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The map label for this gene is ygbT [H]

Identifier: 38234755

GI number: 38234755

Start: 2304729

End: 2305688

Strand: Direct

Name: ygbT [H]

Synonym: DIP2214

Alternate gene names: 38234755

Gene position: 2304729-2305688 (Clockwise)

Preceding gene: 38234754

Following gene: 38234756

Centisome position: 92.61

GC content: 45.31

Gene sequence:

>960_bases
ATGCCCTATTCCCATGACGCAATTGCGTTCAGTACAATTCCCGCAAGCCATCAAATCAGGCTTGAAGATCGTCTTTCTTT
CCTATATTTGGAATATTGTCTGATTCGTCAAGACCGTACTGGTGTAATCGCAATCCAAAATGGTCACAATGAAAGCTCCG
ACGAAGAAGAAAAATTAGAACCTCAAATACTTCGAATTCAGTTACCGGTAGCGAGTTTGGCAGTTCTTTGTTTAGGACCA
GGGACTTCAATTTCTAATGCAGCAATGACTTCCTGCACTAGGTCAGGCTGTACCGTCATTTTTACCGGAGGAGGCGGAGT
CAATGCTTATTCACATGCAACTCCGCTAACGTCGACAGCGAAGTGGGCGATAGCGCAAGCTTGTTTGGTTTCAAACACCG
AGTATCAGAAAAAAGCAGCGCTTGCCTTTTATAAAAGACAATTCGGAGGAAACGCAATAACCGGTGGGTCGATCTCTGTA
ATGCGTGGGTTAGAAGGACGCATCATGCGCAACACTTATAGAGAAAATGCAAAGAAGGCAGGCATCCGAGGTTTTAAGCG
CGATACAAAAGCTGCTGACCCAGTTAATGTCGGCCTTAATATCTCAAACTCAATCCTCTACGGTGCTGCAGCAACCGTTT
GTACTGCCATCGGTGTAAATCCTGCATTAGGAATAATTCACCGCGGTGATACAAGATCGCTCCTGTTTGATCTTGCAGAT
CTTTACAAAGCTTCTATTGTCATCCCCTTAGTGTTTTCCCACGCAAAAGACGAAGATCCTGTTACTAACATCCGTCGGCA
TCTCCGCCGTGAGATCCATTCAAGAAAAATAATGGCAGGTATGCTCGAAGCACTAATGGAGGTGCTGACACCGTATCTTC
CAAATCGTAATGACGATCGGCTAATCGGCGACAGTGACGAAGTCAAAGGGCACATACAGTATGGCAAGGAGATTAACTAG

Upstream 100 bases:

>100_bases
TCATCAAAAACCGTGCTAGCAGGTTTCTACTTCCTGCCTAAGGCGCAAAATTTCTATAGCAAAAATCTCGGTTTTATCTG
GCCTGAGGAGAAAGATTAAT

Downstream 100 bases:

>100_bases
ATGTTCGCTGTACTTTACCTTCAGGCAGCACCTGATCATCTCCTTGGTTACGTCACCCGTTTCCTTACTGAAGCGGATAC
AAGCATCTATGTTGGAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MPYSHDAIAFSTIPASHQIRLEDRLSFLYLEYCLIRQDRTGVIAIQNGHNESSDEEEKLEPQILRIQLPVASLAVLCLGP
GTSISNAAMTSCTRSGCTVIFTGGGGVNAYSHATPLTSTAKWAIAQACLVSNTEYQKKAALAFYKRQFGGNAITGGSISV
MRGLEGRIMRNTYRENAKKAGIRGFKRDTKAADPVNVGLNISNSILYGAAATVCTAIGVNPALGIIHRGDTRSLLFDLAD
LYKASIVIPLVFSHAKDEDPVTNIRRHLRREIHSRKIMAGMLEALMEVLTPYLPNRNDDRLIGDSDEVKGHIQYGKEIN

Sequences:

>Translated_319_residues
MPYSHDAIAFSTIPASHQIRLEDRLSFLYLEYCLIRQDRTGVIAIQNGHNESSDEEEKLEPQILRIQLPVASLAVLCLGP
GTSISNAAMTSCTRSGCTVIFTGGGGVNAYSHATPLTSTAKWAIAQACLVSNTEYQKKAALAFYKRQFGGNAITGGSISV
MRGLEGRIMRNTYRENAKKAGIRGFKRDTKAADPVNVGLNISNSILYGAAATVCTAIGVNPALGIIHRGDTRSLLFDLAD
LYKASIVIPLVFSHAKDEDPVTNIRRHLRREIHSRKIMAGMLEALMEVLTPYLPNRNDDRLIGDSDEVKGHIQYGKEIN
>Mature_318_residues
PYSHDAIAFSTIPASHQIRLEDRLSFLYLEYCLIRQDRTGVIAIQNGHNESSDEEEKLEPQILRIQLPVASLAVLCLGPG
TSISNAAMTSCTRSGCTVIFTGGGGVNAYSHATPLTSTAKWAIAQACLVSNTEYQKKAALAFYKRQFGGNAITGGSISVM
RGLEGRIMRNTYRENAKKAGIRGFKRDTKAADPVNVGLNISNSILYGAAATVCTAIGVNPALGIIHRGDTRSLLFDLADL
YKASIVIPLVFSHAKDEDPVTNIRRHLRREIHSRKIMAGMLEALMEVLTPYLPNRNDDRLIGDSDEVKGHIQYGKEIN

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789113, Length=280, Percent_Identity=28.2142857142857, Blast_Score=115, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019851 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 34833; Mature: 34702

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSHDAIAFSTIPASHQIRLEDRLSFLYLEYCLIRQDRTGVIAIQNGHNESSDEEEKLE
CCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCC
PQILRIQLPVASLAVLCLGPGTSISNAAMTSCTRSGCTVIFTGGGGVNAYSHATPLTSTA
CEEEEEEECHHHEEEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHH
KWAIAQACLVSNTEYQKKAALAFYKRQFGGNAITGGSISVMRGLEGRIMRNTYRENAKKA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHH
GIRGFKRDTKAADPVNVGLNISNSILYGAAATVCTAIGVNPALGIIHRGDTRSLLFDLAD
CCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
LYKASIVIPLVFSHAKDEDPVTNIRRHLRREIHSRKIMAGMLEALMEVLTPYLPNRNDDR
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LIGDSDEVKGHIQYGKEIN
CCCCCHHCCEEECCCCCCC
>Mature Secondary Structure 
PYSHDAIAFSTIPASHQIRLEDRLSFLYLEYCLIRQDRTGVIAIQNGHNESSDEEEKLE
CCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCC
PQILRIQLPVASLAVLCLGPGTSISNAAMTSCTRSGCTVIFTGGGGVNAYSHATPLTSTA
CEEEEEEECHHHEEEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHH
KWAIAQACLVSNTEYQKKAALAFYKRQFGGNAITGGSISVMRGLEGRIMRNTYRENAKKA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHH
GIRGFKRDTKAADPVNVGLNISNSILYGAAATVCTAIGVNPALGIIHRGDTRSLLFDLAD
CCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
LYKASIVIPLVFSHAKDEDPVTNIRRHLRREIHSRKIMAGMLEALMEVLTPYLPNRNDDR
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LIGDSDEVKGHIQYGKEIN
CCCCCHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]