Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

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The map label for this gene is 38234784

Identifier: 38234784

GI number: 38234784

Start: 2337505

End: 2338221

Strand: Direct

Name: 38234784

Synonym: DIP2248

Alternate gene names: NA

Gene position: 2337505-2338221 (Clockwise)

Preceding gene: 38234783

Following gene: 38234786

Centisome position: 93.93

GC content: 58.02

Gene sequence:

>717_bases
GTGAACACTCGCCGGCTGCGTTACGAGGTCGCGCTCGTCCTCGCCTTGACCTTCGGTATGGCAGGGCTGCGCTCCATTTT
CACGCTTATCGACGCCCTCTCCGCCCCACTGAACACCCAAAGCGTGACGCTCAACGCCCCACGCGCCACCGCCGCCTGGC
TCGACTTCGCCCTCCAACTATGCGGCGCTGCCACCATCATGACGTGGGGATTACTTGCCCTCTTCCTCCTCGGCGAACGC
CTAGAAAAACCTCGAGGCGCCGACTTTAGCTGGGGTGTGGGCCTGGCCGCCCTCATCGGAATCCCAGGTCTGGGCTTCTA
CTATGCGGCGGTTCACCTCGGGCTAAGCAAAGAAGTTATCCCCTCAACACTGGAACACTTCTGGACCATCCCCGTTTTGC
TGCTGTTTTCTTTCGCCCACGCCTTCGCCGAAGAAATAGTCGTGGTCAAATGGCTGAGCACAAGGCTCAACCAACTCGGC
CACGGCCTTATTTTCACCTTGGTAGTCAGTGCCCTGCTGCGTGGCAGCTACCACCTCTACCAAGGCGTTTCCGCAGGTAT
CGGCAACGTGATCATGGGGCTTATCTATGGCTGGTTTTATCTGCGCTACCGCCCCACATCCATCTGGCCACTGATCATCG
GCCACTTCCTTATCGATGCAGTCGCATTTGTCGGCTATACGCTTGCCACGATGCTCAACATCAACGTTTCTTGGTAA

Upstream 100 bases:

>100_bases
CTGGGGCGGCGGCGCTCAGCATGCCGTATGCGGGGCGCAACATCCACCTAGGGGCGCTTCGTCGCAACGTACCAGAGCTT
TTCGGATTGGCAGGTGACTT

Downstream 100 bases:

>100_bases
GAAGCTTCACCATGAATACGCCGATGGCCATCGCACCAATTCCGAAAAGTATGTCTCCGGGGACACGCAACCACCGTATC
AGCGTCAATACTGGGCTGTA

Product: putative integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein; CAAX Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein; CAAX Amino Protease Family Protein; Protease; CAAX Amino Terminal Protease; CAAX Amino Protease

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNTRRLRYEVALVLALTFGMAGLRSIFTLIDALSAPLNTQSVTLNAPRATAAWLDFALQLCGAATIMTWGLLALFLLGER
LEKPRGADFSWGVGLAALIGIPGLGFYYAAVHLGLSKEVIPSTLEHFWTIPVLLLFSFAHAFAEEIVVVKWLSTRLNQLG
HGLIFTLVVSALLRGSYHLYQGVSAGIGNVIMGLIYGWFYLRYRPTSIWPLIIGHFLIDAVAFVGYTLATMLNINVSW

Sequences:

>Translated_238_residues
MNTRRLRYEVALVLALTFGMAGLRSIFTLIDALSAPLNTQSVTLNAPRATAAWLDFALQLCGAATIMTWGLLALFLLGER
LEKPRGADFSWGVGLAALIGIPGLGFYYAAVHLGLSKEVIPSTLEHFWTIPVLLLFSFAHAFAEEIVVVKWLSTRLNQLG
HGLIFTLVVSALLRGSYHLYQGVSAGIGNVIMGLIYGWFYLRYRPTSIWPLIIGHFLIDAVAFVGYTLATMLNINVSW
>Mature_238_residues
MNTRRLRYEVALVLALTFGMAGLRSIFTLIDALSAPLNTQSVTLNAPRATAAWLDFALQLCGAATIMTWGLLALFLLGER
LEKPRGADFSWGVGLAALIGIPGLGFYYAAVHLGLSKEVIPSTLEHFWTIPVLLLFSFAHAFAEEIVVVKWLSTRLNQLG
HGLIFTLVVSALLRGSYHLYQGVSAGIGNVIMGLIYGWFYLRYRPTSIWPLIIGHFLIDAVAFVGYTLATMLNINVSW

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26174; Mature: 26174

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRRLRYEVALVLALTFGMAGLRSIFTLIDALSAPLNTQSVTLNAPRATAAWLDFALQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
CGAATIMTWGLLALFLLGERLEKPRGADFSWGVGLAALIGIPGLGFYYAAVHLGLSKEVI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH
PSTLEHFWTIPVLLLFSFAHAFAEEIVVVKWLSTRLNQLGHGLIFTLVVSALLRGSYHLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH
QGVSAGIGNVIMGLIYGWFYLRYRPTSIWPLIIGHFLIDAVAFVGYTLATMLNINVSW
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNTRRLRYEVALVLALTFGMAGLRSIFTLIDALSAPLNTQSVTLNAPRATAAWLDFALQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
CGAATIMTWGLLALFLLGERLEKPRGADFSWGVGLAALIGIPGLGFYYAAVHLGLSKEVI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH
PSTLEHFWTIPVLLLFSFAHAFAEEIVVVKWLSTRLNQLGHGLIFTLVVSALLRGSYHLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH
QGVSAGIGNVIMGLIYGWFYLRYRPTSIWPLIIGHFLIDAVAFVGYTLATMLNINVSW
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA