| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234842
Identifier: 38234842
GI number: 38234842
Start: 2403526
End: 2404152
Strand: Reverse
Name: 38234842
Synonym: DIP2307
Alternate gene names: NA
Gene position: 2404152-2403526 (Counterclockwise)
Preceding gene: 38234843
Following gene: 38234841
Centisome position: 96.61
GC content: 57.26
Gene sequence:
>627_bases ATGCTAGTGCTAGCAGAAGGAATTTTTGGGCTCATGGGAACGGACATTGCTAGCGCCCACCATGAGCTCAGGCGGCGCTT GCGATCGTACATTCCTAGCCATAGGGTGGCGGGGATGTTGGAGAAGATGGCATCGAAGCAGATAGTTATGGTCGCCCTCA CCCTTGTGATGATGGTGGTGGTATCGATGACGCTGCTTAAGAGTGAGTTTTCGGTGGCGGGACTGTGGGAACCTTCGCAA CATCAGGTGCGCAGGGTAGAGCTGCAGCCGTTTCGGGGGTGGAGTTACCAAGAATGGTGGCGGCCATGGGTGGATTCCTT TGGCAATGTGGCGCTGTTTGTTCCGTGGGGATACCTGTTGGCGTTGCTGGGGTGGCGGTTGCGGTGGCCTGTGGTCGTGG CGACGCTGGCGTCGATAAGCCTGAGTGCCGGTATTGAAACATTGCAGTTTATTTTTGCGCGGGGGTATTCCGACATTGAC GACGTAGTGTTCAACTCGCTCGGTGGACTGTTGGGGGCGTTGGTGGTGTCGCGTTCGTCGTGGGCGAGTAGTGGCCGTGC TGTACTCGTGTTTTCCGCATTGTCGGTGGTGGCGTTGGCGGTGTTTGGAATGAGTGCGGGCGCTTGA
Upstream 100 bases:
>100_bases AATCAACAAGGCCATCGCTGAGGCGAGTAGTCCAGAAGCCGCACTCGAGGCCTATATAAAGGAAAACCTGCGGATTGCTG CTGCTGAGAACCACGGTTGG
Downstream 100 bases:
>100_bases CTATGTGGTGACATAAGTTGTTGAAGTTGGGCGTGTTGCTCCTGTGACTTGTGTGAAAGTTGTGTATTGTGCGGGGCGTG AAGAAAAAGAGCCATTTGCT
Product: putative integral membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MLVLAEGIFGLMGTDIASAHHELRRRLRSYIPSHRVAGMLEKMASKQIVMVALTLVMMVVVSMTLLKSEFSVAGLWEPSQ HQVRRVELQPFRGWSYQEWWRPWVDSFGNVALFVPWGYLLALLGWRLRWPVVVATLASISLSAGIETLQFIFARGYSDID DVVFNSLGGLLGALVVSRSSWASSGRAVLVFSALSVVALAVFGMSAGA
Sequences:
>Translated_208_residues MLVLAEGIFGLMGTDIASAHHELRRRLRSYIPSHRVAGMLEKMASKQIVMVALTLVMMVVVSMTLLKSEFSVAGLWEPSQ HQVRRVELQPFRGWSYQEWWRPWVDSFGNVALFVPWGYLLALLGWRLRWPVVVATLASISLSAGIETLQFIFARGYSDID DVVFNSLGGLLGALVVSRSSWASSGRAVLVFSALSVVALAVFGMSAGA >Mature_208_residues MLVLAEGIFGLMGTDIASAHHELRRRLRSYIPSHRVAGMLEKMASKQIVMVALTLVMMVVVSMTLLKSEFSVAGLWEPSQ HQVRRVELQPFRGWSYQEWWRPWVDSFGNVALFVPWGYLLALLGWRLRWPVVVATLASISLSAGIETLQFIFARGYSDID DVVFNSLGGLLGALVVSRSSWASSGRAVLVFSALSVVALAVFGMSAGA
Specific function: Unknown
COG id: COG4767
COG function: function code V; Glycopeptide antibiotics resistance protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22929; Mature: 22929
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLAEGIFGLMGTDIASAHHELRRRLRSYIPSHRVAGMLEKMASKQIVMVALTLVMMVV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSMTLLKSEFSVAGLWEPSQHQVRRVELQPFRGWSYQEWWRPWVDSFGNVALFVPWGYLL HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEECHHHHH ALLGWRLRWPVVVATLASISLSAGIETLQFIFARGYSDIDDVVFNSLGGLLGALVVSRSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH WASSGRAVLVFSALSVVALAVFGMSAGA HCCCCCEEHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLVLAEGIFGLMGTDIASAHHELRRRLRSYIPSHRVAGMLEKMASKQIVMVALTLVMMVV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSMTLLKSEFSVAGLWEPSQHQVRRVELQPFRGWSYQEWWRPWVDSFGNVALFVPWGYLL HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEECHHHHH ALLGWRLRWPVVVATLASISLSAGIETLQFIFARGYSDIDDVVFNSLGGLLGALVVSRSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH WASSGRAVLVFSALSVVALAVFGMSAGA HCCCCCEEHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA