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The map label for this gene is parB [H]

Identifier: 38234909

GI number: 38234909

Start: 2482889

End: 2483992

Strand: Reverse

Name: parB [H]

Synonym: DIP2376

Alternate gene names: 38234909

Gene position: 2483992-2482889 (Counterclockwise)

Preceding gene: 38234910

Following gene: 38234901

Centisome position: 99.81

GC content: 58.24

Gene sequence:

>1104_bases
ATGGCTCAAGAAACTCGCAAAGGTGGACTAGGGCGCGGCCTTGCTGCACTGATTACTAGCAGCCCCTCTGCTGGCTCCCG
TATCGGCGACACCGCCGCGGACGTCGTATTCGGTGGGCCTTCCACAACACCACCCAAGCCTGGGGAAAAGAAAAAGCCGG
AAGCTCCAAAACCCGCAGCAAAGCGCCACCGCAGCGGCGGAAACATCAACCCCATTCTGGCTGATGTTGTAGAAAGCCAC
GAGCGGGAAGAAAGTGCTGTCCGCGAACGACGCACCCAAGAACAACTCGAAGAGTTCGGTGCCACTTACCGTGAGATTCC
CGTGGGCATGCTCGTACCCAACGAGAAAAACCCTCGCAGCGTCTTCGACGAAGATGATCTCTCCGAGCTCGTCCACTCCA
TCAAAGAGTTCGGGCTCTTGCAGCCCATCGTCGTGCGCAGGGTCAAAGAATCCCCCGATGAGCGCTACGAGATCATCATG
GGTGAACGCCGTTGGCGAGCCTCGTCGAAAGCCGGTCTGCCCACGATTCCAGCAATCGTGCGGCAAACCGACGACTCCGA
CATGTTGCGCGATGCCCTGCTGGAAAACATCCACCGCGTCCAACTCAACCCCCTCGAAGAAGCAGCGGCCTACCAGCAGC
TTCTCGAAGAATTCGGCGTCACCCAAAACGAGCTCGCCGATCGCCTCGGGCGCTCACGGCCAGTAATCACCAACATGATC
CGCCTGCTCGGACTTCCTGTCGACGTACAACGCAAAGTCGCAGCCGGTGTTCTTTCCGCAGGCCATGCCCGCGCACTACT
CGGTGTAAAAGCCGGCGAAGACACCCAGGCAGAACTCGCACAGCGGATCATCGCCGAAGGACTATCAGTACGCGCCACCG
AAGAAGCAGTAACCCTGCTTAACCGTGGCGAGAAACCAGCACCGAAAAAGCGTGAAAAAACACCAACACCAGAGTTTCTT
ACCCACGCAGCCGATCGCCTCGCCGACGACCTAGACACCAAAGTGTCCGTCAGCATGGGCAAACGCAAAGGCAAAATTGT
GGTGGAATTCGGAGGCCGTGAAGACTTCGAACGCATCATGGGCCTACTCGGCGGAGAGCACTAA

Upstream 100 bases:

>100_bases
ACGGCGCCTCCAAGAACAGCTCGATGCCCAAGACGGCGAAGGTGACCAACCGGAAGCTGCCGACGTGATCAACCTAGAAA
CATCGAAGGAGTAACGCTTT

Downstream 100 bases:

>100_bases
AACATACTAAAAAAGGGAGCCTCCTAGGAGGCTCCCTTTGCTATGTGCTGTGCAGGGGGCTAAGGGGCTACAGCAAACCC
TGCTCCAGCATCTCAGAGAA

Product: putative chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MAQETRKGGLGRGLAALITSSPSAGSRIGDTAADVVFGGPSTTPPKPGEKKKPEAPKPAAKRHRSGGNINPILADVVESH
EREESAVRERRTQEQLEEFGATYREIPVGMLVPNEKNPRSVFDEDDLSELVHSIKEFGLLQPIVVRRVKESPDERYEIIM
GERRWRASSKAGLPTIPAIVRQTDDSDMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQNELADRLGRSRPVITNMI
RLLGLPVDVQRKVAAGVLSAGHARALLGVKAGEDTQAELAQRIIAEGLSVRATEEAVTLLNRGEKPAPKKREKTPTPEFL
THAADRLADDLDTKVSVSMGKRKGKIVVEFGGREDFERIMGLLGGEH

