCCGGGCACCTGGAATCCTGCAATGCGGCAGGCTGAGCGCGGCATCGACTGGGCGCGTGAGTCGACTGCCGCCGT
GCTGGCAAAGCTACATGCGGCCGATAGCTTTCCCGGCGTACCGGATGCCTTGTTCGGCCAGCCGTGCCGGCTGTTCGACG
CCCACGCCGCGACCCCGCAGACGGTCGCACGCGCGCCGCGAGGCCAGCCTGGCGATATCGTTGCGCGCCGTGAGCATGCC
GTGCTGCGCCTGACGGTGGACGCAGGCGTGTGGATCGGTCACGCCAAGCTGGCCGTGCGCGATGAGTGGGAAAACACAAG
CCTGCCATCTCTCAAGCTGCCGGTGGCGCAAGTATTTCATGAGGCGTGGGCGCAATTGCCGGACCTGTCGCTGCCGCTGG
AACACGACGCCGGCGAGTGGAGCGAGTTCCGGTACTGGGAAGACGATTCCGGCGCGGGCCTGGTCGGATACCTCGCCTTC
GACTGCTATAACGGGGCGATGTCGACCGCGCAATGCCAACGGCTTTGCGCCGCCTTGCGCTACGCGCGCGGTCGCCAGAC
GCGGGTGCTGGTGCTGCTGGGGGGAGAGGATTTTTTCAGCAATGGTATTCATCTGCACCAAATCGAGGCGGCGGAGCACC
GGGGCGCGGAGAGCGCGGCCGATGCCTCCTGGCGCAATATTCAGGCGATGGACGACGTCGCGCTGGAAATCCTTGCGTTT
TCCGATCGCATGACGGTGTCGGCGCTGCGCGGCAATGCGGGAGCGGGCGGCGTGTTCTTGGCGCTGGCGGCCGATCAGGT
ATGGGCGCGCGAAGGTGTACTCGTGAATCCGCACTACAAGAACATGGGCAATCTGTATGGTTCGGAATACTGGACCTATC
TGTTGCCGCAACGCGTCGGTGCGCAACGAGCCAGTGATCTGATGGACGGCCGTTTGCCAATGTCGGTCCGGCGGGCGATC
GAGATTGGGCTGATCGATGCCAGCTTGGACGGCGACGCGCGCTCGTGCCTTGCCGAGATTGGCCGCCGCGCCGTTGCGCT
GGCCCGGGCGCCAGACTATGCTGCGCATATTGACAACAAGCGGCGAAAACGGGCCGCAGACGAAGCGGCAAAGCCGCTGG
CCCAGTATCGAGAGGAAGAATTGGTGCATATGCATCGGAATTTCTATGGATTCGATCCGAGCTATCACGTGGCACGCTAT
CATTTCGTCTACAAATTACCCCATGCACATACGCCTCGCCACCTTGCCATGCACCGGGGTGGCAGCCTGCCGGCGGCACA
AGAGTTGCAGGCACTTGCGGGGAAACGATCTTGA

Upstream 100 bases:

>100_bases
GGCGCCACTTTGTGCAGATGCGCACAAAATTCGGCGGGATGCGCGTGGTGGACTGGCTGTCCGGCGAGCAGCTTCCGCGC
ATTTGTTGAGCGAGTCGGCT

Downstream 100 bases:

