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The map label for this gene is 38234848

Identifier: 38234848

GI number: 38234848

Start: 2412566

End: 2413810

Strand: Reverse

Name: 38234848

Synonym: DIP2313

Alternate gene names: NA

Gene position: 2413810-2412566 (Counterclockwise)

Preceding gene: 38234849

Following gene: 38234847

Centisome position: 96.99

GC content: 49.48

Gene sequence:

>1245_bases
GTGAGAATACAGATTGGTGAGCTCATTCGTTCAGGTGTCCTTGAACTGGGTGATGGTTACCGTACTAAGAGGTCTGAACT
CTCCCAATTTGGCTATGCCATTGTGAGGGCAGGGGATGTGGTCGAAATTGGAGTTACTGCTAGCGATTCCGAATTTGTTG
ATCAGCGCTTCGACAAAGCGATTGGTAGAAAGACAGTCCGTCTCGGTGATGTTGTAATAACGACAAAAGGAACGGTAGGG
CGTGTAGCGGAAGTTTCGAAGGTCCCAAACGCAGGACTTGCGGTTTACAGCCCTCAAGTTTGTTATTTGCGTTCGCTTCA
ACCGTCGATTCTTCACCAACGCTATTTGAAGTACCTTCTCATGTCGCCTGCCACGAAATACTCGATTTCGACATTTGCTT
CGAGCTCCGACATGGCACCATATTTGAGCTTGAGCGACTTCAAGTCCATGGTCGTTGATCTGCCTTCATTGGAAGACCAG
CGCGCAATCGCCGATGTCCTCGGCGCCTTGGATGACAAGATTGCGGAGAACCAGCGGGTTATTCAGCTGTCTGAGCAGTT
GGCAATGACCTTTTACCGAAGCACGGAAAAATCGGAATCGTCGCTGACTTTCGCTGATGTTGCCGGAATTTACGGTGGCG
GAACGCCATCCACAAAGAATCCTGATTTTTGGGATGGCGAAATCAGGTGGGCGACTCCAACAGATATCACAGCATTAAAA
GGTCCTTGGTTATGCGGAACTGCACGTTCAATTACTGAGGAGGGATTATCGAAAAGCTCAGGTTCGCTCCATCCTGAAGG
TTCAATCTTGATGACTTCGCGAGCAACGGTTGGGCATGTGGCATTCATTGATGCTCCTACTACAACCAACCAAGGCTTCA
TCAACCTCGTGCCTCAAGAGGCTTATAGATATTGGCTGTACTTCCAACTGAAACAGAGAACTTCTGAGTTTATCGCCTGG
GCAAACGGTGCGACATTCTTGGAGCTTTCACGTGGAACTTTTAAGAAGCTTCCATTTCAAGCATGCGCTGAAACTGAGTT
GGAAAAGTTCAACTCGGTGGTTGCTCCTTTAATGAAACGTGTGCTCAAAGCACAGAAAGAAAACCAAGTCCTCGCCGCTA
CCCGTGACGAGCTATTGCCGCTGCTCATGAACGGGAAGATCACCGTTGCCGAGGCGAAGGAAGCGGCCGGGGACGTGGGC
GTCGTAAAGCAAAACCAGCAGGAGGAAGGAGACAGCAGTGTTTAG

Upstream 100 bases:

>100_bases
TCGACGAAAAGATTGCACGTCTAACCGCAGAACTGACTGCTGCATTGGACGAGTCTGCACGTTTGGACGCTGTCGTCCGC
GAACAGCTGGGGAGGTTGAA

Downstream 100 bases:

>100_bases
TGAAGACATGCTAGAGCGACTGGCTTTGGAAAAGCTGGGTGATAACGACTGGCAGCCACTCCACGGCACCGCAGTCGCGC
CGGGCTCTGGTGAGCGCCAA

Product: putative type I restriction/modification system DNA specificity protein

Products: NA

Alternate protein names: S.MjaXP; Type I restriction enzyme MjaXP specificity protein; S protein [H]

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MRIQIGELIRSGVLELGDGYRTKRSELSQFGYAIVRAGDVVEIGVTASDSEFVDQRFDKAIGRKTVRLGDVVITTKGTVG
RVAEVSKVPNAGLAVYSPQVCYLRSLQPSILHQRYLKYLLMSPATKYSISTFASSSDMAPYLSLSDFKSMVVDLPSLEDQ
RAIADVLGALDDKIAENQRVIQLSEQLAMTFYRSTEKSESSLTFADVAGIYGGGTPSTKNPDFWDGEIRWATPTDITALK
GPWLCGTARSITEEGLSKSSGSLHPEGSILMTSRATVGHVAFIDAPTTTNQGFINLVPQEAYRYWLYFQLKQRTSEFIAW
ANGATFLELSRGTFKKLPFQACAETELEKFNSVVAPLMKRVLKAQKENQVLAATRDELLPLLMNGKITVAEAKEAAGDVG
VVKQNQQEEGDSSV

Sequences:

>Translated_414_residues
MRIQIGELIRSGVLELGDGYRTKRSELSQFGYAIVRAGDVVEIGVTASDSEFVDQRFDKAIGRKTVRLGDVVITTKGTVG
RVAEVSKVPNAGLAVYSPQVCYLRSLQPSILHQRYLKYLLMSPATKYSISTFASSSDMAPYLSLSDFKSMVVDLPSLEDQ
RAIADVLGALDDKIAENQRVIQLSEQLAMTFYRSTEKSESSLTFADVAGIYGGGTPSTKNPDFWDGEIRWATPTDITALK
GPWLCGTARSITEEGLSKSSGSLHPEGSILMTSRATVGHVAFIDAPTTTNQGFINLVPQEAYRYWLYFQLKQRTSEFIAW
ANGATFLELSRGTFKKLPFQACAETELEKFNSVVAPLMKRVLKAQKENQVLAATRDELLPLLMNGKITVAEAKEAAGDVG
VVKQNQQEEGDSSV
>Mature_414_residues
MRIQIGELIRSGVLELGDGYRTKRSELSQFGYAIVRAGDVVEIGVTASDSEFVDQRFDKAIGRKTVRLGDVVITTKGTVG
RVAEVSKVPNAGLAVYSPQVCYLRSLQPSILHQRYLKYLLMSPATKYSISTFASSSDMAPYLSLSDFKSMVVDLPSLEDQ
RAIADVLGALDDKIAENQRVIQLSEQLAMTFYRSTEKSESSLTFADVAGIYGGGTPSTKNPDFWDGEIRWATPTDITALK
GPWLCGTARSITEEGLSKSSGSLHPEGSILMTSRATVGHVAFIDAPTTTNQGFINLVPQEAYRYWLYFQLKQRTSEFIAW
ANGATFLELSRGTFKKLPFQACAETELEKFNSVVAPLMKRVLKAQKENQVLAATRDELLPLLMNGKITVAEAKEAAGDVG
VVKQNQQEEGDSSV

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 45368; Mature: 45368

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIQIGELIRSGVLELGDGYRTKRSELSQFGYAIVRAGDVVEIGVTASDSEFVDQRFDKA
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCEEEEEEECCCHHHHHHHHHHH
IGRKTVRLGDVVITTKGTVGRVAEVSKVPNAGLAVYSPQVCYLRSLQPSILHQRYLKYLL
HCCCEEEECCEEEEECCCCHHHHHHHCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHH
MSPATKYSISTFASSSDMAPYLSLSDFKSMVVDLPSLEDQRAIADVLGALDDKIAENQRV
HCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHH
IQLSEQLAMTFYRSTEKSESSLTFADVAGIYGGGTPSTKNPDFWDGEIRWATPTDITALK
HHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEECC
GPWLCGTARSITEEGLSKSSGSLHPEGSILMTSRATVGHVAFIDAPTTTNQGFINLVPQE
CCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEECCHH
AYRYWLYFQLKQRTSEFIAWANGATFLELSRGTFKKLPFQACAETELEKFNSVVAPLMKR
HEEEEHEEEEHHHHHHHEEECCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VLKAQKENQVLAATRDELLPLLMNGKITVAEAKEAAGDVGVVKQNQQEEGDSSV
HHHHHHCCCEEEHHHHHHHHHHHCCEEEEEECHHHCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MRIQIGELIRSGVLELGDGYRTKRSELSQFGYAIVRAGDVVEIGVTASDSEFVDQRFDKA
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCEEEEEEECCCHHHHHHHHHHH
IGRKTVRLGDVVITTKGTVGRVAEVSKVPNAGLAVYSPQVCYLRSLQPSILHQRYLKYLL
HCCCEEEECCEEEEECCCCHHHHHHHCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHH
MSPATKYSISTFASSSDMAPYLSLSDFKSMVVDLPSLEDQRAIADVLGALDDKIAENQRV
HCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHH
IQLSEQLAMTFYRSTEKSESSLTFADVAGIYGGGTPSTKNPDFWDGEIRWATPTDITALK
HHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEECC
GPWLCGTARSITEEGLSKSSGSLHPEGSILMTSRATVGHVAFIDAPTTTNQGFINLVPQE
CCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEECCHH
AYRYWLYFQLKQRTSEFIAWANGATFLELSRGTFKKLPFQACAETELEKFNSVVAPLMKR
HEEEEHEEEEHHHHHHHEEECCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VLKAQKENQVLAATRDELLPLLMNGKITVAEAKEAAGDVGVVKQNQQEEGDSSV
HHHHHHCCCEEEHHHHHHHHHHHCCEEEEEECHHHCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]