Sequences:

>Translated_367_residues
MAQETRKGGLGRGLAALITSSPSAGSRIGDTAADVVFGGPSTTPPKPGEKKKPEAPKPAAKRHRSGGNINPILADVVESH
EREESAVRERRTQEQLEEFGATYREIPVGMLVPNEKNPRSVFDEDDLSELVHSIKEFGLLQPIVVRRVKESPDERYEIIM
GERRWRASSKAGLPTIPAIVRQTDDSDMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQNELADRLGRSRPVITNMI
RLLGLPVDVQRKVAAGVLSAGHARALLGVKAGEDTQAELAQRIIAEGLSVRATEEAVTLLNRGEKPAPKKREKTPTPEFL
THAADRLADDLDTKVSVSMGKRKGKIVVEFGGREDFERIMGLLGGEH
>Mature_366_residues
AQETRKGGLGRGLAALITSSPSAGSRIGDTAADVVFGGPSTTPPKPGEKKKPEAPKPAAKRHRSGGNINPILADVVESHE
REESAVRERRTQEQLEEFGATYREIPVGMLVPNEKNPRSVFDEDDLSELVHSIKEFGLLQPIVVRRVKESPDERYEIIMG
ERRWRASSKAGLPTIPAIVRQTDDSDMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQNELADRLGRSRPVITNMIR
LLGLPVDVQRKVAAGVLSAGHARALLGVKAGEDTQAELAQRIIAEGLSVRATEEAVTLLNRGEKPAPKKREKTPTPEFLT
HAADRLADDLDTKVSVSMGKRKGKIVVEFGGREDFERIMGLLGGEH

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 40192; Mature: 40061

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQETRKGGLGRGLAALITSSPSAGSRIGDTAADVVFGGPSTTPPKPGEKKKPEAPKPAA
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCHH
KRHRSGGNINPILADVVESHEREESAVRERRTQEQLEEFGATYREIPVGMLVPNEKNPRS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEECCCCCCCCC
VFDEDDLSELVHSIKEFGLLQPIVVRRVKESPDERYEIIMGERRWRASSKAGLPTIPAIV
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCHHHCCCCCCCCCHHHHHH
RQTDDSDMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQNELADRLGRSRPVITNMI
HCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHH
RLLGLPVDVQRKVAAGVLSAGHARALLGVKAGEDTQAELAQRIIAEGLSVRATEEAVTLL
HHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
NRGEKPAPKKREKTPTPEFLTHAADRLADDLDTKVSVSMGKRKGKIVVEFGGREDFERIM
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEHHHCCCCCEEEEEECCHHHHHHHH
GLLGGEH
HHHCCCC
>Mature Secondary Structure 
AQETRKGGLGRGLAALITSSPSAGSRIGDTAADVVFGGPSTTPPKPGEKKKPEAPKPAA
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCHH
KRHRSGGNINPILADVVESHEREESAVRERRTQEQLEEFGATYREIPVGMLVPNEKNPRS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEECCCCCCCCC
VFDEDDLSELVHSIKEFGLLQPIVVRRVKESPDERYEIIMGERRWRASSKAGLPTIPAIV
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCHHHCCCCCCCCCHHHHHH
RQTDDSDMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQNELADRLGRSRPVITNMI
HCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHH
RLLGLPVDVQRKVAAGVLSAGHARALLGVKAGEDTQAELAQRIIAEGLSVRATEEAVTLL
HHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
NRGEKPAPKKREKTPTPEFLTHAADRLADDLDTKVSVSMGKRKGKIVVEFGGREDFERIM
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEHHHCCCCCEEEEEECCHHHHHHHH
GLLGGEH
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]