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The map label for this gene is dedA [H]

Identifier: 38234837

GI number: 38234837

Start: 2398584

End: 2399222

Strand: Direct

Name: dedA [H]

Synonym: DIP2302

Alternate gene names: 38234837

Gene position: 2398584-2399222 (Clockwise)

Preceding gene: 38234834

Following gene: 38234839

Centisome position: 96.38

GC content: 56.81

Gene sequence:

>639_bases
GTGACCGATTTCCTGCACATGCTGCACGACACCCAAGGTTTGCTCACCAGTGTTGGGCTCGTTGGCCTTGGCCTGATCGT
CTTCGCTGAGACCGGCATCCTGATTGGATTCTTCCTGCCGGGAGATTCCCTACTATTTATGGCGGGCATGCTTGCCGCCG
CTGAAAACCCCATCGCCCCATTGTGGCTGGTGTGCCTCACCGTGGGCATTTGCGCCTTTGTGGGCAACGAGGTGGGCTAC
TTCTTGGGTAAAAAAGTAGGCCCTGCCATTATTAACAGCTGGGCGGGCCGCAAGATCGGTATTGAGCGGGTTCGCGCCGC
CGAGGAATTCTTTGTTAAACACGGCGCATCGGCAGTGTTCTTGGGGCGCTTTATCCCAATCGTGCGCACCCTCGTCCCGG
TGCTCGCTGGCATGAACAGCATGAACTACCGCAAGTTCTCCATCTATAACTTGGTGGGCGCTTTGGTCTGGGGCATGGGT
GTGCCAGTTCTGGGTTACCTTCTTGGTGGTATCCCCTTCGTGCGCGACAACATCGAGGCAATTCTGATCGGTGTGATCGT
GGTGTCGGTTCTGCCGGTGGCGCTGCAGTTTGTAAAGAAGCAAAAGCCGGTGCGCACTGTGGAGCAGGGAGAGCTTTAA

Upstream 100 bases:

>100_bases
AGCGAACAAAAGGGTTTAAAGTTTGGTAAGTCTGATACTTTTAGCGACCACCCCGCACCCCACACCATGTGCGGAGGGTC
GCCTTTTTGAGAGGTTCCTC

Downstream 100 bases:

>100_bases
TACCGACGAATACCTACTGTTGACACATCACTGTGAGTAGTTCGTGCCAAAACTTTTTCACCTCCGCAGCATTTCCGCAG
GTCGGAGATATTAGAAAAGG

Product: putative integral membrane protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTDFLHMLHDTQGLLTSVGLVGLGLIVFAETGILIGFFLPGDSLLFMAGMLAAAENPIAPLWLVCLTVGICAFVGNEVGY
FLGKKVGPAIINSWAGRKIGIERVRAAEEFFVKHGASAVFLGRFIPIVRTLVPVLAGMNSMNYRKFSIYNLVGALVWGMG
VPVLGYLLGGIPFVRDNIEAILIGVIVVSVLPVALQFVKKQKPVRTVEQGEL

Sequences:

>Translated_212_residues
MTDFLHMLHDTQGLLTSVGLVGLGLIVFAETGILIGFFLPGDSLLFMAGMLAAAENPIAPLWLVCLTVGICAFVGNEVGY
FLGKKVGPAIINSWAGRKIGIERVRAAEEFFVKHGASAVFLGRFIPIVRTLVPVLAGMNSMNYRKFSIYNLVGALVWGMG
VPVLGYLLGGIPFVRDNIEAILIGVIVVSVLPVALQFVKKQKPVRTVEQGEL
>Mature_211_residues
TDFLHMLHDTQGLLTSVGLVGLGLIVFAETGILIGFFLPGDSLLFMAGMLAAAENPIAPLWLVCLTVGICAFVGNEVGYF
LGKKVGPAIINSWAGRKIGIERVRAAEEFFVKHGASAVFLGRFIPIVRTLVPVLAGMNSMNYRKFSIYNLVGALVWGMGV
PVLGYLLGGIPFVRDNIEAILIGVIVVSVLPVALQFVKKQKPVRTVEQGEL

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=178, Percent_Identity=39.3258426966292, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1789481, Length=148, Percent_Identity=38.5135135135135, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789384, Length=165, Percent_Identity=30.3030303030303, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22784; Mature: 22653

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFLHMLHDTQGLLTSVGLVGLGLIVFAETGILIGFFLPGDSLLFMAGMLAAAENPIAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCHH
LWLVCLTVGICAFVGNEVGYFLGKKVGPAIINSWAGRKIGIERVRAAEEFFVKHGASAVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
LGRFIPIVRTLVPVLAGMNSMNYRKFSIYNLVGALVWGMGVPVLGYLLGGIPFVRDNIEA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ILIGVIVVSVLPVALQFVKKQKPVRTVEQGEL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TDFLHMLHDTQGLLTSVGLVGLGLIVFAETGILIGFFLPGDSLLFMAGMLAAAENPIAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCHH
LWLVCLTVGICAFVGNEVGYFLGKKVGPAIINSWAGRKIGIERVRAAEEFFVKHGASAVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
LGRFIPIVRTLVPVLAGMNSMNYRKFSIYNLVGALVWGMGVPVLGYLLGGIPFVRDNIEA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ILIGVIVVSVLPVALQFVKKQKPVRTVEQGEL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]