>100_bases
GCCATGTCTGACAAGCAGGCCACTGTTCTTGTCGTCGACGACGAAACCCGTTCACAGGATGCTCTCCGGCGCACTCTTGA
CGAGGAATTCCGTGTACTGA

Product: HypX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MRILLLTHSFNSLTQRLFVELRQRGHLVSVEFDIADSVTEEAVALFAPDLVIAPFLKRAIPERIWSRLVCLVVHPGIVGD
RGPSALDWAIVRDERSWGVTVLQANGEMDAGPVWASATFPMRAARKSSLYRNEVTVAAVQAVLEALAAFEAGWRSANDAQ
SGPGTWNPAMRQAERGIDWARESTAAVLAKLHAADSFPGVPDALFGQPCRLFDAHAATPQTVARAPRGQPGDIVARREHA
VLRLTVDAGVWIGHAKLAVRDEWENTSLPSLKLPVAQVFHEAWAQLPDLSLPLEHDAGEWSEFRYWEDDSGAGLVGYLAF
DCYNGAMSTAQCQRLCAALRYARGRQTRVLVLLGGEDFFSNGIHLHQIEAAEHRGAESAADASWRNIQAMDDVALEILAF
SDRMTVSALRGNAGAGGVFLALAADQVWAREGVLVNPHYKNMGNLYGSEYWTYLLPQRVGAQRASDLMDGRLPMSVRRAI
EIGLIDASLDGDARSCLAEIGRRAVALARAPDYAAHIDNKRRKRAADEAAKPLAQYREEELVHMHRNFYGFDPSYHVARY
HFVYKLPHAHTPRHLAMHRGGSLPAAQELQALAGKRS

Sequences:

>Translated_597_residues
MRILLLTHSFNSLTQRLFVELRQRGHLVSVEFDIADSVTEEAVALFAPDLVIAPFLKRAIPERIWSRLVCLVVHPGIVGD
RGPSALDWAIVRDERSWGVTVLQANGEMDAGPVWASATFPMRAARKSSLYRNEVTVAAVQAVLEALAAFEAGWRSANDAQ
SGPGTWNPAMRQAERGIDWARESTAAVLAKLHAADSFPGVPDALFGQPCRLFDAHAATPQTVARAPRGQPGDIVARREHA
VLRLTVDAGVWIGHAKLAVRDEWENTSLPSLKLPVAQVFHEAWAQLPDLSLPLEHDAGEWSEFRYWEDDSGAGLVGYLAF
DCYNGAMSTAQCQRLCAALRYARGRQTRVLVLLGGEDFFSNGIHLHQIEAAEHRGAESAADASWRNIQAMDDVALEILAF
SDRMTVSALRGNAGAGGVFLALAADQVWAREGVLVNPHYKNMGNLYGSEYWTYLLPQRVGAQRASDLMDGRLPMSVRRAI
EIGLIDASLDGDARSCLAEIGRRAVALARAPDYAAHIDNKRRKRAADEAAKPLAQYREEELVHMHRNFYGFDPSYHVARY
HFVYKLPHAHTPRHLAMHRGGSLPAAQELQALAGKRS
>Mature_597_residues
MRILLLTHSFNSLTQRLFVELRQRGHLVSVEFDIADSVTEEAVALFAPDLVIAPFLKRAIPERIWSRLVCLVVHPGIVGD
RGPSALDWAIVRDERSWGVTVLQANGEMDAGPVWASATFPMRAARKSSLYRNEVTVAAVQAVLEALAAFEAGWRSANDAQ
SGPGTWNPAMRQAERGIDWARESTAAVLAKLHAADSFPGVPDALFGQPCRLFDAHAATPQTVARAPRGQPGDIVARREHA
VLRLTVDAGVWIGHAKLAVRDEWENTSLPSLKLPVAQVFHEAWAQLPDLSLPLEHDAGEWSEFRYWEDDSGAGLVGYLAF
DCYNGAMSTAQCQRLCAALRYARGRQTRVLVLLGGEDFFSNGIHLHQIEAAEHRGAESAADASWRNIQAMDDVALEILAF
SDRMTVSALRGNAGAGGVFLALAADQVWAREGVLVNPHYKNMGNLYGSEYWTYLLPQRVGAQRASDLMDGRLPMSVRRAI
EIGLIDASLDGDARSCLAEIGRRAVALARAPDYAAHIDNKRRKRAADEAAKPLAQYREEELVHMHRNFYGFDPSYHVARY
HFVYKLPHAHTPRHLAMHRGGSLPAAQELQALAGKRS

Specific function: Involved in the post-translational processing of the hydrogenase large subunit [H]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001753
- InterPro:   IPR005793
- InterPro:   IPR002376
- InterPro:   IPR011034
- InterPro:   IPR015518
- InterPro:   IPR009188 [H]

Pfam domain/function: PF00378 ECH; PF02911 Formyl_trans_C; PF00551 Formyl_trans_N [H]

EC number: NA

Molecular weight: Translated: 65740; Mature: 65740

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLLTHSFNSLTQRLFVELRQRGHLVSVEFDIADSVTEEAVALFAPDLVIAPFLKRAI
CEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHH
PERIWSRLVCLVVHPGIVGDRGPSALDWAIVRDERSWGVTVLQANGEMDAGPVWASATFP
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEECCCCC
MRAARKSSLYRNEVTVAAVQAVLEALAAFEAGWRSANDAQSGPGTWNPAMRQAERGIDWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHH
RESTAAVLAKLHAADSFPGVPDALFGQPCRLFDAHAATPQTVARAPRGQPGDIVARREHA
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHCCCCCCHHHHHHCCCCCCCCEEEECCCE
VLRLTVDAGVWIGHAKLAVRDEWENTSLPSLKLPVAQVFHEAWAQLPDLSLPLEHDAGEW
EEEEEEECCEEEECEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
SEFRYWEDDSGAGLVGYLAFDCYNGAMSTAQCQRLCAALRYARGRQTRVLVLLGGEDFFS
HHCCEEECCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH
NGIHLHQIEAAEHRGAESAADASWRNIQAMDDVALEILAFSDRMTVSALRGNAGAGGVFL
CCEEEEEECHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEE
ALAADQVWAREGVLVNPHYKNMGNLYGSEYWTYLLPQRVGAQRASDLMDGRLPMSVRRAI
EEEHHHHHHCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHE
EIGLIDASLDGDARSCLAEIGRRAVALARAPDYAAHIDNKRRKRAADEAAKPLAQYREEE
EEEEEEECCCCHHHHHHHHHHHHHEEHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LVHMHRNFYGFDPSYHVARYHFVYKLPHAHTPRHLAMHRGGSLPAAQELQALAGKRS
HHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MRILLLTHSFNSLTQRLFVELRQRGHLVSVEFDIADSVTEEAVALFAPDLVIAPFLKRAI
CEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHH
PERIWSRLVCLVVHPGIVGDRGPSALDWAIVRDERSWGVTVLQANGEMDAGPVWASATFP
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEECCCCC
MRAARKSSLYRNEVTVAAVQAVLEALAAFEAGWRSANDAQSGPGTWNPAMRQAERGIDWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHH
RESTAAVLAKLHAADSFPGVPDALFGQPCRLFDAHAATPQTVARAPRGQPGDIVARREHA
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHCCCCCCHHHHHHCCCCCCCCEEEECCCE
VLRLTVDAGVWIGHAKLAVRDEWENTSLPSLKLPVAQVFHEAWAQLPDLSLPLEHDAGEW
EEEEEEECCEEEECEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
SEFRYWEDDSGAGLVGYLAFDCYNGAMSTAQCQRLCAALRYARGRQTRVLVLLGGEDFFS
HHCCEEECCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH
NGIHLHQIEAAEHRGAESAADASWRNIQAMDDVALEILAFSDRMTVSALRGNAGAGGVFL
CCEEEEEECHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEE
ALAADQVWAREGVLVNPHYKNMGNLYGSEYWTYLLPQRVGAQRASDLMDGRLPMSVRRAI
EEEHHHHHHCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHE
EIGLIDASLDGDARSCLAEIGRRAVALARAPDYAAHIDNKRRKRAADEAAKPLAQYREEE
EEEEEEECCCCHHHHHHHHHHHHHEEHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LVHMHRNFYGFDPSYHVARYHFVYKLPHAHTPRHLAMHRGGSLPAAQELQALAGKRS
HHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8510650; 12597275 [H]