| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234784
Identifier: 38234784
GI number: 38234784
Start: 2337505
End: 2338221
Strand: Direct
Name: 38234784
Synonym: DIP2248
Alternate gene names: NA
Gene position: 2337505-2338221 (Clockwise)
Preceding gene: 38234783
Following gene: 38234786
Centisome position: 93.93
GC content: 58.02
Gene sequence:
>717_bases GTGAACACTCGCCGGCTGCGTTACGAGGTCGCGCTCGTCCTCGCCTTGACCTTCGGTATGGCAGGGCTGCGCTCCATTTT CACGCTTATCGACGCCCTCTCCGCCCCACTGAACACCCAAAGCGTGACGCTCAACGCCCCACGCGCCACCGCCGCCTGGC TCGACTTCGCCCTCCAACTATGCGGCGCTGCCACCATCATGACGTGGGGATTACTTGCCCTCTTCCTCCTCGGCGAACGC CTAGAAAAACCTCGAGGCGCCGACTTTAGCTGGGGTGTGGGCCTGGCCGCCCTCATCGGAATCCCAGGTCTGGGCTTCTA CTATGCGGCGGTTCACCTCGGGCTAAGCAAAGAAGTTATCCCCTCAACACTGGAACACTTCTGGACCATCCCCGTTTTGC TGCTGTTTTCTTTCGCCCACGCCTTCGCCGAAGAAATAGTCGTGGTCAAATGGCTGAGCACAAGGCTCAACCAACTCGGC CACGGCCTTATTTTCACCTTGGTAGTCAGTGCCCTGCTGCGTGGCAGCTACCACCTCTACCAAGGCGTTTCCGCAGGTAT CGGCAACGTGATCATGGGGCTTATCTATGGCTGGTTTTATCTGCGCTACCGCCCCACATCCATCTGGCCACTGATCATCG GCCACTTCCTTATCGATGCAGTCGCATTTGTCGGCTATACGCTTGCCACGATGCTCAACATCAACGTTTCTTGGTAA
Upstream 100 bases:
>100_bases CTGGGGCGGCGGCGCTCAGCATGCCGTATGCGGGGCGCAACATCCACCTAGGGGCGCTTCGTCGCAACGTACCAGAGCTT TTCGGATTGGCAGGTGACTT
Downstream 100 bases:
>100_bases GAAGCTTCACCATGAATACGCCGATGGCCATCGCACCAATTCCGAAAAGTATGTCTCCGGGGACACGCAACCACCGTATC AGCGTCAATACTGGGCTGTA
Product: putative integral membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein; CAAX Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein; CAAX Amino Protease Family Protein; Protease; CAAX Amino Terminal Protease; CAAX Amino Protease
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MNTRRLRYEVALVLALTFGMAGLRSIFTLIDALSAPLNTQSVTLNAPRATAAWLDFALQLCGAATIMTWGLLALFLLGER LEKPRGADFSWGVGLAALIGIPGLGFYYAAVHLGLSKEVIPSTLEHFWTIPVLLLFSFAHAFAEEIVVVKWLSTRLNQLG HGLIFTLVVSALLRGSYHLYQGVSAGIGNVIMGLIYGWFYLRYRPTSIWPLIIGHFLIDAVAFVGYTLATMLNINVSW
Sequences:
>Translated_238_residues MNTRRLRYEVALVLALTFGMAGLRSIFTLIDALSAPLNTQSVTLNAPRATAAWLDFALQLCGAATIMTWGLLALFLLGER LEKPRGADFSWGVGLAALIGIPGLGFYYAAVHLGLSKEVIPSTLEHFWTIPVLLLFSFAHAFAEEIVVVKWLSTRLNQLG HGLIFTLVVSALLRGSYHLYQGVSAGIGNVIMGLIYGWFYLRYRPTSIWPLIIGHFLIDAVAFVGYTLATMLNINVSW >Mature_238_residues MNTRRLRYEVALVLALTFGMAGLRSIFTLIDALSAPLNTQSVTLNAPRATAAWLDFALQLCGAATIMTWGLLALFLLGER LEKPRGADFSWGVGLAALIGIPGLGFYYAAVHLGLSKEVIPSTLEHFWTIPVLLLFSFAHAFAEEIVVVKWLSTRLNQLG HGLIFTLVVSALLRGSYHLYQGVSAGIGNVIMGLIYGWFYLRYRPTSIWPLIIGHFLIDAVAFVGYTLATMLNINVSW
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26174; Mature: 26174
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRRLRYEVALVLALTFGMAGLRSIFTLIDALSAPLNTQSVTLNAPRATAAWLDFALQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH CGAATIMTWGLLALFLLGERLEKPRGADFSWGVGLAALIGIPGLGFYYAAVHLGLSKEVI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH PSTLEHFWTIPVLLLFSFAHAFAEEIVVVKWLSTRLNQLGHGLIFTLVVSALLRGSYHLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH QGVSAGIGNVIMGLIYGWFYLRYRPTSIWPLIIGHFLIDAVAFVGYTLATMLNINVSW HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNTRRLRYEVALVLALTFGMAGLRSIFTLIDALSAPLNTQSVTLNAPRATAAWLDFALQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH CGAATIMTWGLLALFLLGERLEKPRGADFSWGVGLAALIGIPGLGFYYAAVHLGLSKEVI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH PSTLEHFWTIPVLLLFSFAHAFAEEIVVVKWLSTRLNQLGHGLIFTLVVSALLRGSYHLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH QGVSAGIGNVIMGLIYGWFYLRYRPTSIWPLIIGHFLIDAVAFVGYTLATMLNINVSW HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA